RNA–Protein interactions for RNA: ENST00000263966.7

USP13-201, Transcript of ubiquitin specific peptidase 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP13, Length 8,323 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP13-201ENST00000263966 SPANXDQ9BXN6 97 aa13.48□□□□□ -0.25
USP13-201ENST00000263966 NDUFB8O95169 186 aa13.48□□□□□ -0.25
USP13-201ENST00000263966 C1orf43Q9BWL3 253 aa13.48□□□□□ -0.25
USP13-201ENST00000263966 ADMP35318 185 aa13.48□□□□□ -0.25
USP13-201ENST00000263966 RPRMLQ8N4K4 120 aa13.48□□□□□ -0.25
USP13-201ENST00000263966 SH2D1AO60880 128 aa13.47□□□□□ -0.25
USP13-201ENST00000263966 IGFBP3P17936 291 aaPredicted RBP13.47□□□□□ -0.25
USP13-201ENST00000263966 SERF1AO75920 110 aa13.47□□□□□ -0.25
USP13-201ENST00000263966 PFN2P35080 140 aa13.47□□□□□ -0.25
USP13-201ENST00000263966 ID3Q02535 119 aa13.47□□□□□ -0.25
USP13-201ENST00000263966 IGHV1-69DA0A0B4J2H0 117 aa13.47□□□□□ -0.25
USP13-201ENST00000263966 IGHV1-69P01742 117 aa13.47□□□□□ -0.25
USP13-201ENST00000263966 WFDC6Q9BQY6 131 aa13.47□□□□□ -0.25
USP13-201ENST00000263966 IGLV3-32A0A0A0MS00 114 aa13.47□□□□□ -0.25
USP13-201ENST00000263966 NDUFB1O75438 58 aa13.47□□□□□ -0.25
USP13-201ENST00000263966 RPL18AQ02543 176 aaKnown RBP13.47□□□□□ -0.25
USP13-201ENST00000263966 TMEM141Q96I45 108 aa13.47□□□□□ -0.25
USP13-201ENST00000263966 GAGE12JA6NER3 117 aa13.47□□□□□ -0.25
USP13-201ENST00000263966 ZNF250P15622 560 aa13.47□□□□□ -0.25
USP13-201ENST00000263966 GAGE1Q13065 139 aa13.47□□□□□ -0.25
USP13-201ENST00000263966 GAGE4Q13068 117 aa13.47□□□□□ -0.25
USP13-201ENST00000263966 GAGE5Q13069 117 aa13.47□□□□□ -0.25
USP13-201ENST00000263966 H0YJW9 148 aa13.46□□□□□ -0.25
USP13-201ENST00000263966 TM2D2Q9BX73 214 aa13.46□□□□□ -0.25
USP13-201ENST00000263966 TRAV13-2A0A0B4J235 113 aa13.46□□□□□ -0.25
USP13-201ENST00000263966 IFITM3Q01628 133 aa13.46□□□□□ -0.25
USP13-201ENST00000263966 ATG2AQ2TAZ0 1938 aa13.46□□□□□ -0.25
USP13-201ENST00000263966 TMEM258P61165 79 aa13.46□□□□□ -0.25
USP13-201ENST00000263966 LINC00518Q8N0U6 118 aa13.46□□□□□ -0.25
USP13-201ENST00000263966 GAGE12BA1L429 117 aa13.46□□□□□ -0.26
USP13-201ENST00000263966 GAGE7O76087 117 aa13.46□□□□□ -0.26
USP13-201ENST00000263966 GAGE12FP0CL80 117 aa13.46□□□□□ -0.26
USP13-201ENST00000263966 GAGE12GP0CL81 117 aa13.46□□□□□ -0.26
USP13-201ENST00000263966 GAGE12IP0CL82 117 aa13.46□□□□□ -0.26
USP13-201ENST00000263966 MPV17L2Q567V2 206 aa13.46□□□□□ -0.26
USP13-201ENST00000263966 TANC1Q9C0D5 1861 aa13.46□□□□□ -0.26
USP13-201ENST00000263966 CD55P08174 381 aa13.45□□□□□ -0.26
USP13-201ENST00000263966 PCDH15Q96QU1 1955 aa13.45□□□□□ -0.26
USP13-201ENST00000263966 FUSP35637 526 aaKnown RBP eCLIP13.45□□□□□ -0.26
USP13-201ENST00000263966 CDKN1BP46527 198 aa13.45□□□□□ -0.26
USP13-201ENST00000263966 OVOL3O00110 214 aa13.45□□□□□ -0.26
USP13-201ENST00000263966 IGHG4P01861 327 aa13.45□□□□□ -0.26
USP13-201ENST00000263966 TIRAPP58753 221 aa13.45□□□□□ -0.26
USP13-201ENST00000263966 SPINK13Q1W4C9 94 aa13.45□□□□□ -0.26
USP13-201ENST00000263966 TRAV5A0A0B4J249 113 aa13.45□□□□□ -0.26
USP13-201ENST00000263966 NTN3O00634 580 aaPredicted RBP13.45□□□□□ -0.26
USP13-201ENST00000263966 NCR2O95944 276 aa13.45□□□□□ -0.26
USP13-201ENST00000263966 LYZL1Q6UWQ5 148 aa13.45□□□□□ -0.26
USP13-201ENST00000263966 DOPEY1Q5JWR5 2465 aa13.44□□□□□ -0.26
USP13-201ENST00000263966 IGKV1OR2-108A0A075B7D4 117 aa13.44□□□□□ -0.26
USP13-201ENST00000263966 BUB3O43684 328 aa13.44□□□□□ -0.26
USP13-201ENST00000263966 SRP19P09132 144 aaKnown RBP13.44□□□□□ -0.26
USP13-201ENST00000263966 PRTN3P24158 256 aa13.44□□□□□ -0.26
USP13-201ENST00000263966 IGHV1-24A0A0C4DH33 117 aa13.44□□□□□ -0.26
USP13-201ENST00000263966 ZNF106Q9H2Y7 1883 aaKnown RBP13.44□□□□□ -0.26
USP13-201ENST00000263966 DKK1O94907 266 aa13.44□□□□□ -0.26
USP13-201ENST00000263966 Q9HAA7 133 aa13.44□□□□□ -0.26
USP13-201ENST00000263966 NUP210LQ5VU65 1888 aa13.44□□□□□ -0.26
USP13-201ENST00000263966 A0A1B0GTI1 187 aa13.43□□□□□ -0.26
USP13-201ENST00000263966 CRYGSP22914 178 aa13.43□□□□□ -0.26
USP13-201ENST00000263966 RTBDNQ9BSG5 229 aaPredicted RBP13.43□□□□□ -0.26
USP13-201ENST00000263966 Q6ZWC4 215 aa13.43□□□□□ -0.26
USP13-201ENST00000263966 STPG4Q8N801 248 aa13.43□□□□□ -0.26
USP13-201ENST00000263966 GAGE6Q13070 117 aa13.43□□□□□ -0.26
USP13-201ENST00000263966 LHFPL4Q7Z7J7 247 aa13.43□□□□□ -0.26
USP13-201ENST00000263966 GAS1P54826 345 aa13.43□□□□□ -0.26
USP13-201ENST00000263966 C15orf53Q8NAA6 179 aa13.42□□□□□ -0.26
USP13-201ENST00000263966 ZNF837Q96EG3 531 aaPredicted RBP13.42□□□□□ -0.26
USP13-201ENST00000263966 REG4Q9BYZ8 158 aa13.42□□□□□ -0.26
USP13-201ENST00000263966 MAPK1IP1LQ8NDC0 245 aa13.42□□□□□ -0.26
USP13-201ENST00000263966 TMEM170AQ8WVE7 144 aa13.42□□□□□ -0.26
USP13-201ENST00000263966 GSN-AS1Q9NRJ2 163 aa13.42□□□□□ -0.26
USP13-201ENST00000263966 ETDCA0A1B0GVM5 59 aa13.41□□□□□ -0.26
USP13-201ENST00000263966 H3BQ85 93 aa13.41□□□□□ -0.26
USP13-201ENST00000263966 DEPPQ9NTK1 212 aa13.41□□□□□ -0.26
USP13-201ENST00000263966 IGHV2-70DA0A0C4DH43 119 aa13.41□□□□□ -0.26
USP13-201ENST00000263966 C4orf51C9J302 202 aa13.41□□□□□ -0.26
USP13-201ENST00000263966 RHOHQ15669 191 aa13.41□□□□□ -0.26
USP13-201ENST00000263966 IGHV3-16A0A0C4DH30 117 aa13.41□□□□□ -0.26
USP13-201ENST00000263966 CCL24O00175 119 aa13.41□□□□□ -0.26
USP13-201ENST00000263966 PAX9P55771 341 aa13.41□□□□□ -0.26
USP13-201ENST00000263966 C1orf122Q6ZSJ8 110 aa13.41□□□□□ -0.26
USP13-201ENST00000263966 HAMPP81172 84 aa13.4□□□□□ -0.26
USP13-201ENST00000263966 RUSC1-AS1Q66K80 236 aa13.4□□□□□ -0.26
USP13-201ENST00000263966 ZNF319Q9P2F9 582 aa13.4□□□□□ -0.26
USP13-201ENST00000263966 PCP4P48539 62 aa13.4□□□□□ -0.26
USP13-201ENST00000263966 NHLRC3Q5JS37 347 aa13.4□□□□□ -0.26
USP13-201ENST00000263966 IGKV1-5P01602 117 aa13.4□□□□□ -0.26
USP13-201ENST00000263966 RBM38Q9H0Z9 239 aaKnown RBP13.4□□□□□ -0.26
USP13-201ENST00000263966 HERVK_113P63121 156 aa13.4□□□□□ -0.26
USP13-201ENST00000263966 C1orf194Q5T5A4 169 aa13.4□□□□□ -0.26
USP13-201ENST00000263966 Q6ZS92 163 aa13.4□□□□□ -0.26
USP13-201ENST00000263966 PIN1P1O15428 100 aa13.39□□□□□ -0.27
USP13-201ENST00000263966 BCL6BQ8N143 479 aaPredicted RBP13.39□□□□□ -0.27
USP13-201ENST00000263966 NAV3Q8IVL0 2385 aa13.39□□□□□ -0.27
USP13-201ENST00000263966 TNRC6BQ9UPQ9 1833 aaKnown RBP13.39□□□□□ -0.27
USP13-201ENST00000263966 TMEM75Q8N9X5 138 aa13.39□□□□□ -0.27
USP13-201ENST00000263966 DEFB105AQ8NG35 78 aa13.39□□□□□ -0.27
USP13-201ENST00000263966 Q8TAT8 98 aa13.39□□□□□ -0.27
USP13-201ENST00000263966 FNDC10F2Z333 226 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms