RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 TPSG1Q9NRR2 321 aa6.97□□□□□ -1.29
PTCD3-201ENST00000254630 TMEM213A2RRL7 107 aa6.96□□□□□ -1.29
PTCD3-201ENST00000254630 SHISA9B4DS77 424 aa6.96□□□□□ -1.29
PTCD3-201ENST00000254630 C15orf65H3BRN8 121 aa6.96□□□□□ -1.29
PTCD3-201ENST00000254630 WISP1O95388 367 aa6.96□□□□□ -1.29
PTCD3-201ENST00000254630 ESDP10768 282 aa6.96□□□□□ -1.29
PTCD3-201ENST00000254630 LY6G5BQ8NDX9 201 aa6.96□□□□□ -1.29
PTCD3-201ENST00000254630 TRBV19A0A075B6N1 114 aa6.96□□□□□ -1.29
PTCD3-201ENST00000254630 SYS1-DBNDD2H3BUS1 97 aa6.96□□□□□ -1.29
PTCD3-201ENST00000254630 ZNF561-AS1K7EIQ3 104 aa6.96□□□□□ -1.29
PTCD3-201ENST00000254630 GAGE2EQ4V326 116 aa6.96□□□□□ -1.29
PTCD3-201ENST00000254630 GAGE2DQ9UEU5 116 aa6.96□□□□□ -1.29
PTCD3-201ENST00000254630 TP53TG1Q9Y2A0 90 aa6.96□□□□□ -1.29
PTCD3-201ENST00000254630 TRAV12-2A0A075B6T6 113 aa6.96□□□□□ -1.3
PTCD3-201ENST00000254630 GAGE12BA1L429 117 aa6.96□□□□□ -1.3
PTCD3-201ENST00000254630 RHODO00212 210 aa6.96□□□□□ -1.3
PTCD3-201ENST00000254630 GAGE7O76087 117 aa6.96□□□□□ -1.3
PTCD3-201ENST00000254630 GAGE12FP0CL80 117 aa6.96□□□□□ -1.3
PTCD3-201ENST00000254630 GAGE12GP0CL81 117 aa6.96□□□□□ -1.3
PTCD3-201ENST00000254630 GAGE12IP0CL82 117 aa6.96□□□□□ -1.3
PTCD3-201ENST00000254630 IGHV2-5P01817 119 aa6.96□□□□□ -1.3
PTCD3-201ENST00000254630 BCL6BQ8N143 479 aaPredicted RBP6.96□□□□□ -1.3
PTCD3-201ENST00000254630 KLF12Q9Y4X4 402 aa6.96□□□□□ -1.3
PTCD3-201ENST00000254630 ZNF134P52741 427 aa6.96□□□□□ -1.3
PTCD3-201ENST00000254630 LINC00479Q96M42 142 aa6.96□□□□□ -1.3
PTCD3-201ENST00000254630 TMEM14CQ9P0S9 112 aa6.96□□□□□ -1.3
PTCD3-201ENST00000254630 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.95□□□□□ -1.3
PTCD3-201ENST00000254630 EREGO14944 169 aa6.95□□□□□ -1.3
PTCD3-201ENST00000254630 MEGF9Q9H1U4 602 aa6.95□□□□□ -1.3
PTCD3-201ENST00000254630 TSSC4Q9Y5U2 329 aaPredicted RBP6.95□□□□□ -1.3
PTCD3-201ENST00000254630 KMT2EQ8IZD2 1858 aa6.95□□□□□ -1.3
PTCD3-201ENST00000254630 IGHV7-4-1A0A0J9YVY3 117 aa6.95□□□□□ -1.3
PTCD3-201ENST00000254630 H3BUA1 57 aa6.95□□□□□ -1.3
PTCD3-201ENST00000254630 Q8N8P6 123 aa6.95□□□□□ -1.3
PTCD3-201ENST00000254630 ZMAT4Q9H898 229 aa6.95□□□□□ -1.3
PTCD3-201ENST00000254630 PRIMA1Q86XR5 153 aa6.95□□□□□ -1.3
PTCD3-201ENST00000254630 ANXA2RQ3ZCQ2 193 aa6.95□□□□□ -1.3
PTCD3-201ENST00000254630 HAPLN4Q86UW8 402 aa6.94□□□□□ -1.3
PTCD3-201ENST00000254630 A0A087X0K7 114 aa6.94□□□□□ -1.3
PTCD3-201ENST00000254630 TRAV26-2A0A0B4J265 109 aa6.94□□□□□ -1.3
PTCD3-201ENST00000254630 IGHV2-70P01814 119 aa6.94□□□□□ -1.3
PTCD3-201ENST00000254630 DIAPH2-AS1Q14236 149 aa6.94□□□□□ -1.3
PTCD3-201ENST00000254630 TMEM256Q8N2U0 113 aa6.94□□□□□ -1.3
PTCD3-201ENST00000254630 IGLV3-9A0A075B6K5 115 aa6.94□□□□□ -1.3
PTCD3-201ENST00000254630 CDKN1BP46527 198 aa6.94□□□□□ -1.3
PTCD3-201ENST00000254630 RMI2Q96E14 147 aa6.94□□□□□ -1.3
PTCD3-201ENST00000254630 ANAPC13Q9BS18 74 aa6.94□□□□□ -1.3
PTCD3-201ENST00000254630 ABCA7Q8IZY2 2146 aa6.94□□□□□ -1.3
PTCD3-201ENST00000254630 PLXNB3Q9ULL4 1909 aa6.94□□□□□ -1.3
PTCD3-201ENST00000254630 DEFB113Q30KQ7 82 aa6.94□□□□□ -1.3
PTCD3-201ENST00000254630 C2orf82Q6UX34 121 aa6.94□□□□□ -1.3
PTCD3-201ENST00000254630 TMEM243Q9BU79 118 aa6.94□□□□□ -1.3
PTCD3-201ENST00000254630 C3orf79P0CE67 100 aa6.94□□□□□ -1.3
PTCD3-201ENST00000254630 HIST1H4AP62805 103 aaKnown RBP6.94□□□□□ -1.3
PTCD3-201ENST00000254630 GAGE6Q13070 117 aa6.94□□□□□ -1.3
PTCD3-201ENST00000254630 PMVKQ15126 192 aa6.94□□□□□ -1.3
PTCD3-201ENST00000254630 CHAC1Q9BUX1 264 aa6.94□□□□□ -1.3
PTCD3-201ENST00000254630 VWC2LB2RUY7 222 aa6.94□□□□□ -1.3
PTCD3-201ENST00000254630 NKAPP1Q8N9T2 125 aa6.94□□□□□ -1.3
PTCD3-201ENST00000254630 VPREB3Q9UKI3 123 aa6.93□□□□□ -1.3
PTCD3-201ENST00000254630 COL4A4P53420 1690 aaPredicted RBP6.93□□□□□ -1.3
PTCD3-201ENST00000254630 IGHV3-38A0A0C4DH36 116 aa6.93□□□□□ -1.3
PTCD3-201ENST00000254630 DEFB112Q30KQ8 113 aa6.93□□□□□ -1.3
PTCD3-201ENST00000254630 ZNF524Q96C55 264 aa6.93□□□□□ -1.3
PTCD3-201ENST00000254630 TRAV8-3A0A0A6YYJ7 113 aa6.93□□□□□ -1.3
PTCD3-201ENST00000254630 ELANEP08246 267 aa6.93□□□□□ -1.3
PTCD3-201ENST00000254630 TCF15Q12870 199 aa6.93□□□□□ -1.3
PTCD3-201ENST00000254630 SMIM27A0A1W2PRY6 76 aa6.92□□□□□ -1.3
PTCD3-201ENST00000254630 CGB3P0DN86 165 aa6.92□□□□□ -1.3
PTCD3-201ENST00000254630 VWC2Q2TAL6 325 aa6.92□□□□□ -1.3
PTCD3-201ENST00000254630 DLX4Q92988 240 aaPredicted RBP6.92□□□□□ -1.3
PTCD3-201ENST00000254630 DNAJC30Q96LL9 226 aa6.92□□□□□ -1.3
PTCD3-201ENST00000254630 SPAG8Q99932 426 aaPredicted RBP6.92□□□□□ -1.3
PTCD3-201ENST00000254630 KIAA1549LQ6ZVL6 1849 aa6.92□□□□□ -1.3
PTCD3-201ENST00000254630 CT83Q5H943 113 aa6.92□□□□□ -1.3
PTCD3-201ENST00000254630 ZNRF2Q8NHG8 242 aa6.92□□□□□ -1.3
PTCD3-201ENST00000254630 MRPL51Q4U2R6 128 aaKnown RBP6.92□□□□□ -1.3
PTCD3-201ENST00000254630 SIGMAR1Q99720 223 aa6.92□□□□□ -1.3
PTCD3-201ENST00000254630 HEATR5BQ9P2D3 2071 aa6.92□□□□□ -1.3
PTCD3-201ENST00000254630 C8orf31Q8N9H6 132 aa6.92□□□□□ -1.3
PTCD3-201ENST00000254630 IGF2BP2-AS1Q96M15 143 aa6.92□□□□□ -1.3
PTCD3-201ENST00000254630 IGKV1-39P01597 117 aa6.92□□□□□ -1.3
PTCD3-201ENST00000254630 IGKV1D-39P04432 117 aa6.92□□□□□ -1.3
PTCD3-201ENST00000254630 PCP4P48539 62 aa6.92□□□□□ -1.3
PTCD3-201ENST00000254630 NAA38Q9BRA0 125 aaKnown RBP6.92□□□□□ -1.3
PTCD3-201ENST00000254630 MMP23AO75900 390 aa6.91□□□□□ -1.3
PTCD3-201ENST00000254630 FAM104BQ5XKR9 115 aa6.91□□□□□ -1.3
PTCD3-201ENST00000254630 GRNP28799 593 aaKnown RBP6.91□□□□□ -1.3
PTCD3-201ENST00000254630 KIR3DS1Q14943 382 aa6.91□□□□□ -1.3
PTCD3-201ENST00000254630 ZNF114Q8NC26 417 aa6.91□□□□□ -1.3
PTCD3-201ENST00000254630 CYYR1Q96J86 154 aa6.91□□□□□ -1.3
PTCD3-201ENST00000254630 FOXI2Q6ZQN5 318 aa6.91□□□□□ -1.3
PTCD3-201ENST00000254630 OBSL1O75147 1896 aa6.91□□□□□ -1.3
PTCD3-201ENST00000254630 K7EM74 188 aa6.91□□□□□ -1.3
PTCD3-201ENST00000254630 IGHV4-59P01825 116 aa6.91□□□□□ -1.3
PTCD3-201ENST00000254630 ZNF726P1Q15940 193 aa6.91□□□□□ -1.3
PTCD3-201ENST00000254630 A0A096LPF7 62 aa6.91□□□□□ -1.3
PTCD3-201ENST00000254630 FAM231BA6NCW3 169 aa6.91□□□□□ -1.3
PTCD3-201ENST00000254630 PRB1P04280 392 aa6.91□□□□□ -1.3
PTCD3-201ENST00000254630 IGF2-ASQ6U949 168 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms