RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 ERVFC1-1P60608 527 aa11.74□□□□□ -0.53
COPS3-201ENST00000268717 C10orf99Q6UWK7 81 aa11.74□□□□□ -0.53
COPS3-201ENST00000268717 UNQ9165/PRO28630Q6UXU0 137 aa11.74□□□□□ -0.53
COPS3-201ENST00000268717 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.74□□□□□ -0.53
COPS3-201ENST00000268717 C12orf54Q6X4T0 127 aa11.74□□□□□ -0.53
COPS3-201ENST00000268717 GOLT1AQ6ZVE7 132 aa11.74□□□□□ -0.53
COPS3-201ENST00000268717 Q86TA4 180 aa11.74□□□□□ -0.53
COPS3-201ENST00000268717 MRPL53Q96EL3 112 aaKnown RBP11.74□□□□□ -0.53
COPS3-201ENST00000268717 FAM210BQ96KR6 192 aa11.74□□□□□ -0.53
COPS3-201ENST00000268717 DAZ1Q9NQZ3 744 aaKnown RBP11.74□□□□□ -0.53
COPS3-201ENST00000268717 ZFP30Q9Y2G7 519 aa11.74□□□□□ -0.53
COPS3-201ENST00000268717 V9GYV3 84 aa11.74□□□□□ -0.53
COPS3-201ENST00000268717 TGIF2-C20orf24A0A0A6YYL0 155 aa11.73□□□□□ -0.53
COPS3-201ENST00000268717 ZNF785A8K8V0 405 aa11.73□□□□□ -0.53
COPS3-201ENST00000268717 C1orf196B1AJZ1 125 aa11.73□□□□□ -0.53
COPS3-201ENST00000268717 IGLV2-11P01706 119 aa11.73□□□□□ -0.53
COPS3-201ENST00000268717 APOHP02749 345 aaPredicted RBP11.73□□□□□ -0.53
COPS3-201ENST00000268717 FLI1Q01543 452 aaPredicted RBP11.73□□□□□ -0.53
COPS3-201ENST00000268717 IBA57Q5T440 356 aaKnown RBP11.73□□□□□ -0.53
COPS3-201ENST00000268717 WFDC12Q8WWY7 111 aa11.73□□□□□ -0.53
COPS3-201ENST00000268717 IL36BQ9NZH7 164 aa11.73□□□□□ -0.53
COPS3-201ENST00000268717 ZNF492Q9P255 531 aa11.73□□□□□ -0.53
COPS3-201ENST00000268717 MLXQ9UH92 298 aa11.73□□□□□ -0.53
COPS3-201ENST00000268717 RPH3ALQ9UNE2 315 aa11.73□□□□□ -0.53
COPS3-201ENST00000268717 FAM181BA6NEQ2 426 aa11.72□□□□□ -0.53
COPS3-201ENST00000268717 TYMSP04818 313 aa11.72□□□□□ -0.53
COPS3-201ENST00000268717 MGST1P10620 155 aaKnown RBP11.72□□□□□ -0.53
COPS3-201ENST00000268717 BMI1P35226 326 aa11.72□□□□□ -0.53
COPS3-201ENST00000268717 RAB5BP61020 215 aa11.72□□□□□ -0.53
COPS3-201ENST00000268717 OR5I1Q13606 314 aa11.72□□□□□ -0.53
COPS3-201ENST00000268717 PSG3Q16557 428 aa11.72□□□□□ -0.53
COPS3-201ENST00000268717 Q6ZSV7 163 aa11.72□□□□□ -0.53
COPS3-201ENST00000268717 TMEM183AQ8IXX5 376 aa11.72□□□□□ -0.53
COPS3-201ENST00000268717 UFC1Q9Y3C8 167 aa11.72□□□□□ -0.53
COPS3-201ENST00000268717 IGHV7-4-1A0A0J9YVY3 117 aa11.71□□□□□ -0.53
COPS3-201ENST00000268717 REC114Q7Z4M0 266 aa11.71□□□□□ -0.53
COPS3-201ENST00000268717 KLHDC1Q8N7A1 406 aa11.71□□□□□ -0.53
COPS3-201ENST00000268717 SRD5A3Q9H8P0 318 aa11.71□□□□□ -0.53
COPS3-201ENST00000268717 A8MWP6 167 aa11.71□□□□□ -0.54
COPS3-201ENST00000268717 M0R3E3 92 aa11.71□□□□□ -0.54
COPS3-201ENST00000268717 LGALS9O00182 355 aa11.71□□□□□ -0.54
COPS3-201ENST00000268717 ZNF207O43670 478 aaKnown RBP11.71□□□□□ -0.54
COPS3-201ENST00000268717 CDX1P47902 265 aaPredicted RBP11.71□□□□□ -0.54
COPS3-201ENST00000268717 RPEL1Q2QD12 228 aa11.71□□□□□ -0.54
COPS3-201ENST00000268717 COX8CQ7Z4L0 72 aa11.71□□□□□ -0.54
COPS3-201ENST00000268717 RBAKDNA6NC62 111 aa11.7□□□□□ -0.54
COPS3-201ENST00000268717 RPS10P46783 165 aaKnown RBP11.7□□□□□ -0.54
COPS3-201ENST00000268717 CT83Q5H943 113 aa11.7□□□□□ -0.54
COPS3-201ENST00000268717 SAMD13Q5VXD3 122 aa11.7□□□□□ -0.54
COPS3-201ENST00000268717 WIPF2Q8TF74 440 aaPredicted RBP11.7□□□□□ -0.54
COPS3-201ENST00000268717 RNASE7Q9H1E1 156 aaKnown RBP11.7□□□□□ -0.54
COPS3-201ENST00000268717 C16orf95Q9H693 158 aa11.7□□□□□ -0.54
COPS3-201ENST00000268717 PSG8Q9UQ74 426 aa11.7□□□□□ -0.54
COPS3-201ENST00000268717 IGHV3-66A0A0C4DH42 116 aa11.69□□□□□ -0.54
COPS3-201ENST00000268717 A0A1W2PPQ1 181 aa11.69□□□□□ -0.54
COPS3-201ENST00000268717 ZNF320A2RRD8 509 aa11.69□□□□□ -0.54
COPS3-201ENST00000268717 FAM3BP58499 235 aaPredicted RBP11.69□□□□□ -0.54
COPS3-201ENST00000268717 C8orf86Q6ZUL3 223 aa11.69□□□□□ -0.54
COPS3-201ENST00000268717 NHLRC2Q8NBF2 726 aa11.69□□□□□ -0.54
COPS3-201ENST00000268717 SMPXQ9UHP9 88 aa11.69□□□□□ -0.54
COPS3-201ENST00000268717 TRAV8-1A0A0A6YYK1 113 aa11.68□□□□□ -0.54
COPS3-201ENST00000268717 C19orf71A6NCJ1 209 aa11.68□□□□□ -0.54
COPS3-201ENST00000268717 CHEK1O14757 476 aa11.68□□□□□ -0.54
COPS3-201ENST00000268717 RPL19P84098 196 aaKnown RBP11.68□□□□□ -0.54
COPS3-201ENST00000268717 LCN12Q6JVE5 192 aa11.68□□□□□ -0.54
COPS3-201ENST00000268717 PRNTQ86SH4 94 aa11.68□□□□□ -0.54
COPS3-201ENST00000268717 C3orf56Q8N813 242 aa11.68□□□□□ -0.54
COPS3-201ENST00000268717 TRRAPQ9Y4A5 3859 aa11.68□□□□□ -0.54
COPS3-201ENST00000268717 IGHV3OR16-13A0A075B7E8 117 aa11.68□□□□□ -0.54
COPS3-201ENST00000268717 IGHV3-49A0A0A0MS15 119 aa11.68□□□□□ -0.54
COPS3-201ENST00000268717 IGHV3-74A0A0B4J1X5 117 aa11.68□□□□□ -0.54
COPS3-201ENST00000268717 HAX1O00165 279 aa11.68□□□□□ -0.54
COPS3-201ENST00000268717 GATCO43716 136 aaKnown RBP11.68□□□□□ -0.54
COPS3-201ENST00000268717 SAPCD1Q5SSQ6 148 aa11.68□□□□□ -0.54
COPS3-201ENST00000268717 NUDT10Q8NFP7 164 aa11.68□□□□□ -0.54
COPS3-201ENST00000268717 C4orf3Q8WVX3 66 aa11.68□□□□□ -0.54
COPS3-201ENST00000268717 NUDT11Q96G61 164 aa11.68□□□□□ -0.54
COPS3-201ENST00000268717 RHPN1-AS1Q9BWJ2 59 aa11.68□□□□□ -0.54
COPS3-201ENST00000268717 FBN3Q75N90 2809 aa11.67□□□□□ -0.54
COPS3-201ENST00000268717 TRAV8-2A0A0B4J237 113 aa11.67□□□□□ -0.54
COPS3-201ENST00000268717 SMIM27A0A1W2PRY6 76 aa11.67□□□□□ -0.54
COPS3-201ENST00000268717 ZNF705GA8MUZ8 300 aaPredicted RBP11.67□□□□□ -0.54
COPS3-201ENST00000268717 NPIPB6E9PJ23 425 aa11.67□□□□□ -0.54
COPS3-201ENST00000268717 TM4SF20Q53R12 229 aa11.67□□□□□ -0.54
COPS3-201ENST00000268717 OR4B1Q8NGF8 309 aa11.67□□□□□ -0.54
COPS3-201ENST00000268717 SGK494Q96LW2 274 aa11.67□□□□□ -0.54
COPS3-201ENST00000268717 NRN1Q9NPD7 142 aa11.67□□□□□ -0.54
COPS3-201ENST00000268717 LOC105371267A0A1B0GV96 52 aa11.66□□□□□ -0.54
COPS3-201ENST00000268717 SOCS3O14543 225 aa11.66□□□□□ -0.54
COPS3-201ENST00000268717 IGHV4OR15-8A0A075B7B6 117 aa11.65□□□□□ -0.54
COPS3-201ENST00000268717 A0A087WW49 117 aa11.65□□□□□ -0.54
COPS3-201ENST00000268717 TMEM213A2RRL7 107 aa11.65□□□□□ -0.54
COPS3-201ENST00000268717 NDUFA7O95182 113 aa11.65□□□□□ -0.54
COPS3-201ENST00000268717 PRR27Q6MZM9 219 aa11.65□□□□□ -0.54
COPS3-201ENST00000268717 GBGT1Q8N5D6 347 aa11.65□□□□□ -0.54
COPS3-201ENST00000268717 TSKUQ8WUA8 353 aa11.65□□□□□ -0.54
COPS3-201ENST00000268717 DAZAP1Q96EP5 407 aaKnown RBP11.65□□□□□ -0.54
COPS3-201ENST00000268717 C16orf92Q96LL3 132 aa11.65□□□□□ -0.54
COPS3-201ENST00000268717 ZNF747Q9BV97 191 aa11.65□□□□□ -0.54
COPS3-201ENST00000268717 RPP21Q9H633 154 aaKnown RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms