RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 CXCL1P09341 107 aa12.45□□□□□ -0.42
TPM1-201ENST00000267996 MGST1P10620 155 aaKnown RBP12.45□□□□□ -0.42
TPM1-201ENST00000267996 HLA-DMBP28068 263 aa12.45□□□□□ -0.42
TPM1-201ENST00000267996 PSG3Q16557 428 aa12.45□□□□□ -0.42
TPM1-201ENST00000267996 C18orf65Q6ZTR6 163 aa12.45□□□□□ -0.42
TPM1-201ENST00000267996 FAM231DQ6ZW35 169 aa12.45□□□□□ -0.42
TPM1-201ENST00000267996 NHLRC2Q8NBF2 726 aa12.45□□□□□ -0.42
TPM1-201ENST00000267996 LINC01006Q8NI28 216 aa12.45□□□□□ -0.42
TPM1-201ENST00000267996 TGIF2-C20orf24A0A0A6YYL0 155 aa12.44□□□□□ -0.42
TPM1-201ENST00000267996 INAFM1C9JVW0 142 aa12.44□□□□□ -0.42
TPM1-201ENST00000267996 HOXD3P31249 432 aaPredicted RBP12.44□□□□□ -0.42
TPM1-201ENST00000267996 ERVFC1-1P60608 527 aa12.44□□□□□ -0.42
TPM1-201ENST00000267996 FLI1Q01543 452 aaPredicted RBP12.44□□□□□ -0.42
TPM1-201ENST00000267996 IGFL4Q6B9Z1 124 aa12.44□□□□□ -0.42
TPM1-201ENST00000267996 LCN12Q6JVE5 192 aa12.44□□□□□ -0.42
TPM1-201ENST00000267996 TMEM183AQ8IXX5 376 aa12.44□□□□□ -0.42
TPM1-201ENST00000267996 MRPL53Q96EL3 112 aaKnown RBP12.44□□□□□ -0.42
TPM1-201ENST00000267996 CLEC5AQ9NY25 188 aa12.44□□□□□ -0.42
TPM1-201ENST00000267996 PSG8Q9UQ74 426 aa12.44□□□□□ -0.42
TPM1-201ENST00000267996 V9GYV3 84 aa12.44□□□□□ -0.42
TPM1-201ENST00000267996 FBLL1A6NHQ2 334 aaKnown RBP12.43□□□□□ -0.42
TPM1-201ENST00000267996 FOXL1Q12952 345 aa12.43□□□□□ -0.42
TPM1-201ENST00000267996 KLF5Q13887 457 aaPredicted RBP12.43□□□□□ -0.42
TPM1-201ENST00000267996 Q71RC1 249 aaPredicted RBP12.43□□□□□ -0.42
TPM1-201ENST00000267996 C1QL4Q86Z23 238 aa12.43□□□□□ -0.42
TPM1-201ENST00000267996 RNASE7Q9H1E1 156 aaKnown RBP12.43□□□□□ -0.42
TPM1-201ENST00000267996 ZFP30Q9Y2G7 519 aa12.43□□□□□ -0.42
TPM1-201ENST00000267996 NSD1Q96L73 2696 aaPredicted RBP12.43□□□□□ -0.42
TPM1-201ENST00000267996 SOCS3O14543 225 aa12.42□□□□□ -0.42
TPM1-201ENST00000267996 S100PP25815 95 aa12.42□□□□□ -0.42
TPM1-201ENST00000267996 PRNTQ86SH4 94 aa12.42□□□□□ -0.42
TPM1-201ENST00000267996 CUBNO60494 3623 aa12.42□□□□□ -0.42
TPM1-201ENST00000267996 EDN2P20800 178 aa12.42□□□□□ -0.42
TPM1-201ENST00000267996 BMI1P35226 326 aa12.42□□□□□ -0.42
TPM1-201ENST00000267996 SYNJ2BPP57105 145 aa12.42□□□□□ -0.42
TPM1-201ENST00000267996 IBA57Q5T440 356 aaKnown RBP12.42□□□□□ -0.42
TPM1-201ENST00000267996 BIN3Q9NQY0 253 aa12.42□□□□□ -0.42
TPM1-201ENST00000267996 IL36BQ9NZH7 164 aa12.42□□□□□ -0.42
TPM1-201ENST00000267996 ZNF492Q9P255 531 aa12.42□□□□□ -0.42
TPM1-201ENST00000267996 FN1P02751 2386 aaKnown RBP12.41□□□□□ -0.42
TPM1-201ENST00000267996 IGKV2-40A0A087WW87 121 aaPredicted RBP12.41□□□□□ -0.42
TPM1-201ENST00000267996 ZNF705FA8MVS1 300 aaPredicted RBP12.41□□□□□ -0.42
TPM1-201ENST00000267996 LINC01619G3V211 115 aa12.41□□□□□ -0.42
TPM1-201ENST00000267996 IGKV2D-40P01614 121 aaPredicted RBP12.41□□□□□ -0.42
TPM1-201ENST00000267996 KCNIP4Q6PIL6 250 aa12.41□□□□□ -0.42
TPM1-201ENST00000267996 RNF182Q8N6D2 247 aa12.41□□□□□ -0.42
TPM1-201ENST00000267996 FAM210BQ96KR6 192 aa12.41□□□□□ -0.42
TPM1-201ENST00000267996 MLXQ9UH92 298 aa12.41□□□□□ -0.42
TPM1-201ENST00000267996 RBAKDNA6NC62 111 aa12.4□□□□□ -0.42
TPM1-201ENST00000267996 DEFB136Q30KP8 78 aa12.4□□□□□ -0.42
TPM1-201ENST00000267996 COX8CQ7Z4L0 72 aa12.4□□□□□ -0.42
TPM1-201ENST00000267996 NUDT10Q8NFP7 164 aa12.4□□□□□ -0.42
TPM1-201ENST00000267996 OR1N2Q8NGR9 330 aa12.4□□□□□ -0.42
TPM1-201ENST00000267996 NUDT11Q96G61 164 aa12.4□□□□□ -0.42
TPM1-201ENST00000267996 C16orf92Q96LL3 132 aa12.4□□□□□ -0.42
TPM1-201ENST00000267996 NRN1Q9NPD7 142 aa12.4□□□□□ -0.42
TPM1-201ENST00000267996 C19orf71A6NCJ1 209 aa12.39□□□□□ -0.43
TPM1-201ENST00000267996 PRAC2D3DTV9 90 aa12.39□□□□□ -0.43
TPM1-201ENST00000267996 LINC00322Q6ZN03 302 aaPredicted RBP12.39□□□□□ -0.43
TPM1-201ENST00000267996 KLHL30-AS1Q8NEE0 82 aa12.39□□□□□ -0.43
TPM1-201ENST00000267996 TRAV9-1A0A075B6T8 112 aa12.38□□□□□ -0.43
TPM1-201ENST00000267996 C2orf70A6NJV1 201 aa12.38□□□□□ -0.43
TPM1-201ENST00000267996 CRLF1O75462 422 aa12.38□□□□□ -0.43
TPM1-201ENST00000267996 PRB4P10163 310 aaPredicted RBP12.38□□□□□ -0.43
TPM1-201ENST00000267996 CD28P10747 220 aa12.38□□□□□ -0.43
TPM1-201ENST00000267996 SLURP1P55000 103 aa12.38□□□□□ -0.43
TPM1-201ENST00000267996 KHDC1LQ5JSQ8 128 aa12.38□□□□□ -0.43
TPM1-201ENST00000267996 TCF24Q7RTU0 167 aa12.38□□□□□ -0.43
TPM1-201ENST00000267996 OR11H1Q8NG94 326 aa12.38□□□□□ -0.43
TPM1-201ENST00000267996 DPF1Q92782 380 aa12.38□□□□□ -0.43
TPM1-201ENST00000267996 VGLL1Q99990 258 aa12.38□□□□□ -0.43
TPM1-201ENST00000267996 TCF21O43680 179 aa12.38□□□□□ -0.43
TPM1-201ENST00000267996 GATCO43716 136 aaKnown RBP12.38□□□□□ -0.43
TPM1-201ENST00000267996 TYMSP04818 313 aa12.38□□□□□ -0.43
TPM1-201ENST00000267996 CBLN1P23435 193 aa12.38□□□□□ -0.43
TPM1-201ENST00000267996 FAM3BP58499 235 aaPredicted RBP12.38□□□□□ -0.43
TPM1-201ENST00000267996 PRR27Q6MZM9 219 aa12.38□□□□□ -0.43
TPM1-201ENST00000267996 BTF3L4Q96K17 158 aa12.38□□□□□ -0.43
TPM1-201ENST00000267996 C20orf173Q96LM9 149 aa12.38□□□□□ -0.43
TPM1-201ENST00000267996 A0A1W2PPQ1 181 aa12.37□□□□□ -0.43
TPM1-201ENST00000267996 ZNF705GA8MUZ8 300 aaPredicted RBP12.37□□□□□ -0.43
TPM1-201ENST00000267996 PROK1P58294 105 aa12.37□□□□□ -0.43
TPM1-201ENST00000267996 SAPCD1Q5SSQ6 148 aa12.37□□□□□ -0.43
TPM1-201ENST00000267996 SAMD13Q5VXD3 122 aa12.37□□□□□ -0.43
TPM1-201ENST00000267996 ZC2HC1AQ96GY0 325 aa12.37□□□□□ -0.43
TPM1-201ENST00000267996 PRR25Q96S07 402 aa12.37□□□□□ -0.43
TPM1-201ENST00000267996 SMIM27A0A1W2PRY6 76 aa12.36□□□□□ -0.43
TPM1-201ENST00000267996 NPIPB6E9PJ23 425 aa12.36□□□□□ -0.43
TPM1-201ENST00000267996 RPS10P46783 165 aaKnown RBP12.36□□□□□ -0.43
TPM1-201ENST00000267996 FHL3Q13643 280 aa12.36□□□□□ -0.43
TPM1-201ENST00000267996 ADAMTSL5Q6ZMM2 481 aa12.36□□□□□ -0.43
TPM1-201ENST00000267996 GBGT1Q8N5D6 347 aa12.36□□□□□ -0.43
TPM1-201ENST00000267996 SRD5A3Q9H8P0 318 aa12.36□□□□□ -0.43
TPM1-201ENST00000267996 RNF114Q9Y508 228 aa12.36□□□□□ -0.43
TPM1-201ENST00000267996 TSSC4Q9Y5U2 329 aaPredicted RBP12.36□□□□□ -0.43
TPM1-201ENST00000267996 C1orf196B1AJZ1 125 aa12.35□□□□□ -0.43
TPM1-201ENST00000267996 RPL11P62913 178 aaKnown RBP12.35□□□□□ -0.43
TPM1-201ENST00000267996 CT83Q5H943 113 aa12.35□□□□□ -0.43
TPM1-201ENST00000267996 DCANP1Q8TF63 244 aa12.35□□□□□ -0.43
TPM1-201ENST00000267996 ASCL2Q99929 193 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms