RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 ORMDL3Q8N138 153 aa12.55□□□□□ -0.4
LMNB1-201ENST00000261366 IFI27L1Q96BM0 104 aa12.55□□□□□ -0.4
LMNB1-201ENST00000261366 BSNQ9UPA5 3926 aa12.54□□□□□ -0.4
LMNB1-201ENST00000261366 TMEM178BH3BS89 294 aa12.54□□□□□ -0.4
LMNB1-201ENST00000261366 BOD1L2Q8IYS8 172 aa12.54□□□□□ -0.4
LMNB1-201ENST00000261366 SCNM1Q9BWG6 230 aa12.54□□□□□ -0.4
LMNB1-201ENST00000261366 MSRB1Q9NZV6 116 aa12.54□□□□□ -0.4
LMNB1-201ENST00000261366 TEX22C9J3V5 150 aa12.54□□□□□ -0.4
LMNB1-201ENST00000261366 K7EM74 188 aa12.54□□□□□ -0.4
LMNB1-201ENST00000261366 EVI2AP22794 236 aa12.54□□□□□ -0.4
LMNB1-201ENST00000261366 PPIFP30405 207 aaKnown RBP12.54□□□□□ -0.4
LMNB1-201ENST00000261366 PLP1P60201 277 aa12.54□□□□□ -0.4
LMNB1-201ENST00000261366 BSPH1Q075Z2 132 aa12.54□□□□□ -0.4
LMNB1-201ENST00000261366 NPIPB5A8MRT5 1133 aa12.53□□□□□ -0.4
LMNB1-201ENST00000261366 HBDP02042 147 aa12.53□□□□□ -0.4
LMNB1-201ENST00000261366 HSD52Q0P140 79 aa12.53□□□□□ -0.4
LMNB1-201ENST00000261366 JKAMPQ9P055 326 aa12.53□□□□□ -0.4
LMNB1-201ENST00000261366 G3V4G9 280 aa12.53□□□□□ -0.4
LMNB1-201ENST00000261366 GNG7O60262 68 aa12.53□□□□□ -0.4
LMNB1-201ENST00000261366 SH2D1AO60880 128 aa12.53□□□□□ -0.4
LMNB1-201ENST00000261366 FAM104BQ5XKR9 115 aa12.53□□□□□ -0.4
LMNB1-201ENST00000261366 TMEM108Q6UXF1 575 aa12.53□□□□□ -0.4
LMNB1-201ENST00000261366 IGKV2D-26A0A0A0MRZ7 120 aa12.52□□□□□ -0.4
LMNB1-201ENST00000261366 ADAMTSL5Q6ZMM2 481 aa12.52□□□□□ -0.4
LMNB1-201ENST00000261366 A0A1W2PPM0 123 aa12.52□□□□□ -0.41
LMNB1-201ENST00000261366 I3L2K1 104 aa12.52□□□□□ -0.41
LMNB1-201ENST00000261366 NDUFS7O75251 213 aa12.52□□□□□ -0.41
LMNB1-201ENST00000261366 FXYD2P54710 66 aa12.52□□□□□ -0.41
LMNB1-201ENST00000261366 C16orf54Q6UWD8 224 aa12.52□□□□□ -0.41
LMNB1-201ENST00000261366 MTURNQ8N3F0 131 aa12.52□□□□□ -0.41
LMNB1-201ENST00000261366 DYNLRB1Q9NP97 96 aa12.52□□□□□ -0.41
LMNB1-201ENST00000261366 IGHV1-3A0A0C4DH29 117 aa12.51□□□□□ -0.41
LMNB1-201ENST00000261366 CEACAM4O75871 244 aa12.51□□□□□ -0.41
LMNB1-201ENST00000261366 RNF125Q96EQ8 232 aa12.51□□□□□ -0.41
LMNB1-201ENST00000261366 SHANK2-AS3Q9BTD1 123 aa12.51□□□□□ -0.41
LMNB1-201ENST00000261366 PRSS1P07477 247 aa12.51□□□□□ -0.41
LMNB1-201ENST00000261366 HLA-DMBP28068 263 aa12.51□□□□□ -0.41
LMNB1-201ENST00000261366 LGALS9BQ3B8N2 356 aa12.51□□□□□ -0.41
LMNB1-201ENST00000261366 C1orf185Q5T7R7 199 aa12.51□□□□□ -0.41
LMNB1-201ENST00000261366 LGALS9CQ6DKI2 356 aa12.51□□□□□ -0.41
LMNB1-201ENST00000261366 FABP2P12104 132 aa12.5□□□□□ -0.41
LMNB1-201ENST00000261366 GATA1P15976 413 aaPredicted RBP12.5□□□□□ -0.41
LMNB1-201ENST00000261366 TMEM155Q4W5P6 130 aa12.5□□□□□ -0.41
LMNB1-201ENST00000261366 SAMD5Q5TGI4 173 aa12.5□□□□□ -0.41
LMNB1-201ENST00000261366 ABHD17AQ96GS6 310 aa12.5□□□□□ -0.41
LMNB1-201ENST00000261366 TMEM14CQ9P0S9 112 aa12.5□□□□□ -0.41
LMNB1-201ENST00000261366 CEP295Q9C0D2 2601 aa12.5□□□□□ -0.41
LMNB1-201ENST00000261366 GTSCR1Q86UQ5 136 aa12.5□□□□□ -0.41
LMNB1-201ENST00000261366 ZNF491Q8N8L2 437 aa12.5□□□□□ -0.41
LMNB1-201ENST00000261366 RPEQ96AT9 228 aa12.5□□□□□ -0.41
LMNB1-201ENST00000261366 NPFFR1Q9GZQ6 430 aa12.5□□□□□ -0.41
LMNB1-201ENST00000261366 TEX48A0A1B0GUV7 120 aa12.49□□□□□ -0.41
LMNB1-201ENST00000261366 EGR2P11161 476 aaPredicted RBP12.49□□□□□ -0.41
LMNB1-201ENST00000261366 HOXB4P17483 251 aaPredicted RBP12.49□□□□□ -0.41
LMNB1-201ENST00000261366 IGF2-ASQ6U949 168 aa12.49□□□□□ -0.41
LMNB1-201ENST00000261366 GTSF1LQ9H1H1 148 aa12.49□□□□□ -0.41
LMNB1-201ENST00000261366 AAMDCQ9H7C9 122 aa12.49□□□□□ -0.41
LMNB1-201ENST00000261366 SPTA1P02549 2419 aa12.49□□□□□ -0.41
LMNB1-201ENST00000261366 ORM1P02763 201 aa12.49□□□□□ -0.41
LMNB1-201ENST00000261366 DLX6P56179 175 aa12.49□□□□□ -0.41
LMNB1-201ENST00000261366 NHP2Q9NX24 153 aaKnown RBP12.49□□□□□ -0.41
LMNB1-201ENST00000261366 K7EIM0 57 aa12.48□□□□□ -0.41
LMNB1-201ENST00000261366 LEPP41159 167 aa12.48□□□□□ -0.41
LMNB1-201ENST00000261366 ZNF80P51504 273 aaPredicted RBP12.48□□□□□ -0.41
LMNB1-201ENST00000261366 RBPJQ06330 500 aa12.48□□□□□ -0.41
LMNB1-201ENST00000261366 LINC00311Q8N616 119 aa12.48□□□□□ -0.41
LMNB1-201ENST00000261366 H3BRN7 92 aa12.48□□□□□ -0.41
LMNB1-201ENST00000261366 OR9G4Q8NGQ1 327 aa12.48□□□□□ -0.41
LMNB1-201ENST00000261366 SPTBN1Q01082 2364 aaKnown RBP12.48□□□□□ -0.41
LMNB1-201ENST00000261366 PPIAL4CA0A0B4J2A2 164 aa12.47□□□□□ -0.41
LMNB1-201ENST00000261366 CRYGBP07316 175 aa12.47□□□□□ -0.41
LMNB1-201ENST00000261366 SMIM13P0DJ93 91 aa12.47□□□□□ -0.41
LMNB1-201ENST00000261366 PPIAL4GP0DN37 164 aa12.47□□□□□ -0.41
LMNB1-201ENST00000261366 OR4X2Q8NGF9 303 aa12.47□□□□□ -0.41
LMNB1-201ENST00000261366 VGLL1Q99990 258 aa12.47□□□□□ -0.41
LMNB1-201ENST00000261366 CUL9Q8IWT3 2517 aa12.47□□□□□ -0.41
LMNB1-201ENST00000261366 SMAGPQ0VAQ4 97 aa12.47□□□□□ -0.41
LMNB1-201ENST00000261366 HES1Q14469 280 aa12.47□□□□□ -0.41
LMNB1-201ENST00000261366 FCER1GP30273 86 aa12.46□□□□□ -0.41
LMNB1-201ENST00000261366 ZNF493Q6ZR52 646 aa12.46□□□□□ -0.41
LMNB1-201ENST00000261366 NEGR1Q7Z3B1 354 aa12.46□□□□□ -0.41
LMNB1-201ENST00000261366 FOXC2Q99958 501 aa12.46□□□□□ -0.41
LMNB1-201ENST00000261366 BUB1B-PAK6H3BSN5 160 aa12.46□□□□□ -0.42
LMNB1-201ENST00000261366 TMEM11P17152 192 aa12.46□□□□□ -0.42
LMNB1-201ENST00000261366 Q6AWC8 147 aa12.46□□□□□ -0.42
LMNB1-201ENST00000261366 IGFL3Q6UXB1 125 aa12.46□□□□□ -0.42
LMNB1-201ENST00000261366 Q6ZS92 163 aa12.46□□□□□ -0.42
LMNB1-201ENST00000261366 LCNL1Q6ZST4 164 aa12.46□□□□□ -0.42
LMNB1-201ENST00000261366 COL25A1Q9BXS0 654 aaPredicted RBP12.46□□□□□ -0.42
LMNB1-201ENST00000261366 A0A1B0GW15 77 aa12.45□□□□□ -0.42
LMNB1-201ENST00000261366 C16orf97H3BN30 126 aa12.45□□□□□ -0.42
LMNB1-201ENST00000261366 TIMM23O14925 209 aa12.45□□□□□ -0.42
LMNB1-201ENST00000261366 S100A7AQ86SG5 101 aa12.45□□□□□ -0.42
LMNB1-201ENST00000261366 TMEM160Q9NX00 188 aa12.45□□□□□ -0.42
LMNB1-201ENST00000261366 WI2-2373I1.2A0A1W2PRP0 233 aa12.45□□□□□ -0.42
LMNB1-201ENST00000261366 ONECUT1Q9UBC0 465 aa12.45□□□□□ -0.42
LMNB1-201ENST00000261366 PVRIGQ6DKI7 326 aa12.44□□□□□ -0.42
LMNB1-201ENST00000261366 CHAC1Q9BUX1 264 aa12.44□□□□□ -0.42
LMNB1-201ENST00000261366 AGRNO00468 2067 aa12.44□□□□□ -0.42
LMNB1-201ENST00000261366 IGHV3OR16-13A0A075B7E8 117 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 2992 ms