RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 IQCF2Q8IXL9 164 aa12.26□□□□□ -0.45
CHCHD3-201ENST00000262570 RPUSD4Q96CM3 377 aaKnown RBP12.26□□□□□ -0.45
CHCHD3-201ENST00000262570 Q9H3A6 140 aa12.26□□□□□ -0.45
CHCHD3-201ENST00000262570 PRELID1Q9Y255 219 aa12.26□□□□□ -0.45
CHCHD3-201ENST00000262570 HLA-DRB4X5D2U9 266 aa12.26□□□□□ -0.45
CHCHD3-201ENST00000262570 A0A0J9YX75 114 aa12.26□□□□□ -0.45
CHCHD3-201ENST00000262570 H3BMM0 161 aa12.26□□□□□ -0.45
CHCHD3-201ENST00000262570 EBLN2Q6P2I7 272 aa12.26□□□□□ -0.45
CHCHD3-201ENST00000262570 STHQ8IWL8 128 aa12.26□□□□□ -0.45
CHCHD3-201ENST00000262570 MRPL53Q96EL3 112 aaKnown RBP12.26□□□□□ -0.45
CHCHD3-201ENST00000262570 LOC102724200A0A096LPH7 203 aaPredicted RBP12.25□□□□□ -0.45
CHCHD3-201ENST00000262570 TRPT1Q86TN4 253 aaKnown RBP12.25□□□□□ -0.45
CHCHD3-201ENST00000262570 AGRNO00468 2067 aa12.25□□□□□ -0.45
CHCHD3-201ENST00000262570 TRAV1-1A0A0B4J248 108 aa12.24□□□□□ -0.45
CHCHD3-201ENST00000262570 PRAC2D3DTV9 90 aa12.24□□□□□ -0.45
CHCHD3-201ENST00000262570 PRB4P10163 310 aaPredicted RBP12.24□□□□□ -0.45
CHCHD3-201ENST00000262570 TEX261Q6UWH6 196 aa12.24□□□□□ -0.45
CHCHD3-201ENST00000262570 OR8A1Q8NGG7 326 aa12.24□□□□□ -0.45
CHCHD3-201ENST00000262570 OTORQ9NRC9 128 aa12.24□□□□□ -0.45
CHCHD3-201ENST00000262570 PGPA6NDG6 321 aa12.23□□□□□ -0.45
CHCHD3-201ENST00000262570 ZNF705EA8MWA4 302 aaPredicted RBP12.23□□□□□ -0.45
CHCHD3-201ENST00000262570 RPL35AP18077 110 aaKnown RBP12.23□□□□□ -0.45
CHCHD3-201ENST00000262570 A0A1B0GV50 99 aa12.22□□□□□ -0.45
CHCHD3-201ENST00000262570 A0A1W2PRE2 83 aa12.22□□□□□ -0.45
CHCHD3-201ENST00000262570 ZNF705DP0CH99 300 aaPredicted RBP12.22□□□□□ -0.45
CHCHD3-201ENST00000262570 ZNF705BP0CI00 300 aaPredicted RBP12.22□□□□□ -0.45
CHCHD3-201ENST00000262570 CLUHP3Q96NS8 147 aa12.22□□□□□ -0.45
CHCHD3-201ENST00000262570 KIR2DL5BA0A0G2JN68 375 aa12.22□□□□□ -0.45
CHCHD3-201ENST00000262570 KIR2DL5BA0A0G2JPC4 375 aa12.22□□□□□ -0.45
CHCHD3-201ENST00000262570 A8MTW9 85 aa12.22□□□□□ -0.45
CHCHD3-201ENST00000262570 DUSP14O95147 198 aaKnown RBP12.22□□□□□ -0.45
CHCHD3-201ENST00000262570 CNN1P51911 297 aaKnown RBP12.22□□□□□ -0.45
CHCHD3-201ENST00000262570 HAGHQ16775 308 aa12.22□□□□□ -0.45
CHCHD3-201ENST00000262570 KIR2DL5AQ8N109 375 aa12.22□□□□□ -0.45
CHCHD3-201ENST00000262570 OR4B1Q8NGF8 309 aa12.22□□□□□ -0.45
CHCHD3-201ENST00000262570 KIR2DL5BQ8NHK3 375 aa12.22□□□□□ -0.45
CHCHD3-201ENST00000262570 RXFP4Q8TDU9 374 aa12.22□□□□□ -0.45
CHCHD3-201ENST00000262570 DNAH9Q9NYC9 4486 aa12.21□□□□□ -0.45
CHCHD3-201ENST00000262570 GGTLC3B5MD39 225 aa12.21□□□□□ -0.46
CHCHD3-201ENST00000262570 HBE1P02100 147 aa12.21□□□□□ -0.46
CHCHD3-201ENST00000262570 CSN1S1P47710 185 aa12.21□□□□□ -0.46
CHCHD3-201ENST00000262570 UBE2G2P60604 165 aa12.21□□□□□ -0.46
CHCHD3-201ENST00000262570 SUMO1P63165 101 aaKnown RBP12.21□□□□□ -0.46
CHCHD3-201ENST00000262570 BLOC1S1P78537 153 aa12.21□□□□□ -0.46
CHCHD3-201ENST00000262570 CCL20P78556 96 aa12.21□□□□□ -0.46
CHCHD3-201ENST00000262570 HIST1H1AQ02539 215 aaPredicted RBP12.21□□□□□ -0.46
CHCHD3-201ENST00000262570 SBSPONQ8IVN8 264 aa12.21□□□□□ -0.46
CHCHD3-201ENST00000262570 ARL6IP6Q8N6S5 226 aa12.21□□□□□ -0.46
CHCHD3-201ENST00000262570 ZNF680Q8NEM1 530 aa12.21□□□□□ -0.46
CHCHD3-201ENST00000262570 B9D2Q9BPU9 175 aa12.21□□□□□ -0.46
CHCHD3-201ENST00000262570 CSTL1Q9H114 145 aa12.21□□□□□ -0.46
CHCHD3-201ENST00000262570 YTHDF2Q9Y5A9 579 aaKnown RBP12.21□□□□□ -0.46
CHCHD3-201ENST00000262570 FAM74A7A6NL05 159 aa12.2□□□□□ -0.46
CHCHD3-201ENST00000262570 TEX46H3BTG2 121 aa12.2□□□□□ -0.46
CHCHD3-201ENST00000262570 IGKV3-20P01619 116 aa12.2□□□□□ -0.46
CHCHD3-201ENST00000262570 APOC4P55056 127 aa12.2□□□□□ -0.46
CHCHD3-201ENST00000262570 OR10J6PQ8NGY7 276 aa12.2□□□□□ -0.46
CHCHD3-201ENST00000262570 CMTM2Q8TAZ6 248 aa12.2□□□□□ -0.46
CHCHD3-201ENST00000262570 NKX6-2Q9C056 277 aaPredicted RBP12.2□□□□□ -0.46
CHCHD3-201ENST00000262570 ARL2-SNX15V9GYD0 113 aa12.2□□□□□ -0.46
CHCHD3-201ENST00000262570 DIRC3C9JPN6 131 aa12.19□□□□□ -0.46
CHCHD3-201ENST00000262570 MORN3Q6PF18 240 aaPredicted RBP12.19□□□□□ -0.46
CHCHD3-201ENST00000262570 AMTNQ6UX39 209 aa12.19□□□□□ -0.46
CHCHD3-201ENST00000262570 IFNA7P01567 189 aa12.18□□□□□ -0.46
CHCHD3-201ENST00000262570 SLC25A5P05141 298 aaKnown RBP12.18□□□□□ -0.46
CHCHD3-201ENST00000262570 GIG44P09565 113 aaPredicted RBP12.18□□□□□ -0.46
CHCHD3-201ENST00000262570 PPT1P50897 306 aa12.18□□□□□ -0.46
CHCHD3-201ENST00000262570 NUTF2P61970 127 aaKnown RBP12.18□□□□□ -0.46
CHCHD3-201ENST00000262570 C5orf17Q8NAS9 161 aa12.18□□□□□ -0.46
CHCHD3-201ENST00000262570 LYPD6BQ8NI32 183 aa12.18□□□□□ -0.46
CHCHD3-201ENST00000262570 ASCL2Q99929 193 aa12.18□□□□□ -0.46
CHCHD3-201ENST00000262570 NBEAL2Q6ZNJ1 2754 aa12.18□□□□□ -0.46
CHCHD3-201ENST00000262570 IGKV2-40A0A087WW87 121 aaPredicted RBP12.18□□□□□ -0.46
CHCHD3-201ENST00000262570 NPIPB6E9PJ23 425 aa12.18□□□□□ -0.46
CHCHD3-201ENST00000262570 UBE2CO00762 179 aa12.18□□□□□ -0.46
CHCHD3-201ENST00000262570 PAGE4O60829 102 aa12.18□□□□□ -0.46
CHCHD3-201ENST00000262570 IGKV2D-40P01614 121 aaPredicted RBP12.18□□□□□ -0.46
CHCHD3-201ENST00000262570 PMS2P11Q13670 270 aa12.18□□□□□ -0.46
CHCHD3-201ENST00000262570 C9orf47Q6ZRZ4 202 aa12.18□□□□□ -0.46
CHCHD3-201ENST00000262570 CCDC28AQ8IWP9 274 aa12.18□□□□□ -0.46
CHCHD3-201ENST00000262570 RBAKDNA6NC62 111 aa12.17□□□□□ -0.46
CHCHD3-201ENST00000262570 GNG5P63218 68 aa12.17□□□□□ -0.46
CHCHD3-201ENST00000262570 ERCC8Q13216 396 aa12.17□□□□□ -0.46
CHCHD3-201ENST00000262570 LINC00477Q96M19 166 aa12.17□□□□□ -0.46
CHCHD3-201ENST00000262570 VGLL1Q99990 258 aa12.17□□□□□ -0.46
CHCHD3-201ENST00000262570 AGPAT4-IT1Q9H0P7 198 aa12.17□□□□□ -0.46
CHCHD3-201ENST00000262570 SLC35B3Q9H1N7 401 aa12.17□□□□□ -0.46
CHCHD3-201ENST00000262570 EPDR1Q9UM22 224 aa12.17□□□□□ -0.46
CHCHD3-201ENST00000262570 CA1P00915 261 aaPredicted RBP12.16□□□□□ -0.46
CHCHD3-201ENST00000262570 TCRAP04437 139 aa12.16□□□□□ -0.46
CHCHD3-201ENST00000262570 CST9LP1Q5W188 147 aa12.16□□□□□ -0.46
CHCHD3-201ENST00000262570 Q6ZWC4 215 aa12.16□□□□□ -0.46
CHCHD3-201ENST00000262570 MANBALQ9NQG1 85 aa12.16□□□□□ -0.46
CHCHD3-201ENST00000262570 GNG13Q9P2W3 67 aa12.16□□□□□ -0.46
CHCHD3-201ENST00000262570 RPH3ALQ9UNE2 315 aa12.16□□□□□ -0.46
CHCHD3-201ENST00000262570 CT45A10P0DMU9 189 aa12.15□□□□□ -0.46
CHCHD3-201ENST00000262570 GOLT1AQ6ZVE7 132 aa12.15□□□□□ -0.46
CHCHD3-201ENST00000262570 TM2D3Q9BRN9 247 aa12.15□□□□□ -0.46
CHCHD3-201ENST00000262570 SERTM2A0A1B0GWG4 89 aa12.14□□□□□ -0.47
CHCHD3-201ENST00000262570 ATP5G3P48201 142 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms