RNA–Protein interactions for RNA: ENST00000268603.8

CDH11-201, Transcript of cadherin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH11, Length 6,857 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-201ENST00000268603 TRAV13-2A0A0B4J235 113 aa10.2□□□□□ -0.78
CDH11-201ENST00000268603 MP68P56378 58 aa10.2□□□□□ -0.78
CDH11-201ENST00000268603 IGHV1OR15-1A0A075B7D0 117 aa10.2□□□□□ -0.78
CDH11-201ENST00000268603 POU2AF1Q16633 256 aa10.2□□□□□ -0.78
CDH11-201ENST00000268603 C9orf47Q6ZRZ4 202 aa10.2□□□□□ -0.78
CDH11-201ENST00000268603 C15orf53Q8NAA6 179 aa10.2□□□□□ -0.78
CDH11-201ENST00000268603 CXCL1P09341 107 aa10.2□□□□□ -0.78
CDH11-201ENST00000268603 CD59P13987 128 aa10.2□□□□□ -0.78
CDH11-201ENST00000268603 TMEM141Q96I45 108 aa10.2□□□□□ -0.78
CDH11-201ENST00000268603 CD177Q8N6Q3 437 aa10.2□□□□□ -0.78
CDH11-201ENST00000268603 FGFBP3Q8TAT2 258 aa10.2□□□□□ -0.78
CDH11-201ENST00000268603 SRCAPQ6ZRS2 3230 aa10.2□□□□□ -0.78
CDH11-201ENST00000268603 IGHV1-24A0A0C4DH33 117 aa10.2□□□□□ -0.78
CDH11-201ENST00000268603 RNF222A6NCQ9 220 aa10.2□□□□□ -0.78
CDH11-201ENST00000268603 CD200R1LQ6Q8B3 271 aa10.2□□□□□ -0.78
CDH11-201ENST00000268603 C8orf49Q96NF6 230 aa10.2□□□□□ -0.78
CDH11-201ENST00000268603 FAM231BA6NCW3 169 aa10.19□□□□□ -0.78
CDH11-201ENST00000268603 FUSP35637 526 aaKnown RBP eCLIP10.19□□□□□ -0.78
CDH11-201ENST00000268603 XIRP1Q702N8 1843 aaKnown RBP10.19□□□□□ -0.78
CDH11-201ENST00000268603 IGHV1-69DA0A0B4J2H0 117 aa10.19□□□□□ -0.78
CDH11-201ENST00000268603 A0A1B0GUS0 222 aa10.19□□□□□ -0.78
CDH11-201ENST00000268603 IGHV1-69P01742 117 aa10.19□□□□□ -0.78
CDH11-201ENST00000268603 GAFA1Q96PS6 74 aa10.19□□□□□ -0.78
CDH11-201ENST00000268603 SRSF8Q9BRL6 282 aaKnown RBP10.19□□□□□ -0.78
CDH11-201ENST00000268603 IFI6P09912 130 aa10.19□□□□□ -0.78
CDH11-201ENST00000268603 FAM104BQ5XKR9 115 aa10.19□□□□□ -0.78
CDH11-201ENST00000268603 WFDC1Q9HC57 220 aa10.19□□□□□ -0.78
CDH11-201ENST00000268603 SPTBP11277 2137 aa10.18□□□□□ -0.78
CDH11-201ENST00000268603 KLK5Q9Y337 293 aaPredicted RBP10.18□□□□□ -0.78
CDH11-201ENST00000268603 TAF1LQ8IZX4 1826 aa10.18□□□□□ -0.78
CDH11-201ENST00000268603 CAMK2N2Q96S95 79 aa10.18□□□□□ -0.78
CDH11-201ENST00000268603 CEP290O15078 2479 aa10.18□□□□□ -0.78
CDH11-201ENST00000268603 NRXN2Q9P2S2 1712 aa10.18□□□□□ -0.78
CDH11-201ENST00000268603 TRAV26-2A0A0B4J265 109 aa10.17□□□□□ -0.78
CDH11-201ENST00000268603 CFHR4Q92496 578 aa10.17□□□□□ -0.78
CDH11-201ENST00000268603 SLAQ13239 276 aa10.17□□□□□ -0.78
CDH11-201ENST00000268603 RNF126Q9BV68 326 aa10.17□□□□□ -0.78
CDH11-201ENST00000268603 FBLN5Q9UBX5 448 aa10.17□□□□□ -0.78
CDH11-201ENST00000268603 WDR83OSQ9Y284 106 aa10.17□□□□□ -0.78
CDH11-201ENST00000268603 A0A1B0GX51 115 aa10.17□□□□□ -0.78
CDH11-201ENST00000268603 ANKRD39Q53RE8 183 aa10.17□□□□□ -0.78
CDH11-201ENST00000268603 PRSS57Q6UWY2 283 aa10.17□□□□□ -0.78
CDH11-201ENST00000268603 SRRM5B3KS81 715 aa10.17□□□□□ -0.78
CDH11-201ENST00000268603 PLXNB2O15031 1838 aa10.17□□□□□ -0.78
CDH11-201ENST00000268603 LY75O60449 1722 aa10.17□□□□□ -0.78
CDH11-201ENST00000268603 A0A0A6YYD4 124 aa10.16□□□□□ -0.78
CDH11-201ENST00000268603 PIFOQ8TCI5 191 aa10.16□□□□□ -0.78
CDH11-201ENST00000268603 G3V318 75 aa10.16□□□□□ -0.78
CDH11-201ENST00000268603 CDKN1BP46527 198 aa10.16□□□□□ -0.78
CDH11-201ENST00000268603 PAQR4Q8N4S7 273 aaPredicted RBP10.16□□□□□ -0.78
CDH11-201ENST00000268603 F6UB75 175 aa10.16□□□□□ -0.78
CDH11-201ENST00000268603 PROP1O75360 226 aa10.16□□□□□ -0.78
CDH11-201ENST00000268603 TM2D2Q9BX73 214 aa10.16□□□□□ -0.78
CDH11-201ENST00000268603 FANCMQ8IYD8 2048 aa10.16□□□□□ -0.78
CDH11-201ENST00000268603 BOD1L2Q8IYS8 172 aa10.16□□□□□ -0.78
CDH11-201ENST00000268603 CASC2Q6XLA1 102 aa10.16□□□□□ -0.78
CDH11-201ENST00000268603 NDUFA12Q9UI09 145 aa10.16□□□□□ -0.78
CDH11-201ENST00000268603 INTS1Q8N201 2190 aaKnown RBP10.16□□□□□ -0.78
CDH11-201ENST00000268603 IGLV10-54A0A075B6I4 117 aa10.16□□□□□ -0.78
CDH11-201ENST00000268603 PRR30Q53SZ7 412 aaPredicted RBP10.16□□□□□ -0.78
CDH11-201ENST00000268603 SS18L2Q9UHA2 77 aa10.16□□□□□ -0.78
CDH11-201ENST00000268603 SPTSSBQ8NFR3 76 aa10.15□□□□□ -0.78
CDH11-201ENST00000268603 ORMDL1Q9P0S3 153 aa10.15□□□□□ -0.78
CDH11-201ENST00000268603 E7EQL1 145 aa10.15□□□□□ -0.78
CDH11-201ENST00000268603 TMEM190Q8WZ59 177 aa10.15□□□□□ -0.78
CDH11-201ENST00000268603 SIPA1L1O43166 1804 aa10.15□□□□□ -0.78
CDH11-201ENST00000268603 CACNA1IQ9P0X4 2223 aa10.15□□□□□ -0.78
CDH11-201ENST00000268603 A0A1B0GTI1 187 aa10.15□□□□□ -0.78
CDH11-201ENST00000268603 H0Y9J4 135 aa10.15□□□□□ -0.78
CDH11-201ENST00000268603 ACYP1P07311 99 aa10.15□□□□□ -0.78
CDH11-201ENST00000268603 LRRC37AA6NMS7 1700 aa10.15□□□□□ -0.78
CDH11-201ENST00000268603 C9orf66Q5T8R8 295 aa10.15□□□□□ -0.78
CDH11-201ENST00000268603 LYPD1Q8N2G4 141 aa10.15□□□□□ -0.78
CDH11-201ENST00000268603 AGMATQ9BSE5 352 aa10.15□□□□□ -0.78
CDH11-201ENST00000268603 ARFGEF3Q5TH69 2177 aa10.15□□□□□ -0.79
CDH11-201ENST00000268603 TMEM213A2RRL7 107 aa10.15□□□□□ -0.79
CDH11-201ENST00000268603 IGLL5B9A064 214 aa10.14□□□□□ -0.79
CDH11-201ENST00000268603 SPATA25Q9BR10 227 aa10.14□□□□□ -0.79
CDH11-201ENST00000268603 HERVK_113P63121 156 aa10.14□□□□□ -0.79
CDH11-201ENST00000268603 RHOHQ15669 191 aa10.14□□□□□ -0.79
CDH11-201ENST00000268603 C2orf66Q6UXQ4 117 aa10.14□□□□□ -0.79
CDH11-201ENST00000268603 ABCA4P78363 2273 aa10.14□□□□□ -0.79
CDH11-201ENST00000268603 HS3ST6Q96QI5 342 aa10.14□□□□□ -0.79
CDH11-201ENST00000268603 ESM1Q9NQ30 184 aa10.14□□□□□ -0.79
CDH11-201ENST00000268603 PFN1P07737 140 aaKnown RBP10.14□□□□□ -0.79
CDH11-201ENST00000268603 ICOSQ9Y6W8 199 aa10.14□□□□□ -0.79
CDH11-201ENST00000268603 CABIN1Q9Y6J0 2220 aa10.14□□□□□ -0.79
CDH11-201ENST00000268603 MYOFQ9NZM1 2061 aa10.14□□□□□ -0.79
CDH11-201ENST00000268603 SDHAF1A6NFY7 115 aa10.14□□□□□ -0.79
CDH11-201ENST00000268603 MLANAQ16655 118 aa10.13□□□□□ -0.79
CDH11-201ENST00000268603 GLRX5Q86SX6 157 aa10.13□□□□□ -0.79
CDH11-201ENST00000268603 F8W1H4 67 aa10.13□□□□□ -0.79
CDH11-201ENST00000268603 OR11H6Q8NGC7 330 aa10.13□□□□□ -0.79
CDH11-201ENST00000268603 RNF183Q96D59 192 aa10.13□□□□□ -0.79
CDH11-201ENST00000268603 TEX22C9J3V5 150 aa10.13□□□□□ -0.79
CDH11-201ENST00000268603 SEM1Q6ZVN7 128 aa10.13□□□□□ -0.79
CDH11-201ENST00000268603 MRPL27Q9P0M9 148 aaKnown RBP10.13□□□□□ -0.79
CDH11-201ENST00000268603 REG4Q9BYZ8 158 aa10.13□□□□□ -0.79
CDH11-201ENST00000268603 C9orf118A6NHY6 69 aa10.13□□□□□ -0.79
CDH11-201ENST00000268603 IGKV4-1P06312 121 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 195 ms