RNA–Protein interactions for RNA: ENST00000266088.8

SLC5A1-201, Transcript of solute carrier family 5 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC5A1, Length 5,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC5A1-201ENST00000266088 IGKV3D-20A0A0C4DH25 116 aa6.84□□□□□ -1.31
SLC5A1-201ENST00000266088 IGHV2-70P01814 119 aa6.84□□□□□ -1.31
SLC5A1-201ENST00000266088 DEFB131AP59861 70 aa6.84□□□□□ -1.31
SLC5A1-201ENST00000266088 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.84□□□□□ -1.31
SLC5A1-201ENST00000266088 ZNF462Q96JM2 2506 aa6.84□□□□□ -1.31
SLC5A1-201ENST00000266088 ADMP35318 185 aa6.84□□□□□ -1.32
SLC5A1-201ENST00000266088 FAM120AOSQ5T036 256 aa6.84□□□□□ -1.32
SLC5A1-201ENST00000266088 IGHV4-30-2A0A087WSY4 118 aa6.83□□□□□ -1.32
SLC5A1-201ENST00000266088 TRGV1A0A0A0MS02 117 aa6.83□□□□□ -1.32
SLC5A1-201ENST00000266088 TDGF1P3P51864 188 aa6.83□□□□□ -1.32
SLC5A1-201ENST00000266088 MRAP2Q96G30 205 aa6.83□□□□□ -1.32
SLC5A1-201ENST00000266088 RCHY1Q96PM5 261 aa6.83□□□□□ -1.32
SLC5A1-201ENST00000266088 SHANK2-AS3Q9BTD1 123 aa6.83□□□□□ -1.32
SLC5A1-201ENST00000266088 ANKRD11Q6UB99 2663 aaPredicted RBP6.83□□□□□ -1.32
SLC5A1-201ENST00000266088 HOXA3O43365 443 aaPredicted RBP6.83□□□□□ -1.32
SLC5A1-201ENST00000266088 IGHV3-53P01767 116 aa6.83□□□□□ -1.32
SLC5A1-201ENST00000266088 C2orf88Q9BSF0 95 aa6.83□□□□□ -1.32
SLC5A1-201ENST00000266088 NRN1Q9NPD7 142 aa6.83□□□□□ -1.32
SLC5A1-201ENST00000266088 F2Z2F3 143 aa6.83□□□□□ -1.32
SLC5A1-201ENST00000266088 J3QLI3 93 aa6.83□□□□□ -1.32
SLC5A1-201ENST00000266088 NCR2O95944 276 aa6.83□□□□□ -1.32
SLC5A1-201ENST00000266088 PAX9P55771 341 aa6.83□□□□□ -1.32
SLC5A1-201ENST00000266088 ERASQ7Z444 233 aa6.83□□□□□ -1.32
SLC5A1-201ENST00000266088 FASNP49327 2511 aaKnown RBP6.83□□□□□ -1.32
SLC5A1-201ENST00000266088 CMC4P56277 68 aaPredicted RBP6.83□□□□□ -1.32
SLC5A1-201ENST00000266088 ERCC8Q13216 396 aa6.83□□□□□ -1.32
SLC5A1-201ENST00000266088 TMEM249Q2WGJ8 235 aa6.83□□□□□ -1.32
SLC5A1-201ENST00000266088 RNF182Q8N6D2 247 aa6.83□□□□□ -1.32
SLC5A1-201ENST00000266088 ST6GALNAC6Q969X2 333 aa6.83□□□□□ -1.32
SLC5A1-201ENST00000266088 C14orf144Q96I85 54 aa6.83□□□□□ -1.32
SLC5A1-201ENST00000266088 DOPEY1Q5JWR5 2465 aa6.82□□□□□ -1.32
SLC5A1-201ENST00000266088 IGHV4-39P01824 125 aa6.82□□□□□ -1.32
SLC5A1-201ENST00000266088 LYZL1Q6UWQ5 148 aa6.82□□□□□ -1.32
SLC5A1-201ENST00000266088 OR13C6PQ8NH95 151 aa6.82□□□□□ -1.32
SLC5A1-201ENST00000266088 LINC00477Q96M19 166 aa6.82□□□□□ -1.32
SLC5A1-201ENST00000266088 CHCHD5Q9BSY4 110 aa6.82□□□□□ -1.32
SLC5A1-201ENST00000266088 NDUFA3O95167 84 aa6.82□□□□□ -1.32
SLC5A1-201ENST00000266088 IGHV4-59P01825 116 aa6.82□□□□□ -1.32
SLC5A1-201ENST00000266088 RNASE1P07998 156 aaKnown RBP6.82□□□□□ -1.32
SLC5A1-201ENST00000266088 CXCL1P09341 107 aa6.82□□□□□ -1.32
SLC5A1-201ENST00000266088 CACNG7P62955 275 aa6.82□□□□□ -1.32
SLC5A1-201ENST00000266088 DEFB112Q30KQ8 113 aa6.82□□□□□ -1.32
SLC5A1-201ENST00000266088 VCX2Q9H322 139 aa6.82□□□□□ -1.32
SLC5A1-201ENST00000266088 TNRC6BQ9UPQ9 1833 aaKnown RBP6.82□□□□□ -1.32
SLC5A1-201ENST00000266088 EML5Q05BV3 1969 aa6.82□□□□□ -1.32
SLC5A1-201ENST00000266088 PSG3Q16557 428 aa6.82□□□□□ -1.32
SLC5A1-201ENST00000266088 CRIP3Q6Q6R5 217 aa6.82□□□□□ -1.32
SLC5A1-201ENST00000266088 TNCP24821 2201 aa6.82□□□□□ -1.32
SLC5A1-201ENST00000266088 FNDC10F2Z333 226 aa6.82□□□□□ -1.32
SLC5A1-201ENST00000266088 IFI27P40305 119 aaPredicted RBP6.82□□□□□ -1.32
SLC5A1-201ENST00000266088 ZNF415Q09FC8 603 aa6.82□□□□□ -1.32
SLC5A1-201ENST00000266088 DEFB113Q30KQ7 82 aa6.82□□□□□ -1.32
SLC5A1-201ENST00000266088 PYY3Q5JQD4 70 aa6.82□□□□□ -1.32
SLC5A1-201ENST00000266088 DYSFO75923 2080 aa6.82□□□□□ -1.32
SLC5A1-201ENST00000266088 SH2D1AO60880 128 aa6.81□□□□□ -1.32
SLC5A1-201ENST00000266088 PPBPP02775 128 aa6.81□□□□□ -1.32
SLC5A1-201ENST00000266088 TMEM170AQ8WVE7 144 aa6.81□□□□□ -1.32
SLC5A1-201ENST00000266088 MEGF9Q9H1U4 602 aa6.81□□□□□ -1.32
SLC5A1-201ENST00000266088 A0A1B0GWB2 263 aa6.81□□□□□ -1.32
SLC5A1-201ENST00000266088 LINC00614P0C842 121 aa6.81□□□□□ -1.32
SLC5A1-201ENST00000266088 MST1LQ2TV78 715 aa6.81□□□□□ -1.32
SLC5A1-201ENST00000266088 LYPD1Q8N2G4 141 aa6.81□□□□□ -1.32
SLC5A1-201ENST00000266088 LYPD6BQ8NI32 183 aa6.81□□□□□ -1.32
SLC5A1-201ENST00000266088 UBE2CO00762 179 aa6.81□□□□□ -1.32
SLC5A1-201ENST00000266088 YPEL3P61236 119 aaPredicted RBP6.81□□□□□ -1.32
SLC5A1-201ENST00000266088 C10orf126Q8N4M7 172 aa6.81□□□□□ -1.32
SLC5A1-201ENST00000266088 JMJD1CQ15652 2540 aa6.81□□□□□ -1.32
SLC5A1-201ENST00000266088 LINC01619G3V211 115 aa6.81□□□□□ -1.32
SLC5A1-201ENST00000266088 HIST1H2BKO60814 126 aa6.81□□□□□ -1.32
SLC5A1-201ENST00000266088 LHBP01229 141 aa6.81□□□□□ -1.32
SLC5A1-201ENST00000266088 HIST1H2BJP06899 126 aa6.81□□□□□ -1.32
SLC5A1-201ENST00000266088 HOXA5P20719 270 aa6.81□□□□□ -1.32
SLC5A1-201ENST00000266088 HIST1H2BOP23527 126 aa6.81□□□□□ -1.32
SLC5A1-201ENST00000266088 HIST1H2BBP33778 126 aa6.81□□□□□ -1.32
SLC5A1-201ENST00000266088 HIST1H2BDP58876 126 aa6.81□□□□□ -1.32
SLC5A1-201ENST00000266088 HIST1H2BCP62807 126 aa6.81□□□□□ -1.32
SLC5A1-201ENST00000266088 HIST2H2BEQ16778 126 aa6.81□□□□□ -1.32
SLC5A1-201ENST00000266088 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.81□□□□□ -1.32
SLC5A1-201ENST00000266088 HIST1H2BHQ93079 126 aa6.81□□□□□ -1.32
SLC5A1-201ENST00000266088 HIST1H2BNQ99877 126 aa6.81□□□□□ -1.32
SLC5A1-201ENST00000266088 HIST1H2BMQ99879 126 aa6.81□□□□□ -1.32
SLC5A1-201ENST00000266088 XCL2Q9UBD3 114 aa6.81□□□□□ -1.32
SLC5A1-201ENST00000266088 CYSLTR1Q9Y271 337 aa6.81□□□□□ -1.32
SLC5A1-201ENST00000266088 SRSF1Q07955 248 aaKnown RBP eCLIP6.8□□□□□ -1.32
SLC5A1-201ENST00000266088 NXT2Q9NPJ8 142 aaKnown RBP6.8□□□□□ -1.32
SLC5A1-201ENST00000266088 DEFB130BP0DP73 79 aa6.8□□□□□ -1.32
SLC5A1-201ENST00000266088 DEFB130AP0DP74 79 aa6.8□□□□□ -1.32
SLC5A1-201ENST00000266088 HOXB4P17483 251 aaPredicted RBP6.8□□□□□ -1.32
SLC5A1-201ENST00000266088 TCTEX1D4Q5JR98 221 aa6.8□□□□□ -1.32
SLC5A1-201ENST00000266088 C14orf178Q8N769 122 aaPredicted RBP6.8□□□□□ -1.32
SLC5A1-201ENST00000266088 GNB1LQ9BYB4 327 aa6.8□□□□□ -1.32
SLC5A1-201ENST00000266088 TSPAN13O95857 204 aa6.8□□□□□ -1.32
SLC5A1-201ENST00000266088 CDPF1Q6NVV7 123 aa6.8□□□□□ -1.32
SLC5A1-201ENST00000266088 NCOA6Q14686 2063 aaPredicted RBP6.8□□□□□ -1.32
SLC5A1-201ENST00000266088 H3BRM9 83 aa6.8□□□□□ -1.32
SLC5A1-201ENST00000266088 INSP01308 110 aa6.8□□□□□ -1.32
SLC5A1-201ENST00000266088 HBDP02042 147 aa6.8□□□□□ -1.32
SLC5A1-201ENST00000266088 ZNF876PQ49A33 203 aa6.8□□□□□ -1.32
SLC5A1-201ENST00000266088 A0A087WX48 190 aa6.79□□□□□ -1.32
SLC5A1-201ENST00000266088 D6R8Y8 96 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms