RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 LINC01619G3V211 115 aa10.81□□□□□ -0.68
SDF2-201ENST00000247020 M0R3E3 92 aa10.81□□□□□ -0.68
SDF2-201ENST00000247020 PFN1P07737 140 aaKnown RBP10.81□□□□□ -0.68
SDF2-201ENST00000247020 HOXD3P31249 432 aaPredicted RBP10.81□□□□□ -0.68
SDF2-201ENST00000247020 ERVFC1-1P60608 527 aa10.81□□□□□ -0.68
SDF2-201ENST00000247020 FOXL1Q12952 345 aa10.81□□□□□ -0.68
SDF2-201ENST00000247020 TM4SF20Q53R12 229 aa10.81□□□□□ -0.68
SDF2-201ENST00000247020 IBA57Q5T440 356 aaKnown RBP10.81□□□□□ -0.68
SDF2-201ENST00000247020 TMEM183AQ8IXX5 376 aa10.81□□□□□ -0.68
SDF2-201ENST00000247020 TRAV9-1A0A075B6T8 112 aa10.8□□□□□ -0.68
SDF2-201ENST00000247020 IGHV3-49A0A0A0MS15 119 aa10.8□□□□□ -0.68
SDF2-201ENST00000247020 TMEM213A2RRL7 107 aa10.8□□□□□ -0.68
SDF2-201ENST00000247020 TCF21O43680 179 aa10.8□□□□□ -0.68
SDF2-201ENST00000247020 MGST1P10620 155 aaKnown RBP10.8□□□□□ -0.68
SDF2-201ENST00000247020 KLF5Q13887 457 aaPredicted RBP10.8□□□□□ -0.68
SDF2-201ENST00000247020 PYGO2Q9BRQ0 406 aa10.8□□□□□ -0.68
SDF2-201ENST00000247020 NRN1Q9NPD7 142 aa10.8□□□□□ -0.68
SDF2-201ENST00000247020 ZNF492Q9P255 531 aa10.8□□□□□ -0.68
SDF2-201ENST00000247020 PSG8Q9UQ74 426 aa10.8□□□□□ -0.68
SDF2-201ENST00000247020 RAB5AP20339 215 aa10.79□□□□□ -0.68
SDF2-201ENST00000247020 OR5I1Q13606 314 aa10.79□□□□□ -0.68
SDF2-201ENST00000247020 LCN12Q6JVE5 192 aa10.79□□□□□ -0.68
SDF2-201ENST00000247020 COX8CQ7Z4L0 72 aa10.79□□□□□ -0.68
SDF2-201ENST00000247020 URGCP-MRPS24S4R325 110 aa10.79□□□□□ -0.68
SDF2-201ENST00000247020 V9GYV3 84 aa10.79□□□□□ -0.68
SDF2-201ENST00000247020 TRAV8-2A0A0B4J237 113 aa10.78□□□□□ -0.68
SDF2-201ENST00000247020 SOCS3O14543 225 aa10.78□□□□□ -0.68
SDF2-201ENST00000247020 CRLF1O75462 422 aa10.78□□□□□ -0.68
SDF2-201ENST00000247020 DPF1Q92782 380 aa10.78□□□□□ -0.68
SDF2-201ENST00000247020 C16orf92Q96LL3 132 aa10.78□□□□□ -0.68
SDF2-201ENST00000247020 IL36BQ9NZH7 164 aa10.78□□□□□ -0.68
SDF2-201ENST00000247020 MLXQ9UH92 298 aa10.78□□□□□ -0.68
SDF2-201ENST00000247020 TRAV8-1A0A0A6YYK1 113 aa10.77□□□□□ -0.68
SDF2-201ENST00000247020 SYNJ2BPP57105 145 aa10.77□□□□□ -0.68
SDF2-201ENST00000247020 SAPCD1Q5SSQ6 148 aa10.77□□□□□ -0.68
SDF2-201ENST00000247020 PRNTQ86SH4 94 aa10.77□□□□□ -0.68
SDF2-201ENST00000247020 KLHL30-AS1Q8NEE0 82 aa10.77□□□□□ -0.68
SDF2-201ENST00000247020 OR11H1Q8NG94 326 aa10.77□□□□□ -0.68
SDF2-201ENST00000247020 OR1N2Q8NGR9 330 aa10.77□□□□□ -0.68
SDF2-201ENST00000247020 PEMTQ9UBM1 199 aa10.77□□□□□ -0.68
SDF2-201ENST00000247020 TMA7Q9Y2S6 64 aaKnown RBP10.77□□□□□ -0.68
SDF2-201ENST00000247020 TSSC4Q9Y5U2 329 aaPredicted RBP10.77□□□□□ -0.68
SDF2-201ENST00000247020 M0QZ24 198 aa10.77□□□□□ -0.69
SDF2-201ENST00000247020 CXCL1P09341 107 aa10.77□□□□□ -0.69
SDF2-201ENST00000247020 CT83Q5H943 113 aa10.77□□□□□ -0.69
SDF2-201ENST00000247020 KHDC1LQ5JSQ8 128 aa10.77□□□□□ -0.69
SDF2-201ENST00000247020 TCF24Q7RTU0 167 aa10.77□□□□□ -0.69
SDF2-201ENST00000247020 NHLRC2Q8NBF2 726 aa10.77□□□□□ -0.69
SDF2-201ENST00000247020 RNASE7Q9H1E1 156 aaKnown RBP10.77□□□□□ -0.69
SDF2-201ENST00000247020 PPP1R14DQ9NXH3 145 aa10.77□□□□□ -0.69
SDF2-201ENST00000247020 RNF114Q9Y508 228 aa10.77□□□□□ -0.69
SDF2-201ENST00000247020 TGIF2-C20orf24A0A0A6YYL0 155 aa10.76□□□□□ -0.69
SDF2-201ENST00000247020 A0A1B0GUS0 222 aa10.76□□□□□ -0.69
SDF2-201ENST00000247020 C19orf71A6NCJ1 209 aa10.76□□□□□ -0.69
SDF2-201ENST00000247020 C2orf70A6NJV1 201 aa10.76□□□□□ -0.69
SDF2-201ENST00000247020 GATCO43716 136 aaKnown RBP10.76□□□□□ -0.69
SDF2-201ENST00000247020 RPL19P84098 196 aaKnown RBP10.76□□□□□ -0.69
SDF2-201ENST00000247020 OR4B1Q8NGF8 309 aa10.76□□□□□ -0.69
SDF2-201ENST00000247020 FAM210BQ96KR6 192 aa10.76□□□□□ -0.69
SDF2-201ENST00000247020 SGK494Q96LW2 274 aa10.76□□□□□ -0.69
SDF2-201ENST00000247020 NOTCH2Q04721 2471 aa10.75□□□□□ -0.69
SDF2-201ENST00000247020 ZNF705GA8MUZ8 300 aaPredicted RBP10.75□□□□□ -0.69
SDF2-201ENST00000247020 TYMSP04818 313 aa10.75□□□□□ -0.69
SDF2-201ENST00000247020 CBLN1P23435 193 aa10.75□□□□□ -0.69
SDF2-201ENST00000247020 HLA-DMBP28068 263 aa10.75□□□□□ -0.69
SDF2-201ENST00000247020 ID1P41134 155 aa10.75□□□□□ -0.69
SDF2-201ENST00000247020 PROK1P58294 105 aa10.75□□□□□ -0.69
SDF2-201ENST00000247020 FHL3Q13643 280 aa10.75□□□□□ -0.69
SDF2-201ENST00000247020 C18orf65Q6ZTR6 163 aa10.75□□□□□ -0.69
SDF2-201ENST00000247020 Q71RC1 249 aaPredicted RBP10.75□□□□□ -0.69
SDF2-201ENST00000247020 GBGT1Q8N5D6 347 aa10.75□□□□□ -0.69
SDF2-201ENST00000247020 NUDT10Q8NFP7 164 aa10.75□□□□□ -0.69
SDF2-201ENST00000247020 NUDT11Q96G61 164 aa10.75□□□□□ -0.69
SDF2-201ENST00000247020 NDFIP1Q9BT67 221 aa10.75□□□□□ -0.69
SDF2-201ENST00000247020 IGKV2-40A0A087WW87 121 aaPredicted RBP10.74□□□□□ -0.69
SDF2-201ENST00000247020 A0A1W2PPQ1 181 aa10.74□□□□□ -0.69
SDF2-201ENST00000247020 NPIPB6E9PJ23 425 aa10.74□□□□□ -0.69
SDF2-201ENST00000247020 OVOL1O14753 267 aa10.74□□□□□ -0.69
SDF2-201ENST00000247020 IGKV2D-40P01614 121 aaPredicted RBP10.74□□□□□ -0.69
SDF2-201ENST00000247020 CD28P10747 220 aa10.74□□□□□ -0.69
SDF2-201ENST00000247020 SLURP1P55000 103 aa10.74□□□□□ -0.69
SDF2-201ENST00000247020 IGFL4Q6B9Z1 124 aa10.74□□□□□ -0.69
SDF2-201ENST00000247020 PRR27Q6MZM9 219 aa10.74□□□□□ -0.69
SDF2-201ENST00000247020 C9orf47Q6ZRZ4 202 aa10.74□□□□□ -0.69
SDF2-201ENST00000247020 RNF182Q8N6D2 247 aa10.74□□□□□ -0.69
SDF2-201ENST00000247020 DAZAP1Q96EP5 407 aaKnown RBP10.74□□□□□ -0.69
SDF2-201ENST00000247020 PRR25Q96S07 402 aa10.74□□□□□ -0.69
SDF2-201ENST00000247020 SRD5A3Q9H8P0 318 aa10.74□□□□□ -0.69
SDF2-201ENST00000247020 LENEPQ9Y5L5 61 aa10.74□□□□□ -0.69
SDF2-201ENST00000247020 SMIM27A0A1W2PRY6 76 aa10.73□□□□□ -0.69
SDF2-201ENST00000247020 ZNF705FA8MVS1 300 aaPredicted RBP10.73□□□□□ -0.69
SDF2-201ENST00000247020 C1orf196B1AJZ1 125 aa10.73□□□□□ -0.69
SDF2-201ENST00000247020 P01737 135 aa10.73□□□□□ -0.69
SDF2-201ENST00000247020 CT45A10P0DMU9 189 aa10.73□□□□□ -0.69
SDF2-201ENST00000247020 RPL11P62913 178 aaKnown RBP10.73□□□□□ -0.69
SDF2-201ENST00000247020 DEFB136Q30KP8 78 aa10.73□□□□□ -0.69
SDF2-201ENST00000247020 OR9G4Q8NGQ1 327 aa10.73□□□□□ -0.69
SDF2-201ENST00000247020 DCANP1Q8TF63 244 aa10.73□□□□□ -0.69
SDF2-201ENST00000247020 FAM231BA6NCW3 169 aa10.73□□□□□ -0.69
SDF2-201ENST00000247020 RPS10P46783 165 aaKnown RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 140.3 ms