RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 GHRHP01286 108 aa12.65□□□□□ -0.38
SIN3B-201ENST00000248054 DUX3Q96PT4 197 aa12.65□□□□□ -0.38
SIN3B-201ENST00000248054 CEP350Q5VT06 3117 aa12.65□□□□□ -0.38
SIN3B-201ENST00000248054 IGHV3OR16-12A0A075B7B8 117 aa12.65□□□□□ -0.39
SIN3B-201ENST00000248054 NPIPB5A8MRT5 1133 aa12.65□□□□□ -0.39
SIN3B-201ENST00000248054 PF4P02776 101 aa12.65□□□□□ -0.39
SIN3B-201ENST00000248054 TMEM219Q86XT9 240 aa12.65□□□□□ -0.39
SIN3B-201ENST00000248054 IGHV3OR16-8A0A075B7F1 116 aa12.64□□□□□ -0.39
SIN3B-201ENST00000248054 PKDREJQ9NTG1 2253 aa12.64□□□□□ -0.39
SIN3B-201ENST00000248054 HAPLN4Q86UW8 402 aa12.64□□□□□ -0.39
SIN3B-201ENST00000248054 TMEM249Q2WGJ8 235 aa12.64□□□□□ -0.39
SIN3B-201ENST00000248054 BEX4Q9NWD9 120 aaPredicted RBP12.64□□□□□ -0.39
SIN3B-201ENST00000248054 PSMB11A5LHX3 300 aa12.64□□□□□ -0.39
SIN3B-201ENST00000248054 PSG3Q16557 428 aa12.64□□□□□ -0.39
SIN3B-201ENST00000248054 BRD3OSQ6XYD6 125 aa12.64□□□□□ -0.39
SIN3B-201ENST00000248054 CTSZQ9UBR2 303 aa12.64□□□□□ -0.39
SIN3B-201ENST00000248054 CACNA1GO43497 2377 aa12.63□□□□□ -0.39
SIN3B-201ENST00000248054 RCHY1Q96PM5 261 aa12.63□□□□□ -0.39
SIN3B-201ENST00000248054 SAP30O75446 220 aa12.63□□□□□ -0.39
SIN3B-201ENST00000248054 APOMO95445 188 aa12.63□□□□□ -0.39
SIN3B-201ENST00000248054 VWC2Q2TAL6 325 aa12.63□□□□□ -0.39
SIN3B-201ENST00000248054 CR1LQ2VPA4 569 aa12.63□□□□□ -0.39
SIN3B-201ENST00000248054 C10orf126Q8N4M7 172 aa12.63□□□□□ -0.39
SIN3B-201ENST00000248054 MCRIP2Q9BUT9 160 aaKnown RBP12.63□□□□□ -0.39
SIN3B-201ENST00000248054 ZFHX2Q9C0A1 2572 aaPredicted RBP12.63□□□□□ -0.39
SIN3B-201ENST00000248054 SYS1-DBNDD2H3BUS1 97 aa12.63□□□□□ -0.39
SIN3B-201ENST00000248054 PLNP26678 52 aa12.63□□□□□ -0.39
SIN3B-201ENST00000248054 ZNF329Q86UD4 541 aa12.62□□□□□ -0.39
SIN3B-201ENST00000248054 Q8NA96 180 aa12.62□□□□□ -0.39
SIN3B-201ENST00000248054 ZNF479Q96JC4 524 aa12.62□□□□□ -0.39
SIN3B-201ENST00000248054 LHFPL4Q7Z7J7 247 aa12.62□□□□□ -0.39
SIN3B-201ENST00000248054 OR11H6Q8NGC7 330 aa12.62□□□□□ -0.39
SIN3B-201ENST00000248054 TSPAN13O95857 204 aa12.62□□□□□ -0.39
SIN3B-201ENST00000248054 CMC4P56277 68 aaPredicted RBP12.62□□□□□ -0.39
SIN3B-201ENST00000248054 KLF17Q5JT82 389 aaPredicted RBP12.62□□□□□ -0.39
SIN3B-201ENST00000248054 THAP8Q8NA92 274 aa12.62□□□□□ -0.39
SIN3B-201ENST00000248054 CD7P09564 240 aa12.62□□□□□ -0.39
SIN3B-201ENST00000248054 CNTFRP26992 372 aa12.61□□□□□ -0.39
SIN3B-201ENST00000248054 SAMD5Q5TGI4 173 aa12.61□□□□□ -0.39
SIN3B-201ENST00000248054 RNF182Q8N6D2 247 aa12.61□□□□□ -0.39
SIN3B-201ENST00000248054 ZGRF1Q86YA3 2104 aa12.61□□□□□ -0.39
SIN3B-201ENST00000248054 ZNF138P52744 262 aa12.61□□□□□ -0.39
SIN3B-201ENST00000248054 BVES-AS1Q5T3Y7 98 aa12.61□□□□□ -0.39
SIN3B-201ENST00000248054 INTS1Q8N201 2190 aaKnown RBP12.61□□□□□ -0.39
SIN3B-201ENST00000248054 MUC6Q6W4X9 2439 aa12.61□□□□□ -0.39
SIN3B-201ENST00000248054 RBMY1BA6NDE4 496 aaKnown RBP12.61□□□□□ -0.39
SIN3B-201ENST00000248054 RBMY1EA6NEQ0 496 aaKnown RBP12.61□□□□□ -0.39
SIN3B-201ENST00000248054 D6R8Y8 96 aa12.61□□□□□ -0.39
SIN3B-201ENST00000248054 IGKV3-20P01619 116 aa12.61□□□□□ -0.39
SIN3B-201ENST00000248054 RBMY1DP0C7P1 496 aaKnown RBP12.61□□□□□ -0.39
SIN3B-201ENST00000248054 RBMY1A1P0DJD3 496 aaKnown RBP12.61□□□□□ -0.39
SIN3B-201ENST00000248054 RBMY1CP0DJD4 496 aa12.61□□□□□ -0.39
SIN3B-201ENST00000248054 ADORA2A-AS1P86434 159 aa12.61□□□□□ -0.39
SIN3B-201ENST00000248054 WT1-ASQ06250 92 aa12.61□□□□□ -0.39
SIN3B-201ENST00000248054 LINC00477Q96M19 166 aa12.61□□□□□ -0.39
SIN3B-201ENST00000248054 DAZAP2Q15038 168 aaPredicted RBP12.6□□□□□ -0.39
SIN3B-201ENST00000248054 MLANAQ16655 118 aa12.6□□□□□ -0.39
SIN3B-201ENST00000248054 ZNF815PA8K554 130 aa12.6□□□□□ -0.39
SIN3B-201ENST00000248054 LYZL1Q6UWQ5 148 aa12.6□□□□□ -0.39
SIN3B-201ENST00000248054 FAM231DQ6ZW35 169 aa12.6□□□□□ -0.39
SIN3B-201ENST00000248054 C18orf32Q8TCD1 76 aa12.6□□□□□ -0.39
SIN3B-201ENST00000248054 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.6□□□□□ -0.39
SIN3B-201ENST00000248054 KIR3DS1Q14943 382 aa12.6□□□□□ -0.39
SIN3B-201ENST00000248054 CADP27708 2225 aa12.59□□□□□ -0.39
SIN3B-201ENST00000248054 Q86TA4 180 aa12.59□□□□□ -0.39
SIN3B-201ENST00000248054 AZU1P20160 251 aa12.59□□□□□ -0.39
SIN3B-201ENST00000248054 TMEM14CQ9P0S9 112 aa12.59□□□□□ -0.39
SIN3B-201ENST00000248054 NCOA6Q14686 2063 aaPredicted RBP12.59□□□□□ -0.39
SIN3B-201ENST00000248054 MED13Q9UHV7 2174 aa12.59□□□□□ -0.39
SIN3B-201ENST00000248054 C22orf46C9J442 243 aa12.59□□□□□ -0.39
SIN3B-201ENST00000248054 EXOC3-AS1Q8N2X6 119 aa12.59□□□□□ -0.39
SIN3B-201ENST00000248054 ATP6V0BQ99437 205 aa12.59□□□□□ -0.39
SIN3B-201ENST00000248054 LINC01587Q99440 93 aa12.59□□□□□ -0.39
SIN3B-201ENST00000248054 YLPM1P49750 1951 aaKnown RBP12.59□□□□□ -0.39
SIN3B-201ENST00000248054 GRNP28799 593 aaKnown RBP12.59□□□□□ -0.39
SIN3B-201ENST00000248054 SPRNQ5BIV9 151 aa12.59□□□□□ -0.39
SIN3B-201ENST00000248054 LINC00527Q9UJ94 153 aa12.59□□□□□ -0.39
SIN3B-201ENST00000248054 SRRM4A7MD48 611 aaKnown RBP12.58□□□□□ -0.4
SIN3B-201ENST00000248054 A8MWV9 139 aa12.58□□□□□ -0.4
SIN3B-201ENST00000248054 COL5A1P20908 1838 aaPredicted RBP12.58□□□□□ -0.4
SIN3B-201ENST00000248054 GAGE13Q4V321 117 aa12.58□□□□□ -0.4
SIN3B-201ENST00000248054 OR13C6PQ8NH95 151 aa12.58□□□□□ -0.4
SIN3B-201ENST00000248054 ATP6V0E1O15342 81 aa12.58□□□□□ -0.4
SIN3B-201ENST00000248054 TMEM75Q8N9X5 138 aa12.58□□□□□ -0.4
SIN3B-201ENST00000248054 PLEKHB2Q96CS7 222 aa12.58□□□□□ -0.4
SIN3B-201ENST00000248054 SH2D1AO60880 128 aa12.57□□□□□ -0.4
SIN3B-201ENST00000248054 DPH3P1Q9H4G8 78 aa12.57□□□□□ -0.4
SIN3B-201ENST00000248054 SHANK1Q9Y566 2161 aa12.57□□□□□ -0.4
SIN3B-201ENST00000248054 PRR20EP86478 221 aa12.57□□□□□ -0.4
SIN3B-201ENST00000248054 PRR20CP86479 221 aa12.57□□□□□ -0.4
SIN3B-201ENST00000248054 PRR20DP86480 221 aa12.57□□□□□ -0.4
SIN3B-201ENST00000248054 PRR20BP86481 221 aa12.57□□□□□ -0.4
SIN3B-201ENST00000248054 PRR20AP86496 221 aa12.57□□□□□ -0.4
SIN3B-201ENST00000248054 DTX2Q86UW9 622 aa12.56□□□□□ -0.4
SIN3B-201ENST00000248054 ANAPC13Q9BS18 74 aa12.56□□□□□ -0.4
SIN3B-201ENST00000248054 TSSC4Q9Y5U2 329 aaPredicted RBP12.56□□□□□ -0.4
SIN3B-201ENST00000248054 CACNA1BQ00975 2339 aa12.56□□□□□ -0.4
SIN3B-201ENST00000248054 DEFB125Q8N687 156 aa12.56□□□□□ -0.4
SIN3B-201ENST00000248054 SPTBN1Q01082 2364 aaKnown RBP12.56□□□□□ -0.4
SIN3B-201ENST00000248054 IGKV2-40A0A087WW87 121 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms