RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 DSCAML1Q8TD84 2053 aa6.98□□□□□ -1.29
VAPB-201ENST00000265619 PGPA6NDG6 321 aa6.98□□□□□ -1.29
VAPB-201ENST00000265619 C15orf61A6NNL5 157 aa6.98□□□□□ -1.29
VAPB-201ENST00000265619 MYCNOSP40205 109 aa6.98□□□□□ -1.29
VAPB-201ENST00000265619 MRPL36Q9P0J6 103 aaKnown RBP6.98□□□□□ -1.29
VAPB-201ENST00000265619 EPDR1Q9UM22 224 aa6.98□□□□□ -1.29
VAPB-201ENST00000265619 COL27A1Q8IZC6 1860 aaPredicted RBP6.98□□□□□ -1.29
VAPB-201ENST00000265619 TMEM30CPA0ZSE6 113 aa6.98□□□□□ -1.29
VAPB-201ENST00000265619 D6R8Y8 96 aa6.98□□□□□ -1.29
VAPB-201ENST00000265619 F8WDY8 70 aa6.98□□□□□ -1.29
VAPB-201ENST00000265619 NDUFS7O75251 213 aa6.98□□□□□ -1.29
VAPB-201ENST00000265619 GAS8-AS1O95177 125 aa6.98□□□□□ -1.29
VAPB-201ENST00000265619 PAX8Q06710 450 aa6.98□□□□□ -1.29
VAPB-201ENST00000265619 PRR30Q53SZ7 412 aaPredicted RBP6.98□□□□□ -1.29
VAPB-201ENST00000265619 ZNF502Q8TBZ5 544 aa6.98□□□□□ -1.29
VAPB-201ENST00000265619 FLYWCH2Q96CP2 140 aaKnown RBP6.98□□□□□ -1.29
VAPB-201ENST00000265619 EPG5Q9HCE0 2579 aa6.98□□□□□ -1.29
VAPB-201ENST00000265619 PKD1L2Q7Z442 2459 aa6.98□□□□□ -1.29
VAPB-201ENST00000265619 TMSB15BA0A087X1C1 80 aa6.98□□□□□ -1.29
VAPB-201ENST00000265619 RAXQ9Y2V3 346 aa6.98□□□□□ -1.29
VAPB-201ENST00000265619 OOEPA6NGQ2 149 aa6.97□□□□□ -1.29
VAPB-201ENST00000265619 WDR31Q8NA23 367 aa6.97□□□□□ -1.29
VAPB-201ENST00000265619 TRGV8A0A0C4DH27 118 aa6.97□□□□□ -1.29
VAPB-201ENST00000265619 TMEM213A2RRL7 107 aa6.97□□□□□ -1.29
VAPB-201ENST00000265619 MORN3Q6PF18 240 aaPredicted RBP6.97□□□□□ -1.29
VAPB-201ENST00000265619 C9orf106Q8NAJ2 232 aa6.97□□□□□ -1.29
VAPB-201ENST00000265619 IFI27L1Q96BM0 104 aa6.97□□□□□ -1.29
VAPB-201ENST00000265619 DUX5Q96PT3 197 aa6.97□□□□□ -1.29
VAPB-201ENST00000265619 TMEM160Q9NX00 188 aa6.97□□□□□ -1.29
VAPB-201ENST00000265619 E7EUB6 86 aa6.97□□□□□ -1.29
VAPB-201ENST00000265619 CFAP126Q5VTH2 177 aa6.97□□□□□ -1.29
VAPB-201ENST00000265619 ZFP2Q6ZN57 461 aa6.97□□□□□ -1.29
VAPB-201ENST00000265619 MDP1Q86V88 176 aa6.97□□□□□ -1.29
VAPB-201ENST00000265619 PPDPFQ9H3Y8 114 aa6.97□□□□□ -1.29
VAPB-201ENST00000265619 TMEM14BQ9NUH8 114 aa6.97□□□□□ -1.29
VAPB-201ENST00000265619 ZNRD1Q9P1U0 126 aa6.97□□□□□ -1.29
VAPB-201ENST00000265619 CENPEQ02224 2701 aa6.97□□□□□ -1.29
VAPB-201ENST00000265619 MYO18BQ8IUG5 2567 aa6.96□□□□□ -1.29
VAPB-201ENST00000265619 C15orf65H3BRN8 121 aa6.96□□□□□ -1.29
VAPB-201ENST00000265619 CRLF1O75462 422 aa6.96□□□□□ -1.29
VAPB-201ENST00000265619 AMN1Q8IY45 258 aa6.96□□□□□ -1.29
VAPB-201ENST00000265619 OR10X1Q8NGY0 326 aa6.96□□□□□ -1.29
VAPB-201ENST00000265619 ANKHD1Q8IWZ3 2542 aaKnown RBP6.96□□□□□ -1.3
VAPB-201ENST00000265619 FCER1GP30273 86 aa6.96□□□□□ -1.3
VAPB-201ENST00000265619 ERVK-16P61578 105 aa6.96□□□□□ -1.3
VAPB-201ENST00000265619 HSPE1P61604 102 aaKnown RBP6.96□□□□□ -1.3
VAPB-201ENST00000265619 RRN3P1Q2M238 152 aa6.96□□□□□ -1.3
VAPB-201ENST00000265619 SRSF12Q8WXF0 261 aaKnown RBP6.95□□□□□ -1.3
VAPB-201ENST00000265619 GNG12Q9UBI6 72 aa6.95□□□□□ -1.3
VAPB-201ENST00000265619 A0A087WX48 190 aa6.95□□□□□ -1.3
VAPB-201ENST00000265619 COL8A1P27658 744 aa6.95□□□□□ -1.3
VAPB-201ENST00000265619 OR5AN1Q8NGI8 311 aa6.95□□□□□ -1.3
VAPB-201ENST00000265619 ENY2Q9NPA8 101 aa6.95□□□□□ -1.3
VAPB-201ENST00000265619 KLF12Q9Y4X4 402 aa6.95□□□□□ -1.3
VAPB-201ENST00000265619 FAM90A1Q86YD7 464 aa6.95□□□□□ -1.3
VAPB-201ENST00000265619 IFI27L2Q9H2X8 130 aa6.95□□□□□ -1.3
VAPB-201ENST00000265619 WNK2Q9Y3S1 2297 aa6.95□□□□□ -1.3
VAPB-201ENST00000265619 hADV38S2A0JD32 116 aa6.94□□□□□ -1.3
VAPB-201ENST00000265619 COX7A2P2O60397 106 aa6.94□□□□□ -1.3
VAPB-201ENST00000265619 S1PR3Q99500 378 aa6.94□□□□□ -1.3
VAPB-201ENST00000265619 HIGD1BQ9P298 99 aa6.94□□□□□ -1.3
VAPB-201ENST00000265619 LRBAP50851 2863 aa6.94□□□□□ -1.3
VAPB-201ENST00000265619 A0A1B0GUT8 65 aa6.94□□□□□ -1.3
VAPB-201ENST00000265619 ENSAO43768 121 aaKnown RBP6.94□□□□□ -1.3
VAPB-201ENST00000265619 C10orf113Q5VZT2 155 aa6.94□□□□□ -1.3
VAPB-201ENST00000265619 LINC00305Q7Z4B0 112 aa6.94□□□□□ -1.3
VAPB-201ENST00000265619 C11orf53Q8IXP5 236 aa6.94□□□□□ -1.3
VAPB-201ENST00000265619 IGKV1D-37A0A075B6S9 117 aa6.94□□□□□ -1.3
VAPB-201ENST00000265619 TRAV4A0A0B4J268 109 aa6.94□□□□□ -1.3
VAPB-201ENST00000265619 NPYP01303 97 aa6.94□□□□□ -1.3
VAPB-201ENST00000265619 IGKV1-16P04430 117 aa6.94□□□□□ -1.3
VAPB-201ENST00000265619 PRNTQ86SH4 94 aa6.94□□□□□ -1.3
VAPB-201ENST00000265619 FOXA2Q9Y261 457 aaPredicted RBP6.94□□□□□ -1.3
VAPB-201ENST00000265619 HIVEP3Q5T1R4 2406 aa6.93□□□□□ -1.3
VAPB-201ENST00000265619 IGLV2-11P01706 119 aa6.93□□□□□ -1.3
VAPB-201ENST00000265619 HBDP02042 147 aa6.93□□□□□ -1.3
VAPB-201ENST00000265619 RNASE2P10153 161 aaKnown RBP6.93□□□□□ -1.3
VAPB-201ENST00000265619 ORM2P19652 201 aa6.93□□□□□ -1.3
VAPB-201ENST00000265619 ZC2HC1BQ5TFG8 222 aa6.93□□□□□ -1.3
VAPB-201ENST00000265619 GFRALQ6UXV0 394 aa6.93□□□□□ -1.3
VAPB-201ENST00000265619 Q6ZQT7 251 aa6.93□□□□□ -1.3
VAPB-201ENST00000265619 CTSZQ9UBR2 303 aa6.93□□□□□ -1.3
VAPB-201ENST00000265619 SOX21Q9Y651 276 aaPredicted RBP6.93□□□□□ -1.3
VAPB-201ENST00000265619 M0R1B8 84 aa6.93□□□□□ -1.3
VAPB-201ENST00000265619 DNPH1O43598 174 aa6.93□□□□□ -1.3
VAPB-201ENST00000265619 IGHV1-2P23083 117 aa6.93□□□□□ -1.3
VAPB-201ENST00000265619 CRIP1P50238 77 aa6.93□□□□□ -1.3
VAPB-201ENST00000265619 CT83Q5H943 113 aa6.93□□□□□ -1.3
VAPB-201ENST00000265619 ZFAND6Q6FIF0 208 aa6.93□□□□□ -1.3
VAPB-201ENST00000265619 PDPNQ86YL7 162 aa6.93□□□□□ -1.3
VAPB-201ENST00000265619 EXOC3-AS1Q8N2X6 119 aa6.93□□□□□ -1.3
VAPB-201ENST00000265619 RITA1Q96K30 269 aa6.93□□□□□ -1.3
VAPB-201ENST00000265619 ZNF492Q9P255 531 aa6.93□□□□□ -1.3
VAPB-201ENST00000265619 FABP5P3A8MUU1 101 aa6.93□□□□□ -1.3
VAPB-201ENST00000265619 TCRAP04437 139 aa6.93□□□□□ -1.3
VAPB-201ENST00000265619 PSMB2P49721 201 aa6.93□□□□□ -1.3
VAPB-201ENST00000265619 NPIPB3Q92617 1050 aa6.93□□□□□ -1.3
VAPB-201ENST00000265619 GFRA4Q9GZZ7 299 aa6.93□□□□□ -1.3
VAPB-201ENST00000265619 PROCRQ9UNN8 238 aa6.93□□□□□ -1.3
VAPB-201ENST00000265619 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms