RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 C9orf139Q6ZV77 190 aa9.79□□□□□ -0.84
SPG11-201ENST00000261866 DLX4Q92988 240 aaPredicted RBP9.79□□□□□ -0.84
SPG11-201ENST00000261866 SPRNQ5BIV9 151 aa9.79□□□□□ -0.84
SPG11-201ENST00000261866 TEX43Q6ZNM6 134 aa9.79□□□□□ -0.84
SPG11-201ENST00000261866 Q9HAA7 133 aa9.79□□□□□ -0.84
SPG11-201ENST00000261866 CXCL1P09341 107 aa9.78□□□□□ -0.84
SPG11-201ENST00000261866 CMC4P56277 68 aaPredicted RBP9.78□□□□□ -0.84
SPG11-201ENST00000261866 TCTEX1D4Q5JR98 221 aa9.78□□□□□ -0.84
SPG11-201ENST00000261866 MTURNQ8N3F0 131 aa9.78□□□□□ -0.84
SPG11-201ENST00000261866 RPP25LQ8N5L8 163 aaKnown RBP9.78□□□□□ -0.84
SPG11-201ENST00000261866 ZNF561-AS1K7EIQ3 104 aa9.78□□□□□ -0.84
SPG11-201ENST00000261866 PLXNA3P51805 1871 aa9.78□□□□□ -0.84
SPG11-201ENST00000261866 ATXN8Q156A1 80 aa9.78□□□□□ -0.84
SPG11-201ENST00000261866 RNASE13Q5GAN3 156 aaKnown RBP9.78□□□□□ -0.84
SPG11-201ENST00000261866 IGHV4-59P01825 116 aa9.78□□□□□ -0.84
SPG11-201ENST00000261866 NMSQ5H8A3 153 aa9.78□□□□□ -0.84
SPG11-201ENST00000261866 AMN1Q8IY45 258 aa9.78□□□□□ -0.84
SPG11-201ENST00000261866 IFI27L1Q96BM0 104 aa9.78□□□□□ -0.84
SPG11-201ENST00000261866 TRAV26-2A0A0B4J265 109 aa9.78□□□□□ -0.84
SPG11-201ENST00000261866 NUP35Q8NFH5 326 aa9.78□□□□□ -0.84
SPG11-201ENST00000261866 A0A087X0K7 114 aa9.77□□□□□ -0.85
SPG11-201ENST00000261866 TEX36Q5VZQ5 186 aa9.77□□□□□ -0.85
SPG11-201ENST00000261866 LHFPL1Q86WI0 220 aa9.77□□□□□ -0.85
SPG11-201ENST00000261866 IGKV1-6A0A0C4DH72 117 aa9.77□□□□□ -0.85
SPG11-201ENST00000261866 QRFPP83859 136 aa9.77□□□□□ -0.85
SPG11-201ENST00000261866 SAMD5Q5TGI4 173 aa9.77□□□□□ -0.85
SPG11-201ENST00000261866 SNHG12Q9BXW3 62 aa9.77□□□□□ -0.85
SPG11-201ENST00000261866 PLXNA4Q9HCM2 1894 aa9.77□□□□□ -0.85
SPG11-201ENST00000261866 DEFB112Q30KQ8 113 aa9.77□□□□□ -0.85
SPG11-201ENST00000261866 ATP6V0BQ99437 205 aa9.77□□□□□ -0.85
SPG11-201ENST00000261866 A0A0J9YY99 117 aa9.77□□□□□ -0.85
SPG11-201ENST00000261866 NEGR1Q7Z3B1 354 aa9.77□□□□□ -0.85
SPG11-201ENST00000261866 HELZP42694 1942 aaKnown RBP9.77□□□□□ -0.85
SPG11-201ENST00000261866 AZU1P20160 251 aa9.77□□□□□ -0.85
SPG11-201ENST00000261866 TMEM170AQ8WVE7 144 aa9.77□□□□□ -0.85
SPG11-201ENST00000261866 C17orf58Q2M2W7 97 aa9.76□□□□□ -0.85
SPG11-201ENST00000261866 RNF5Q99942 180 aa9.76□□□□□ -0.85
SPG11-201ENST00000261866 C1QTNF4Q9BXJ3 329 aa9.76□□□□□ -0.85
SPG11-201ENST00000261866 PTPRDP23468 1912 aa9.76□□□□□ -0.85
SPG11-201ENST00000261866 SS18Q15532 418 aa9.76□□□□□ -0.85
SPG11-201ENST00000261866 LOXP28300 417 aaPredicted RBP9.76□□□□□ -0.85
SPG11-201ENST00000261866 GAGE6Q13070 117 aa9.76□□□□□ -0.85
SPG11-201ENST00000261866 MORN3Q6PF18 240 aaPredicted RBP9.76□□□□□ -0.85
SPG11-201ENST00000261866 DTX1Q86Y01 620 aa9.76□□□□□ -0.85
SPG11-201ENST00000261866 IGLV3-9A0A075B6K5 115 aa9.76□□□□□ -0.85
SPG11-201ENST00000261866 A8MWV9 139 aa9.76□□□□□ -0.85
SPG11-201ENST00000261866 ARMS2P0C7Q2 107 aa9.76□□□□□ -0.85
SPG11-201ENST00000261866 IGFL3Q6UXB1 125 aa9.76□□□□□ -0.85
SPG11-201ENST00000261866 CHD3Q12873 2000 aaKnown RBP9.76□□□□□ -0.85
SPG11-201ENST00000261866 A0A087WWC5 75 aa9.75□□□□□ -0.85
SPG11-201ENST00000261866 TMEM213A2RRL7 107 aa9.75□□□□□ -0.85
SPG11-201ENST00000261866 FHL1Q13642 323 aa9.75□□□□□ -0.85
SPG11-201ENST00000261866 hADV29S1A0JD25 119 aa9.75□□□□□ -0.85
SPG11-201ENST00000261866 TMEM158Q8WZ71 300 aa9.75□□□□□ -0.85
SPG11-201ENST00000261866 CYTL1Q9NRR1 136 aa9.75□□□□□ -0.85
SPG11-201ENST00000261866 C2orf82Q6UX34 121 aa9.75□□□□□ -0.85
SPG11-201ENST00000261866 LGALS1P09382 135 aaKnown RBP9.75□□□□□ -0.85
SPG11-201ENST00000261866 MST1LQ2TV78 715 aa9.75□□□□□ -0.85
SPG11-201ENST00000261866 NKAPP1Q8N9T2 125 aa9.75□□□□□ -0.85
SPG11-201ENST00000261866 PRIMA1Q86XR5 153 aa9.75□□□□□ -0.85
SPG11-201ENST00000261866 PIP4P1Q86T03 277 aa9.75□□□□□ -0.85
SPG11-201ENST00000261866 C5orf30Q96GV9 206 aa9.75□□□□□ -0.85
SPG11-201ENST00000261866 PLCE1Q9P212 2302 aa9.75□□□□□ -0.85
SPG11-201ENST00000261866 LINC00518Q8N0U6 118 aa9.74□□□□□ -0.85
SPG11-201ENST00000261866 LEPROTO15243 131 aa9.74□□□□□ -0.85
SPG11-201ENST00000261866 SPRY2O43597 315 aa9.74□□□□□ -0.85
SPG11-201ENST00000261866 GNB1LQ9BYB4 327 aa9.74□□□□□ -0.85
SPG11-201ENST00000261866 TMEM14EPQ6UXP3 125 aa9.74□□□□□ -0.85
SPG11-201ENST00000261866 RLFQ13129 1914 aa9.74□□□□□ -0.85
SPG11-201ENST00000261866 ACACAQ13085 2346 aa9.74□□□□□ -0.85
SPG11-201ENST00000261866 SIP14410 1827 aa9.74□□□□□ -0.85
SPG11-201ENST00000261866 ZNF479Q96JC4 524 aa9.74□□□□□ -0.85
SPG11-201ENST00000261866 IGF2BP2-AS1Q96M15 143 aa9.74□□□□□ -0.85
SPG11-201ENST00000261866 LAMTOR2Q9Y2Q5 125 aa9.73□□□□□ -0.85
SPG11-201ENST00000261866 IGHV4-30-2A0A087WSY4 118 aa9.73□□□□□ -0.85
SPG11-201ENST00000261866 GATA3P23771 443 aa9.73□□□□□ -0.85
SPG11-201ENST00000261866 IGHV4-38-2P0DP08 117 aa9.73□□□□□ -0.85
SPG11-201ENST00000261866 IGKV1OR2-108A0A075B7D4 117 aa9.73□□□□□ -0.85
SPG11-201ENST00000261866 SHANK2-AS3Q9BTD1 123 aa9.73□□□□□ -0.85
SPG11-201ENST00000261866 HIST1H2BKO60814 126 aa9.73□□□□□ -0.85
SPG11-201ENST00000261866 HIST1H2BJP06899 126 aa9.73□□□□□ -0.85
SPG11-201ENST00000261866 HOXB4P17483 251 aaPredicted RBP9.73□□□□□ -0.85
SPG11-201ENST00000261866 HIST1H2BOP23527 126 aa9.73□□□□□ -0.85
SPG11-201ENST00000261866 HIST1H2BBP33778 126 aa9.73□□□□□ -0.85
SPG11-201ENST00000261866 ZNF134P52741 427 aa9.73□□□□□ -0.85
SPG11-201ENST00000261866 HIST1H2BDP58876 126 aa9.73□□□□□ -0.85
SPG11-201ENST00000261866 HIST1H2BCP62807 126 aa9.73□□□□□ -0.85
SPG11-201ENST00000261866 RBMY1FQ15415 496 aaKnown RBP9.73□□□□□ -0.85
SPG11-201ENST00000261866 HIST2H2BEQ16778 126 aa9.73□□□□□ -0.85
SPG11-201ENST00000261866 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.73□□□□□ -0.85
SPG11-201ENST00000261866 HIST1H2BHQ93079 126 aa9.73□□□□□ -0.85
SPG11-201ENST00000261866 HIST1H2BNQ99877 126 aa9.73□□□□□ -0.85
SPG11-201ENST00000261866 HIST1H2BMQ99879 126 aa9.73□□□□□ -0.85
SPG11-201ENST00000261866 PPBPP02775 128 aa9.73□□□□□ -0.85
SPG11-201ENST00000261866 PMVKQ15126 192 aa9.73□□□□□ -0.85
SPG11-201ENST00000261866 GTSF1LQ9H1H1 148 aa9.72□□□□□ -0.85
SPG11-201ENST00000261866 DKK4Q9UBT3 224 aa9.72□□□□□ -0.85
SPG11-201ENST00000261866 PLXND1Q9Y4D7 1925 aa9.72□□□□□ -0.85
SPG11-201ENST00000261866 USF3Q68DE3 2245 aa9.72□□□□□ -0.85
SPG11-201ENST00000261866 F6UB75 175 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms