RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 S100A7L2Q5SY68 101 aa15.19■□□□□ 0.02
PTPRE-201ENST00000254667 RNF138Q8WVD3 245 aa15.19■□□□□ 0.02
PTPRE-201ENST00000254667 ERG28Q9UKR5 140 aa15.19■□□□□ 0.02
PTPRE-201ENST00000254667 AMN1Q8IY45 258 aa15.19■□□□□ 0.02
PTPRE-201ENST00000254667 POU2AF1Q16633 256 aa15.19■□□□□ 0.02
PTPRE-201ENST00000254667 TMEM158Q8WZ71 300 aa15.19■□□□□ 0.02
PTPRE-201ENST00000254667 IGHV3-64A0A075B6Q5 118 aa15.18■□□□□ 0.02
PTPRE-201ENST00000254667 Q8NFD4 153 aa15.18■□□□□ 0.02
PTPRE-201ENST00000254667 MYLKQ15746 1914 aa15.18■□□□□ 0.02
PTPRE-201ENST00000254667 KIAA2026Q5HYC2 2103 aa15.18■□□□□ 0.02
PTPRE-201ENST00000254667 C21orf62-AS1Q17RA5 79 aa15.18■□□□□ 0.02
PTPRE-201ENST00000254667 DMRTA1Q5VZB9 504 aa15.18■□□□□ 0.02
PTPRE-201ENST00000254667 ZNF479Q96JC4 524 aa15.18■□□□□ 0.02
PTPRE-201ENST00000254667 PKDREJQ9NTG1 2253 aa15.18■□□□□ 0.02
PTPRE-201ENST00000254667 IGHV4-39P01824 125 aa15.18■□□□□ 0.02
PTPRE-201ENST00000254667 NUP210Q8TEM1 1887 aaPredicted RBP15.17■□□□□ 0.02
PTPRE-201ENST00000254667 ABCA4P78363 2273 aa15.17■□□□□ 0.02
PTPRE-201ENST00000254667 LINC00479Q96M42 142 aa15.17■□□□□ 0.02
PTPRE-201ENST00000254667 ZNF407Q9C0G0 2248 aa15.17■□□□□ 0.02
PTPRE-201ENST00000254667 MST1LQ2TV78 715 aa15.17■□□□□ 0.02
PTPRE-201ENST00000254667 H3BRN7 92 aa15.17■□□□□ 0.02
PTPRE-201ENST00000254667 H3BUA1 57 aa15.17■□□□□ 0.02
PTPRE-201ENST00000254667 TMEM256Q8N2U0 113 aa15.17■□□□□ 0.02
PTPRE-201ENST00000254667 PRSS46E5RG02 174 aa15.16■□□□□ 0.02
PTPRE-201ENST00000254667 WT1-ASQ06250 92 aa15.16■□□□□ 0.02
PTPRE-201ENST00000254667 GGTLC3B5MD39 225 aa15.16■□□□□ 0.02
PTPRE-201ENST00000254667 SYS1-DBNDD2H3BUS1 97 aa15.16■□□□□ 0.02
PTPRE-201ENST00000254667 ELANEP08246 267 aa15.16■□□□□ 0.02
PTPRE-201ENST00000254667 C1orf159Q96HA4 380 aa15.16■□□□□ 0.02
PTPRE-201ENST00000254667 MAPK1IP1LQ8NDC0 245 aa15.16■□□□□ 0.02
PTPRE-201ENST00000254667 LY6G5BQ8NDX9 201 aa15.16■□□□□ 0.02
PTPRE-201ENST00000254667 A0A087WWL8 130 aa15.16■□□□□ 0.02
PTPRE-201ENST00000254667 ZNF134P52741 427 aa15.15■□□□□ 0.02
PTPRE-201ENST00000254667 CACNA1HO95180 2353 aa15.15■□□□□ 0.02
PTPRE-201ENST00000254667 A0A0U1RRA0 63 aa15.15■□□□□ 0.02
PTPRE-201ENST00000254667 SHISA9B4DS77 424 aa15.15■□□□□ 0.02
PTPRE-201ENST00000254667 C3orf79P0CE67 100 aa15.15■□□□□ 0.02
PTPRE-201ENST00000254667 ATXN8Q156A1 80 aa15.15■□□□□ 0.02
PTPRE-201ENST00000254667 JPT2Q9H910 190 aa15.15■□□□□ 0.02
PTPRE-201ENST00000254667 TNFRSF6BO95407 300 aa15.15■□□□□ 0.02
PTPRE-201ENST00000254667 TRAV8-2A0A0B4J237 113 aa15.14■□□□□ 0.01
PTPRE-201ENST00000254667 C8orf86Q6ZUL3 223 aa15.14■□□□□ 0.01
PTPRE-201ENST00000254667 THAP8Q8NA92 274 aa15.14■□□□□ 0.01
PTPRE-201ENST00000254667 FNDC4Q9H6D8 234 aaPredicted RBP15.14■□□□□ 0.01
PTPRE-201ENST00000254667 DKK1O94907 266 aa15.14■□□□□ 0.01
PTPRE-201ENST00000254667 TDGF1P3P51864 188 aa15.14■□□□□ 0.01
PTPRE-201ENST00000254667 GUSBP1Q15486 140 aa15.14■□□□□ 0.01
PTPRE-201ENST00000254667 SS18Q15532 418 aa15.14■□□□□ 0.01
PTPRE-201ENST00000254667 MCRIP2Q9BUT9 160 aaKnown RBP15.14■□□□□ 0.01
PTPRE-201ENST00000254667 MYMXA0A1B0GTQ4 84 aa15.14■□□□□ 0.01
PTPRE-201ENST00000254667 MMP23AO75900 390 aa15.14■□□□□ 0.01
PTPRE-201ENST00000254667 IGHV2-70P01814 119 aa15.13■□□□□ 0.01
PTPRE-201ENST00000254667 Q0VG73 95 aa15.13■□□□□ 0.01
PTPRE-201ENST00000254667 A8MWV9 139 aa15.13■□□□□ 0.01
PTPRE-201ENST00000254667 TCF15Q12870 199 aa15.13■□□□□ 0.01
PTPRE-201ENST00000254667 C6orf226Q5I0X4 101 aa15.13■□□□□ 0.01
PTPRE-201ENST00000254667 USF3Q68DE3 2245 aa15.13■□□□□ 0.01
PTPRE-201ENST00000254667 ADCYAP1P18509 176 aa15.13■□□□□ 0.01
PTPRE-201ENST00000254667 FAM231DQ6ZW35 169 aa15.13■□□□□ 0.01
PTPRE-201ENST00000254667 IGHV2-5P01817 119 aa15.13■□□□□ 0.01
PTPRE-201ENST00000254667 DEFB130BP0DP73 79 aa15.13■□□□□ 0.01
PTPRE-201ENST00000254667 DEFB130AP0DP74 79 aa15.13■□□□□ 0.01
PTPRE-201ENST00000254667 SFTA2Q6UW10 78 aa15.13■□□□□ 0.01
PTPRE-201ENST00000254667 PAX4O43316 350 aa15.13■□□□□ 0.01
PTPRE-201ENST00000254667 SAMD5Q5TGI4 173 aa15.13■□□□□ 0.01
PTPRE-201ENST00000254667 DMRTC2Q8IXT2 367 aaPredicted RBP15.13■□□□□ 0.01
PTPRE-201ENST00000254667 PHLDA1Q8WV24 401 aaPredicted RBP15.12■□□□□ 0.01
PTPRE-201ENST00000254667 SMKR1H3BMG3 65 aa15.12■□□□□ 0.01
PTPRE-201ENST00000254667 RIPPLY3P57055 190 aa15.12■□□□□ 0.01
PTPRE-201ENST00000254667 TCTEX1D4Q5JR98 221 aa15.12■□□□□ 0.01
PTPRE-201ENST00000254667 CST9LQ9H4G1 147 aa15.12■□□□□ 0.01
PTPRE-201ENST00000254667 IGHV1OR15-1A0A075B7D0 117 aa15.12■□□□□ 0.01
PTPRE-201ENST00000254667 BCL6BQ8N143 479 aaPredicted RBP15.12■□□□□ 0.01
PTPRE-201ENST00000254667 TPSG1Q9NRR2 321 aa15.11■□□□□ 0.01
PTPRE-201ENST00000254667 XCL2Q9UBD3 114 aa15.11■□□□□ 0.01
PTPRE-201ENST00000254667 SPINK13Q1W4C9 94 aa15.11■□□□□ 0.01
PTPRE-201ENST00000254667 WT1P19544 449 aaPredicted RBP15.11■□□□□ 0.01
PTPRE-201ENST00000254667 FAM104BQ5XKR9 115 aa15.11■□□□□ 0.01
PTPRE-201ENST00000254667 TIMM21Q9BVV7 248 aa15.11■□□□□ 0.01
PTPRE-201ENST00000254667 IGLC1P0CG04 106 aa15.11■□□□□ 0.01
PTPRE-201ENST00000254667 PRR25Q96S07 402 aa15.11■□□□□ 0.01
PTPRE-201ENST00000254667 HEATR5AQ86XA9 2040 aa15.1■□□□□ 0.01
PTPRE-201ENST00000254667 PRR31Q5SQ13 230 aa15.1■□□□□ 0.01
PTPRE-201ENST00000254667 ZC2HC1BQ5TFG8 222 aa15.1■□□□□ 0.01
PTPRE-201ENST00000254667 NBASA2RRP1 2371 aa15.1■□□□□ 0.01
PTPRE-201ENST00000254667 HELZP42694 1942 aaKnown RBP15.1■□□□□ 0.01
PTPRE-201ENST00000254667 CDKN1BP46527 198 aa15.1■□□□□ 0.01
PTPRE-201ENST00000254667 C8orf49Q96NF6 230 aa15.1■□□□□ 0.01
PTPRE-201ENST00000254667 TMEM95Q3KNT9 176 aa15.09■□□□□ 0.01
PTPRE-201ENST00000254667 NOTCH4Q99466 2003 aa15.09■□□□□ 0.01
PTPRE-201ENST00000254667 C22orf46C9J442 243 aa15.09■□□□□ 0.01
PTPRE-201ENST00000254667 C11orf53Q8IXP5 236 aa15.09■□□□□ 0.01
PTPRE-201ENST00000254667 TMEM141Q96I45 108 aa15.09■□□□□ 0.01
PTPRE-201ENST00000254667 TRAV13-1A0A0B4J241 112 aa15.09■□□□□ 0.01
PTPRE-201ENST00000254667 K7EM74 188 aa15.08■□□□□ 0.01
PTPRE-201ENST00000254667 OVOL2Q9BRP0 275 aa15.08■□□□□ 0.01
PTPRE-201ENST00000254667 IGHV7-4-1A0A0J9YVY3 117 aa15.08■□□□□ 0
PTPRE-201ENST00000254667 A0A1B0GV72 72 aa15.08■□□□□ 0
PTPRE-201ENST00000254667 PSCAO43653 123 aa15.08■□□□□ 0
PTPRE-201ENST00000254667 GAGE13Q4V321 117 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms