RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 C3orf22Q8N5N4 141 aa12.97□□□□□ -0.33
UBR3-201ENST00000272793 FAM216BQ8N7L0 139 aa12.97□□□□□ -0.33
UBR3-201ENST00000272793 ETDCA0A1B0GVM5 59 aa12.97□□□□□ -0.33
UBR3-201ENST00000272793 CCL3L1P16619 93 aa12.97□□□□□ -0.33
UBR3-201ENST00000272793 IGF2BP2-AS1Q96M15 143 aa12.97□□□□□ -0.33
UBR3-201ENST00000272793 FOXE3Q13461 319 aa12.97□□□□□ -0.33
UBR3-201ENST00000272793 MLST8Q9BVC4 326 aa12.97□□□□□ -0.33
UBR3-201ENST00000272793 FOXS1O43638 330 aa12.97□□□□□ -0.33
UBR3-201ENST00000272793 PIP4P2Q8N4L2 257 aa12.97□□□□□ -0.33
UBR3-201ENST00000272793 SIGLEC12Q96PQ1 595 aa12.97□□□□□ -0.33
UBR3-201ENST00000272793 LINC00312Q9Y6C7 94 aa12.97□□□□□ -0.33
UBR3-201ENST00000272793 FAM27E3Q08E93 113 aa12.97□□□□□ -0.33
UBR3-201ENST00000272793 IGLV1-36A0A0B4J1U3 117 aa12.96□□□□□ -0.33
UBR3-201ENST00000272793 PKIGQ9Y2B9 76 aa12.96□□□□□ -0.33
UBR3-201ENST00000272793 Q71RC1 249 aaPredicted RBP12.96□□□□□ -0.33
UBR3-201ENST00000272793 VSIG2Q96IQ7 327 aa12.96□□□□□ -0.33
UBR3-201ENST00000272793 RTBDNQ9BSG5 229 aaPredicted RBP12.96□□□□□ -0.33
UBR3-201ENST00000272793 USP54Q70EL1 1684 aa12.96□□□□□ -0.33
UBR3-201ENST00000272793 I3L3M4 83 aa12.96□□□□□ -0.33
UBR3-201ENST00000272793 TAX1BP3O14907 124 aa12.96□□□□□ -0.33
UBR3-201ENST00000272793 K7EP13 123 aa12.96□□□□□ -0.34
UBR3-201ENST00000272793 HIGD2BQ4VC39 106 aa12.96□□□□□ -0.34
UBR3-201ENST00000272793 IGHV3-38A0A0C4DH36 116 aa12.96□□□□□ -0.34
UBR3-201ENST00000272793 FOXD3Q9UJU5 478 aaPredicted RBP12.96□□□□□ -0.34
UBR3-201ENST00000272793 TEX38Q6PEX7 206 aa12.95□□□□□ -0.34
UBR3-201ENST00000272793 Q6ZT83 130 aa12.95□□□□□ -0.34
UBR3-201ENST00000272793 ZNF525Q8N782 197 aa12.95□□□□□ -0.34
UBR3-201ENST00000272793 C12orf77C9JDV5 145 aa12.95□□□□□ -0.34
UBR3-201ENST00000272793 IGKV1OR2-108A0A075B7D4 117 aa12.95□□□□□ -0.34
UBR3-201ENST00000272793 NREPQ16612 68 aa12.95□□□□□ -0.34
UBR3-201ENST00000272793 ETV2O00321 342 aaPredicted RBP12.95□□□□□ -0.34
UBR3-201ENST00000272793 CELA3AP09093 270 aa12.95□□□□□ -0.34
UBR3-201ENST00000272793 XCL1P47992 114 aa12.95□□□□□ -0.34
UBR3-201ENST00000272793 ZNF329Q86UD4 541 aa12.95□□□□□ -0.34
UBR3-201ENST00000272793 ADAMTS9Q9P2N4 1935 aa12.95□□□□□ -0.34
UBR3-201ENST00000272793 COX7B2Q8TF08 81 aa12.94□□□□□ -0.34
UBR3-201ENST00000272793 TMEM133Q9H2Q1 129 aa12.94□□□□□ -0.34
UBR3-201ENST00000272793 A0A0G2JK05 382 aa12.94□□□□□ -0.34
UBR3-201ENST00000272793 M0R1W7 72 aa12.94□□□□□ -0.34
UBR3-201ENST00000272793 RNF222A6NCQ9 220 aa12.94□□□□□ -0.34
UBR3-201ENST00000272793 RNASE13Q5GAN3 156 aaKnown RBP12.94□□□□□ -0.34
UBR3-201ENST00000272793 K7ERJ3 54 aa12.93□□□□□ -0.34
UBR3-201ENST00000272793 HLA-DRB4P13762 266 aa12.93□□□□□ -0.34
UBR3-201ENST00000272793 HLA-DRB4X5D2U9 266 aa12.93□□□□□ -0.34
UBR3-201ENST00000272793 IL9P15248 144 aa12.93□□□□□ -0.34
UBR3-201ENST00000272793 WIPF2Q8TF74 440 aaPredicted RBP12.93□□□□□ -0.34
UBR3-201ENST00000272793 BCORQ6W2J9 1755 aa12.93□□□□□ -0.34
UBR3-201ENST00000272793 FAM236AA0A1B0GUQ0 79 aa12.93□□□□□ -0.34
UBR3-201ENST00000272793 FAM236BA0A1B0GV22 79 aa12.93□□□□□ -0.34
UBR3-201ENST00000272793 HLA-DMBP28068 263 aa12.92□□□□□ -0.34
UBR3-201ENST00000272793 MORN2Q502X0 79 aa12.92□□□□□ -0.34
UBR3-201ENST00000272793 XCL2Q9UBD3 114 aa12.92□□□□□ -0.34
UBR3-201ENST00000272793 C3orf79P0CE67 100 aa12.92□□□□□ -0.34
UBR3-201ENST00000272793 ZNF831Q5JPB2 1677 aa12.92□□□□□ -0.34
UBR3-201ENST00000272793 IGLL5B9A064 214 aa12.92□□□□□ -0.34
UBR3-201ENST00000272793 TMEM14DPA8MWL7 114 aa12.92□□□□□ -0.34
UBR3-201ENST00000272793 ATOX1O00244 68 aa12.92□□□□□ -0.34
UBR3-201ENST00000272793 ZNF106Q9H2Y7 1883 aaKnown RBP12.92□□□□□ -0.34
UBR3-201ENST00000272793 A0A1W2PPM0 123 aa12.92□□□□□ -0.34
UBR3-201ENST00000272793 IGKV1-39P01597 117 aa12.92□□□□□ -0.34
UBR3-201ENST00000272793 IGKV1D-39P04432 117 aa12.92□□□□□ -0.34
UBR3-201ENST00000272793 TMEM242Q9NWH2 141 aa12.92□□□□□ -0.34
UBR3-201ENST00000272793 GREM1O60565 184 aa12.92□□□□□ -0.34
UBR3-201ENST00000272793 ATP1A1-AS1Q5TC04 95 aa12.92□□□□□ -0.34
UBR3-201ENST00000272793 VMO1Q7Z5L0 202 aa12.92□□□□□ -0.34
UBR3-201ENST00000272793 IGFL4Q6B9Z1 124 aa12.91□□□□□ -0.34
UBR3-201ENST00000272793 RNF126Q9BV68 326 aa12.91□□□□□ -0.34
UBR3-201ENST00000272793 TFF1P04155 84 aa12.91□□□□□ -0.34
UBR3-201ENST00000272793 CECR9P0C854 216 aa12.91□□□□□ -0.34
UBR3-201ENST00000272793 APOC4P55056 127 aa12.91□□□□□ -0.34
UBR3-201ENST00000272793 BVES-AS1Q5T3Y7 98 aa12.91□□□□□ -0.34
UBR3-201ENST00000272793 CUL9Q8IWT3 2517 aa12.91□□□□□ -0.34
UBR3-201ENST00000272793 CD200R1LQ6Q8B3 271 aa12.91□□□□□ -0.34
UBR3-201ENST00000272793 UBE2AP49459 152 aa12.91□□□□□ -0.34
UBR3-201ENST00000272793 KLHDC3Q9BQ90 382 aa12.91□□□□□ -0.34
UBR3-201ENST00000272793 SIGLEC1Q9BZZ2 1709 aa12.91□□□□□ -0.34
UBR3-201ENST00000272793 SPINK13Q1W4C9 94 aa12.91□□□□□ -0.34
UBR3-201ENST00000272793 RNF114Q9Y508 228 aa12.91□□□□□ -0.34
UBR3-201ENST00000272793 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.9□□□□□ -0.34
UBR3-201ENST00000272793 MBD3L4A6NDZ8 208 aaPredicted RBP12.9□□□□□ -0.34
UBR3-201ENST00000272793 MBD3L3A6NE82 208 aaPredicted RBP12.9□□□□□ -0.34
UBR3-201ENST00000272793 MBD3L5A6NJ08 208 aaPredicted RBP12.9□□□□□ -0.34
UBR3-201ENST00000272793 MBD3L2Q8NHZ7 208 aaPredicted RBP12.9□□□□□ -0.34
UBR3-201ENST00000272793 IGKV1-8A0A0C4DH67 115 aa12.9□□□□□ -0.34
UBR3-201ENST00000272793 TMEM141Q96I45 108 aa12.9□□□□□ -0.34
UBR3-201ENST00000272793 PSPNO60542 156 aa12.9□□□□□ -0.34
UBR3-201ENST00000272793 ZFP2Q6ZN57 461 aa12.9□□□□□ -0.34
UBR3-201ENST00000272793 PPP1R32Q7Z5V6 425 aa12.9□□□□□ -0.34
UBR3-201ENST00000272793 YPEL1O60688 119 aa12.9□□□□□ -0.34
UBR3-201ENST00000272793 YPEL2Q96QA6 119 aa12.9□□□□□ -0.34
UBR3-201ENST00000272793 CXorf51AA0A1B0GTR3 108 aa12.9□□□□□ -0.34
UBR3-201ENST00000272793 TIRAPP58753 221 aa12.9□□□□□ -0.34
UBR3-201ENST00000272793 IL17RELQ6ZVW7 336 aa12.9□□□□□ -0.34
UBR3-201ENST00000272793 RNF166Q96A37 237 aaPredicted RBP12.9□□□□□ -0.34
UBR3-201ENST00000272793 IGHV4-59P01825 116 aa12.89□□□□□ -0.35
UBR3-201ENST00000272793 C18orf12Q96KH6 178 aa12.89□□□□□ -0.35
UBR3-201ENST00000272793 C17orf100A8MU93 164 aa12.89□□□□□ -0.35
UBR3-201ENST00000272793 CELA3BP08861 270 aa12.89□□□□□ -0.35
UBR3-201ENST00000272793 MRPL14Q6P1L8 145 aaKnown RBP12.89□□□□□ -0.35
UBR3-201ENST00000272793 ZCCHC24Q8N2G6 241 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms