RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 PAX2Q02962 417 aa12.35□□□□□ -0.43
LRFN1-201ENST00000248668 PIP4P2Q8N4L2 257 aa12.35□□□□□ -0.43
LRFN1-201ENST00000248668 Q8N9W7 124 aa12.35□□□□□ -0.43
LRFN1-201ENST00000248668 SRSF8Q9BRL6 282 aaKnown RBP12.35□□□□□ -0.43
LRFN1-201ENST00000248668 CHRDL1Q9BU40 450 aa12.35□□□□□ -0.43
LRFN1-201ENST00000248668 LINC00527Q9UJ94 153 aa12.35□□□□□ -0.43
LRFN1-201ENST00000248668 KLF12Q9Y4X4 402 aa12.35□□□□□ -0.43
LRFN1-201ENST00000248668 TRBV19A0A075B6N1 114 aa12.35□□□□□ -0.43
LRFN1-201ENST00000248668 TRBV9A0A0B4J1U6 114 aa12.35□□□□□ -0.43
LRFN1-201ENST00000248668 G3V318 75 aa12.35□□□□□ -0.43
LRFN1-201ENST00000248668 IGHV4-39P01824 125 aa12.35□□□□□ -0.43
LRFN1-201ENST00000248668 C3orf79P0CE67 100 aa12.35□□□□□ -0.43
LRFN1-201ENST00000248668 NIT1Q86X76 327 aa12.35□□□□□ -0.43
LRFN1-201ENST00000248668 TSKUQ8WUA8 353 aa12.35□□□□□ -0.43
LRFN1-201ENST00000248668 FMC1Q96HJ9 113 aa12.35□□□□□ -0.43
LRFN1-201ENST00000248668 MLST8Q9BVC4 326 aa12.35□□□□□ -0.43
LRFN1-201ENST00000248668 IGHV3OR16-13A0A075B7E8 117 aa12.34□□□□□ -0.43
LRFN1-201ENST00000248668 IGHV3-74A0A0B4J1X5 117 aa12.34□□□□□ -0.43
LRFN1-201ENST00000248668 LTAP01374 205 aa12.34□□□□□ -0.43
LRFN1-201ENST00000248668 HLA-DQA1P01909 254 aa12.34□□□□□ -0.43
LRFN1-201ENST00000248668 MT-ND6P03923 174 aa12.34□□□□□ -0.43
LRFN1-201ENST00000248668 FAM106CPP0CH98 169 aa12.34□□□□□ -0.43
LRFN1-201ENST00000248668 EGR2P11161 476 aaPredicted RBP12.34□□□□□ -0.43
LRFN1-201ENST00000248668 COL8A1P27658 744 aa12.34□□□□□ -0.43
LRFN1-201ENST00000248668 BRD3OSQ6XYD6 125 aa12.34□□□□□ -0.43
LRFN1-201ENST00000248668 C1orf122Q6ZSJ8 110 aa12.34□□□□□ -0.43
LRFN1-201ENST00000248668 FAM231DQ6ZW35 169 aa12.34□□□□□ -0.43
LRFN1-201ENST00000248668 Q86TA4 180 aa12.34□□□□□ -0.43
LRFN1-201ENST00000248668 Q8N6K4 173 aa12.34□□□□□ -0.43
LRFN1-201ENST00000248668 NAA38Q9BRA0 125 aaKnown RBP12.34□□□□□ -0.43
LRFN1-201ENST00000248668 RPP21Q9H633 154 aaKnown RBP12.34□□□□□ -0.43
LRFN1-201ENST00000248668 MINOS1Q5TGZ0 78 aa12.34□□□□□ -0.43
LRFN1-201ENST00000248668 GTSF1Q8WW33 167 aa12.34□□□□□ -0.43
LRFN1-201ENST00000248668 MINOS1-NBL1R4GNA1 71 aa12.34□□□□□ -0.43
LRFN1-201ENST00000248668 IGHV3-66A0A0C4DH42 116 aa12.33□□□□□ -0.44
LRFN1-201ENST00000248668 GPR183P32249 361 aa12.33□□□□□ -0.44
LRFN1-201ENST00000248668 TPPP3Q9BW30 176 aa12.33□□□□□ -0.44
LRFN1-201ENST00000248668 MYO9AB2RTY4 2548 aa12.33□□□□□ -0.44
LRFN1-201ENST00000248668 ZNF462Q96JM2 2506 aa12.33□□□□□ -0.44
LRFN1-201ENST00000248668 NPIPB5A8MRT5 1133 aa12.33□□□□□ -0.44
LRFN1-201ENST00000248668 ATP6V0E1O15342 81 aa12.33□□□□□ -0.44
LRFN1-201ENST00000248668 AJUBAQ96IF1 538 aa12.33□□□□□ -0.44
LRFN1-201ENST00000248668 IGLV2-11P01706 119 aa12.32□□□□□ -0.44
LRFN1-201ENST00000248668 UBE2E1P51965 193 aa12.32□□□□□ -0.44
LRFN1-201ENST00000248668 FOXA3P55318 350 aaPredicted RBP12.32□□□□□ -0.44
LRFN1-201ENST00000248668 SIGLEC15Q6ZMC9 328 aa12.32□□□□□ -0.44
LRFN1-201ENST00000248668 TTC9CQ8N5M4 171 aa12.32□□□□□ -0.44
LRFN1-201ENST00000248668 TMEM14CQ9P0S9 112 aa12.32□□□□□ -0.44
LRFN1-201ENST00000248668 SOX21Q9Y651 276 aaPredicted RBP12.32□□□□□ -0.44
LRFN1-201ENST00000248668 GAGE12BA1L429 117 aa12.32□□□□□ -0.44
LRFN1-201ENST00000248668 CFAP161Q6P656 301 aa12.32□□□□□ -0.44
LRFN1-201ENST00000248668 SMIM12Q96EX1 92 aa12.32□□□□□ -0.44
LRFN1-201ENST00000248668 H0Y8G0 127 aa12.32□□□□□ -0.44
LRFN1-201ENST00000248668 Q0VG73 95 aa12.32□□□□□ -0.44
LRFN1-201ENST00000248668 C15orf32Q32M92 178 aa12.32□□□□□ -0.44
LRFN1-201ENST00000248668 IGHV3-49A0A0A0MS15 119 aa12.31□□□□□ -0.44
LRFN1-201ENST00000248668 NDUFS8O00217 210 aa12.31□□□□□ -0.44
LRFN1-201ENST00000248668 MPV17L2Q567V2 206 aa12.31□□□□□ -0.44
LRFN1-201ENST00000248668 ZNF414Q96IQ9 312 aa12.31□□□□□ -0.44
LRFN1-201ENST00000248668 WI2-2373I1.2A0A1W2PRP0 233 aa12.31□□□□□ -0.44
LRFN1-201ENST00000248668 A0A1W2PS18 150 aa12.31□□□□□ -0.44
LRFN1-201ENST00000248668 THYN1Q9P016 225 aa12.31□□□□□ -0.44
LRFN1-201ENST00000248668 TRAV30A0A087WSZ9 112 aa12.3□□□□□ -0.44
LRFN1-201ENST00000248668 TMSB15BA0A087X1C1 80 aa12.3□□□□□ -0.44
LRFN1-201ENST00000248668 CTSGP08311 255 aa12.3□□□□□ -0.44
LRFN1-201ENST00000248668 HLA-DMBP28068 263 aa12.3□□□□□ -0.44
LRFN1-201ENST00000248668 SMAGPQ0VAQ4 97 aa12.3□□□□□ -0.44
LRFN1-201ENST00000248668 OR1N2Q8NGR9 330 aa12.3□□□□□ -0.44
LRFN1-201ENST00000248668 NPFFO15130 113 aa12.3□□□□□ -0.44
LRFN1-201ENST00000248668 NRGNQ92686 78 aa12.3□□□□□ -0.44
LRFN1-201ENST00000248668 C8orf49Q96NF6 230 aa12.3□□□□□ -0.44
LRFN1-201ENST00000248668 IGKV2-40A0A087WW87 121 aaPredicted RBP12.3□□□□□ -0.44
LRFN1-201ENST00000248668 IGHV4-61A0A0C4DH41 118 aa12.3□□□□□ -0.44
LRFN1-201ENST00000248668 CENPVL3A0A0U1RRI6 287 aa12.3□□□□□ -0.44
LRFN1-201ENST00000248668 C19orf71A6NCJ1 209 aa12.3□□□□□ -0.44
LRFN1-201ENST00000248668 A8MWL6 223 aa12.3□□□□□ -0.44
LRFN1-201ENST00000248668 ZNF207O43670 478 aaKnown RBP12.3□□□□□ -0.44
LRFN1-201ENST00000248668 NUDT3O95989 172 aa12.3□□□□□ -0.44
LRFN1-201ENST00000248668 IGKV2D-40P01614 121 aaPredicted RBP12.3□□□□□ -0.44
LRFN1-201ENST00000248668 KLHDC1Q8N7A1 406 aa12.3□□□□□ -0.44
LRFN1-201ENST00000248668 C18orf32Q8TCD1 76 aa12.3□□□□□ -0.44
LRFN1-201ENST00000248668 FBLL1A6NHQ2 334 aaKnown RBP12.29□□□□□ -0.44
LRFN1-201ENST00000248668 OOSP1A8MZH6 123 aa12.29□□□□□ -0.44
LRFN1-201ENST00000248668 RHOGP84095 191 aa12.29□□□□□ -0.44
LRFN1-201ENST00000248668 EBI3Q14213 229 aa12.29□□□□□ -0.44
LRFN1-201ENST00000248668 BORCS7Q96B45 105 aa12.29□□□□□ -0.44
LRFN1-201ENST00000248668 C1RLQ9NZP8 487 aa12.29□□□□□ -0.44
LRFN1-201ENST00000248668 ZANQ9Y493 2812 aa12.29□□□□□ -0.44
LRFN1-201ENST00000248668 MRPS12O15235 138 aaKnown RBP12.29□□□□□ -0.44
LRFN1-201ENST00000248668 CLEC3BP05452 202 aa12.29□□□□□ -0.44
LRFN1-201ENST00000248668 ESDP10768 282 aa12.29□□□□□ -0.44
LRFN1-201ENST00000248668 GTSF1LQ9H1H1 148 aa12.29□□□□□ -0.44
LRFN1-201ENST00000248668 PSG8Q9UQ74 426 aa12.29□□□□□ -0.44
LRFN1-201ENST00000248668 TRAV40A0A0B4J280 105 aa12.29□□□□□ -0.44
LRFN1-201ENST00000248668 MUC21A0A0G2JKD1 596 aa12.29□□□□□ -0.44
LRFN1-201ENST00000248668 MUC21A0A140T8X8 626 aa12.29□□□□□ -0.44
LRFN1-201ENST00000248668 ZNF785A8K8V0 405 aa12.29□□□□□ -0.44
LRFN1-201ENST00000248668 MUC21Q5SSG8 566 aa12.29□□□□□ -0.44
LRFN1-201ENST00000248668 RNASEKQ6P5S7 137 aaKnown RBP12.29□□□□□ -0.44
LRFN1-201ENST00000248668 KCNS1Q96KK3 526 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms