RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 F6UZH7 168 aa8.66□□□□□ -1.02
PFDN1-201ENST00000261813 MRPS12O15235 138 aaKnown RBP8.66□□□□□ -1.02
PFDN1-201ENST00000261813 PDE6DO43924 150 aa8.66□□□□□ -1.02
PFDN1-201ENST00000261813 PAGE4O60829 102 aa8.66□□□□□ -1.02
PFDN1-201ENST00000261813 PYYP10082 97 aa8.66□□□□□ -1.02
PFDN1-201ENST00000261813 PAFAH1B2P68402 229 aa8.66□□□□□ -1.02
PFDN1-201ENST00000261813 MEF2BQ02080 365 aaPredicted RBP8.66□□□□□ -1.02
PFDN1-201ENST00000261813 GUCA2BQ16661 112 aa8.66□□□□□ -1.02
PFDN1-201ENST00000261813 HAGHQ16775 308 aa8.66□□□□□ -1.02
PFDN1-201ENST00000261813 CST9LP1Q5W188 147 aa8.66□□□□□ -1.02
PFDN1-201ENST00000261813 FAM90A2PQ658T7 463 aa8.66□□□□□ -1.02
PFDN1-201ENST00000261813 RBPMS2Q6ZRY4 209 aaKnown RBP8.66□□□□□ -1.02
PFDN1-201ENST00000261813 GLMPQ8WWB7 406 aa8.66□□□□□ -1.02
PFDN1-201ENST00000261813 SLC50A1Q9BRV3 221 aa8.66□□□□□ -1.02
PFDN1-201ENST00000261813 TMPRSS5Q9H3S3 457 aa8.66□□□□□ -1.02
PFDN1-201ENST00000261813 AAMDCQ9H7C9 122 aa8.66□□□□□ -1.02
PFDN1-201ENST00000261813 TRBV19A0A075B6N1 114 aa8.65□□□□□ -1.02
PFDN1-201ENST00000261813 FAM74A7A6NL05 159 aa8.65□□□□□ -1.02
PFDN1-201ENST00000261813 TSPAN4O14817 238 aa8.65□□□□□ -1.02
PFDN1-201ENST00000261813 EIF3GO75821 320 aaKnown RBP eCLIP8.65□□□□□ -1.02
PFDN1-201ENST00000261813 TOR2AQ5JU69 321 aa8.65□□□□□ -1.02
PFDN1-201ENST00000261813 TCF24Q7RTU0 167 aa8.65□□□□□ -1.02
PFDN1-201ENST00000261813 Q8N1Y9 231 aa8.65□□□□□ -1.02
PFDN1-201ENST00000261813 MRAPQ8TCY5 172 aa8.65□□□□□ -1.02
PFDN1-201ENST00000261813 RXFP4Q8TDU9 374 aa8.65□□□□□ -1.02
PFDN1-201ENST00000261813 BLNKQ8WV28 456 aa8.65□□□□□ -1.02
PFDN1-201ENST00000261813 RPUSD4Q96CM3 377 aaKnown RBP8.65□□□□□ -1.02
PFDN1-201ENST00000261813 TREM1Q9NP99 234 aa8.65□□□□□ -1.02
PFDN1-201ENST00000261813 OTORQ9NRC9 128 aa8.65□□□□□ -1.02
PFDN1-201ENST00000261813 ZNF586Q9NXT0 402 aa8.65□□□□□ -1.02
PFDN1-201ENST00000261813 C11orf94C9JXX5 98 aa8.64□□□□□ -1.03
PFDN1-201ENST00000261813 TMEM250H0YL14 139 aa8.64□□□□□ -1.03
PFDN1-201ENST00000261813 CD7P09564 240 aa8.64□□□□□ -1.03
PFDN1-201ENST00000261813 RANP62826 216 aaKnown RBP8.64□□□□□ -1.03
PFDN1-201ENST00000261813 RPL11P62913 178 aaKnown RBP8.64□□□□□ -1.03
PFDN1-201ENST00000261813 LCE3BQ5TA77 95 aa8.64□□□□□ -1.03
PFDN1-201ENST00000261813 SPAG8Q99932 426 aaPredicted RBP8.64□□□□□ -1.03
PFDN1-201ENST00000261813 IGKV3-7A0A075B6H7 116 aa8.63□□□□□ -1.03
PFDN1-201ENST00000261813 H3BQ15 152 aa8.63□□□□□ -1.03
PFDN1-201ENST00000261813 ID1P41134 155 aa8.63□□□□□ -1.03
PFDN1-201ENST00000261813 CSN1S1P47710 185 aa8.63□□□□□ -1.03
PFDN1-201ENST00000261813 UBE2G2P60604 165 aa8.63□□□□□ -1.03
PFDN1-201ENST00000261813 ICAM4Q14773 271 aa8.63□□□□□ -1.03
PFDN1-201ENST00000261813 LINC00469Q8N7U9 141 aa8.63□□□□□ -1.03
PFDN1-201ENST00000261813 CMTM2Q8TAZ6 248 aa8.63□□□□□ -1.03
PFDN1-201ENST00000261813 HIST1H2BAQ96A08 127 aa8.63□□□□□ -1.03
PFDN1-201ENST00000261813 RARRES2Q99969 163 aa8.63□□□□□ -1.03
PFDN1-201ENST00000261813 SLC35B3Q9H1N7 401 aa8.63□□□□□ -1.03
PFDN1-201ENST00000261813 NRN1Q9NPD7 142 aa8.63□□□□□ -1.03
PFDN1-201ENST00000261813 C19orf73Q9NVV2 129 aa8.63□□□□□ -1.03
PFDN1-201ENST00000261813 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.63□□□□□ -1.03
PFDN1-201ENST00000261813 DNAH9Q9NYC9 4486 aa8.63□□□□□ -1.03
PFDN1-201ENST00000261813 TRAV2A0A0B4J234 112 aa8.62□□□□□ -1.03
PFDN1-201ENST00000261813 SERTM2A0A1B0GWG4 89 aa8.62□□□□□ -1.03
PFDN1-201ENST00000261813 PGPA6NDG6 321 aa8.62□□□□□ -1.03
PFDN1-201ENST00000261813 KRBOX1C9JBD0 128 aa8.62□□□□□ -1.03
PFDN1-201ENST00000261813 K7EQM0 130 aa8.62□□□□□ -1.03
PFDN1-201ENST00000261813 S100A9P06702 114 aaKnown RBP8.62□□□□□ -1.03
PFDN1-201ENST00000261813 CD81P60033 236 aa8.62□□□□□ -1.03
PFDN1-201ENST00000261813 SUMO1P63165 101 aaKnown RBP8.62□□□□□ -1.03
PFDN1-201ENST00000261813 FAM74A3Q4VXF1 159 aa8.62□□□□□ -1.03
PFDN1-201ENST00000261813 GTSCR1Q86UQ5 136 aa8.62□□□□□ -1.03
PFDN1-201ENST00000261813 KRTAP19-1Q8IUB9 90 aa8.62□□□□□ -1.03
PFDN1-201ENST00000261813 C5orf17Q8NAS9 161 aa8.62□□□□□ -1.03
PFDN1-201ENST00000261813 Q9H3A6 140 aa8.62□□□□□ -1.03
PFDN1-201ENST00000261813 ZNF331Q9NQX6 463 aaPredicted RBP8.62□□□□□ -1.03
PFDN1-201ENST00000261813 YTHDF2Q9Y5A9 579 aaKnown RBP8.62□□□□□ -1.03
PFDN1-201ENST00000261813 SMAD5-AS1Q9Y6J3 95 aa8.62□□□□□ -1.03
PFDN1-201ENST00000261813 NBEAL2Q6ZNJ1 2754 aa8.62□□□□□ -1.03
PFDN1-201ENST00000261813 FBLL1A6NHQ2 334 aaKnown RBP8.61□□□□□ -1.03
PFDN1-201ENST00000261813 DNASE2O00115 360 aaPredicted RBP8.61□□□□□ -1.03
PFDN1-201ENST00000261813 ISLRO14498 428 aa8.61□□□□□ -1.03
PFDN1-201ENST00000261813 TFPI2P48307 235 aa8.61□□□□□ -1.03
PFDN1-201ENST00000261813 CMC4P56277 68 aaPredicted RBP8.61□□□□□ -1.03
PFDN1-201ENST00000261813 DEFB121Q5J5C9 76 aa8.61□□□□□ -1.03
PFDN1-201ENST00000261813 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.61□□□□□ -1.03
PFDN1-201ENST00000261813 CCDC28AQ8IWP9 274 aa8.61□□□□□ -1.03
PFDN1-201ENST00000261813 GBGT1Q8N5D6 347 aa8.61□□□□□ -1.03
PFDN1-201ENST00000261813 MRPL53Q96EL3 112 aaKnown RBP8.61□□□□□ -1.03
PFDN1-201ENST00000261813 C16orf92Q96LL3 132 aa8.61□□□□□ -1.03
PFDN1-201ENST00000261813 WFDC10AQ9H1F0 79 aa8.61□□□□□ -1.03
PFDN1-201ENST00000261813 MS4A6AQ9H2W1 248 aa8.61□□□□□ -1.03
PFDN1-201ENST00000261813 TMEM218A2RU14 115 aa8.61□□□□□ -1.03
PFDN1-201ENST00000261813 OR4C46A6NHA9 309 aa8.61□□□□□ -1.03
PFDN1-201ENST00000261813 NDUFB4O95168 129 aa8.61□□□□□ -1.03
PFDN1-201ENST00000261813 SLC25A5P05141 298 aaKnown RBP8.61□□□□□ -1.03
PFDN1-201ENST00000261813 SRP19P09132 144 aaKnown RBP8.61□□□□□ -1.03
PFDN1-201ENST00000261813 SNRPD3P62318 126 aaKnown RBP8.61□□□□□ -1.03
PFDN1-201ENST00000261813 SOHLH1Q5JUK2 328 aa8.61□□□□□ -1.03
PFDN1-201ENST00000261813 C11orf52Q96A22 123 aa8.61□□□□□ -1.03
PFDN1-201ENST00000261813 EPDR1Q9UM22 224 aa8.61□□□□□ -1.03
PFDN1-201ENST00000261813 SORL1Q92673 2214 aa8.6□□□□□ -1.03
PFDN1-201ENST00000261813 OR11H12B2RN74 326 aa8.6□□□□□ -1.03
PFDN1-201ENST00000261813 GGTLC3B5MD39 225 aa8.6□□□□□ -1.03
PFDN1-201ENST00000261813 K7EQG2 157 aa8.6□□□□□ -1.03
PFDN1-201ENST00000261813 IGHV4-30-4P0DP06 118 aa8.6□□□□□ -1.03
PFDN1-201ENST00000261813 S100A1P23297 94 aa8.6□□□□□ -1.03
PFDN1-201ENST00000261813 ATP5G3P48201 142 aa8.6□□□□□ -1.03
PFDN1-201ENST00000261813 ODF3L2Q3SX64 289 aa8.6□□□□□ -1.03
PFDN1-201ENST00000261813 FAM24BQ8N5W8 94 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms