RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 WIPF2Q8TF74 440 aaPredicted RBP13.15□□□□□ -0.3
CDKN1A-201ENST00000244741 TSKUQ8WUA8 353 aa13.15□□□□□ -0.3
CDKN1A-201ENST00000244741 NEU1Q99519 415 aa13.15□□□□□ -0.3
CDKN1A-201ENST00000244741 MRPL27Q9P0M9 148 aaKnown RBP13.15□□□□□ -0.3
CDKN1A-201ENST00000244741 ZMAT5Q9UDW3 170 aaKnown RBP13.15□□□□□ -0.3
CDKN1A-201ENST00000244741 ATRQ13535 2644 aa13.14□□□□□ -0.31
CDKN1A-201ENST00000244741 ZNF253O75346 499 aa13.14□□□□□ -0.31
CDKN1A-201ENST00000244741 GPX1P07203 203 aa13.14□□□□□ -0.31
CDKN1A-201ENST00000244741 C1orf194Q5T5A4 169 aa13.14□□□□□ -0.31
CDKN1A-201ENST00000244741 CHRDL1Q9BU40 450 aa13.14□□□□□ -0.31
CDKN1A-201ENST00000244741 RNF114Q9Y508 228 aa13.14□□□□□ -0.31
CDKN1A-201ENST00000244741 TRAV41A0A0B4J266 112 aa13.14□□□□□ -0.31
CDKN1A-201ENST00000244741 HIGD1CA8MV81 97 aa13.14□□□□□ -0.31
CDKN1A-201ENST00000244741 LTAP01374 205 aa13.14□□□□□ -0.31
CDKN1A-201ENST00000244741 Q6ZSV7 163 aa13.14□□□□□ -0.31
CDKN1A-201ENST00000244741 SMIM12Q96EX1 92 aa13.14□□□□□ -0.31
CDKN1A-201ENST00000244741 FMC1Q96HJ9 113 aa13.14□□□□□ -0.31
CDKN1A-201ENST00000244741 TMEM68Q96MH6 324 aa13.14□□□□□ -0.31
CDKN1A-201ENST00000244741 TMEM14CQ9P0S9 112 aa13.14□□□□□ -0.31
CDKN1A-201ENST00000244741 A0A1W2PS18 150 aa13.13□□□□□ -0.31
CDKN1A-201ENST00000244741 HIST2H2BDQ6DRA6 164 aa13.13□□□□□ -0.31
CDKN1A-201ENST00000244741 RASL11AQ6T310 242 aa13.13□□□□□ -0.31
CDKN1A-201ENST00000244741 LCNL1Q6ZST4 164 aa13.13□□□□□ -0.31
CDKN1A-201ENST00000244741 TDRG1Q3Y452 100 aa13.13□□□□□ -0.31
CDKN1A-201ENST00000244741 TOMM20LQ6UXN7 152 aa13.13□□□□□ -0.31
CDKN1A-201ENST00000244741 EXOC3-AS1Q8N2X6 119 aa13.13□□□□□ -0.31
CDKN1A-201ENST00000244741 OTORQ9NRC9 128 aa13.13□□□□□ -0.31
CDKN1A-201ENST00000244741 S4R3C0 116 aa13.13□□□□□ -0.31
CDKN1A-201ENST00000244741 JMJD8Q96S16 334 aa13.12□□□□□ -0.31
CDKN1A-201ENST00000244741 FBXL7Q9UJT9 491 aa13.12□□□□□ -0.31
CDKN1A-201ENST00000244741 TRAV8-1A0A0A6YYK1 113 aa13.11□□□□□ -0.31
CDKN1A-201ENST00000244741 KIR2DL5BA0A0G2JN68 375 aa13.11□□□□□ -0.31
CDKN1A-201ENST00000244741 KIR2DL5BA0A0G2JPC4 375 aa13.11□□□□□ -0.31
CDKN1A-201ENST00000244741 IGF1P05019 195 aa13.11□□□□□ -0.31
CDKN1A-201ENST00000244741 TCF24Q7RTU0 167 aa13.11□□□□□ -0.31
CDKN1A-201ENST00000244741 KIR2DL5AQ8N109 375 aa13.11□□□□□ -0.31
CDKN1A-201ENST00000244741 KCNS1Q96KK3 526 aa13.11□□□□□ -0.31
CDKN1A-201ENST00000244741 RPP21Q9H633 154 aaKnown RBP13.11□□□□□ -0.31
CDKN1A-201ENST00000244741 C19orf71A6NCJ1 209 aa13.11□□□□□ -0.31
CDKN1A-201ENST00000244741 TTC9CQ8N5M4 171 aa13.11□□□□□ -0.31
CDKN1A-201ENST00000244741 SHANK2-AS3Q9BTD1 123 aa13.11□□□□□ -0.31
CDKN1A-201ENST00000244741 A0A1B0GV90 55 aa13.1□□□□□ -0.31
CDKN1A-201ENST00000244741 PMCHP20382 165 aa13.1□□□□□ -0.31
CDKN1A-201ENST00000244741 AMTP48728 403 aa13.1□□□□□ -0.31
CDKN1A-201ENST00000244741 CAMPP49913 170 aa13.1□□□□□ -0.31
CDKN1A-201ENST00000244741 TEX43Q6ZNM6 134 aa13.1□□□□□ -0.31
CDKN1A-201ENST00000244741 ZNF491Q8N8L2 437 aa13.1□□□□□ -0.31
CDKN1A-201ENST00000244741 C18orf32Q8TCD1 76 aa13.1□□□□□ -0.31
CDKN1A-201ENST00000244741 VN1R17PQ8TDU5 208 aa13.1□□□□□ -0.31
CDKN1A-201ENST00000244741 C17orf77Q96MU5 243 aa13.1□□□□□ -0.31
CDKN1A-201ENST00000244741 SSBP4Q9BWG4 385 aaPredicted RBP13.1□□□□□ -0.31
CDKN1A-201ENST00000244741 LINC00469Q8N7U9 141 aa13.1□□□□□ -0.31
CDKN1A-201ENST00000244741 NRN1Q9NPD7 142 aa13.1□□□□□ -0.31
CDKN1A-201ENST00000244741 ZNF492Q9P255 531 aa13.1□□□□□ -0.31
CDKN1A-201ENST00000244741 A0A1B0GXF2 115 aa13.09□□□□□ -0.31
CDKN1A-201ENST00000244741 NPIPB5A8MRT5 1133 aa13.09□□□□□ -0.31
CDKN1A-201ENST00000244741 H3BRN7 92 aa13.09□□□□□ -0.31
CDKN1A-201ENST00000244741 OR2J3O76001 311 aa13.09□□□□□ -0.31
CDKN1A-201ENST00000244741 IGLV2-11P01706 119 aa13.09□□□□□ -0.31
CDKN1A-201ENST00000244741 P01737 135 aa13.09□□□□□ -0.31
CDKN1A-201ENST00000244741 C19orf54Q5BKX5 351 aa13.09□□□□□ -0.31
CDKN1A-201ENST00000244741 PRR31Q5SQ13 230 aa13.09□□□□□ -0.31
CDKN1A-201ENST00000244741 GOLT1AQ6ZVE7 132 aa13.09□□□□□ -0.31
CDKN1A-201ENST00000244741 Q86TA4 180 aa13.09□□□□□ -0.31
CDKN1A-201ENST00000244741 GTSF1Q8WW33 167 aa13.09□□□□□ -0.31
CDKN1A-201ENST00000244741 FANCD2OSQ96PS1 177 aa13.09□□□□□ -0.31
CDKN1A-201ENST00000244741 KLK15Q9H2R5 256 aa13.09□□□□□ -0.31
CDKN1A-201ENST00000244741 ZNF324O75467 553 aaPredicted RBP13.08□□□□□ -0.31
CDKN1A-201ENST00000244741 IGHV3-23P01764 117 aa13.08□□□□□ -0.31
CDKN1A-201ENST00000244741 KRTDAPP60985 99 aa13.08□□□□□ -0.31
CDKN1A-201ENST00000244741 FAM110DQ8TAY7 271 aaPredicted RBP13.08□□□□□ -0.31
CDKN1A-201ENST00000244741 TRBV19A0A075B6N1 114 aa13.08□□□□□ -0.32
CDKN1A-201ENST00000244741 A8MWL6 223 aa13.08□□□□□ -0.32
CDKN1A-201ENST00000244741 IL4P05112 153 aa13.08□□□□□ -0.32
CDKN1A-201ENST00000244741 PPIFP30405 207 aaKnown RBP13.08□□□□□ -0.32
CDKN1A-201ENST00000244741 ATP5L2Q7Z4Y8 100 aa13.08□□□□□ -0.32
CDKN1A-201ENST00000244741 PRNTQ86SH4 94 aa13.08□□□□□ -0.32
CDKN1A-201ENST00000244741 BPIFA4PQ86YQ2 179 aa13.08□□□□□ -0.32
CDKN1A-201ENST00000244741 Q8N2B8 174 aa13.08□□□□□ -0.32
CDKN1A-201ENST00000244741 FAM19A2Q8N3H0 131 aa13.08□□□□□ -0.32
CDKN1A-201ENST00000244741 Q8N976 141 aa13.08□□□□□ -0.32
CDKN1A-201ENST00000244741 RNF125Q96EQ8 232 aa13.08□□□□□ -0.32
CDKN1A-201ENST00000244741 C2orf88Q9BSF0 95 aa13.08□□□□□ -0.32
CDKN1A-201ENST00000244741 IGLV11-55A0A075B6I3 123 aa13.07□□□□□ -0.32
CDKN1A-201ENST00000244741 HAX1O00165 279 aa13.07□□□□□ -0.32
CDKN1A-201ENST00000244741 IGLC2P0DOY2 106 aa13.07□□□□□ -0.32
CDKN1A-201ENST00000244741 PRB4P10163 310 aaPredicted RBP13.07□□□□□ -0.32
CDKN1A-201ENST00000244741 PF4V1P10720 104 aa13.07□□□□□ -0.32
CDKN1A-201ENST00000244741 CT83Q5H943 113 aa13.07□□□□□ -0.32
CDKN1A-201ENST00000244741 NIT1Q86X76 327 aa13.07□□□□□ -0.32
CDKN1A-201ENST00000244741 DAZAP1Q96EP5 407 aaKnown RBP13.07□□□□□ -0.32
CDKN1A-201ENST00000244741 FBN1P35555 2871 aaKnown RBP13.07□□□□□ -0.32
CDKN1A-201ENST00000244741 WI2-2373I1.2A0A1W2PRP0 233 aa13.07□□□□□ -0.32
CDKN1A-201ENST00000244741 NDUFB8O95169 186 aa13.07□□□□□ -0.32
CDKN1A-201ENST00000244741 FCGR2BP31994 310 aaPredicted RBP13.07□□□□□ -0.32
CDKN1A-201ENST00000244741 CRIP2P52943 208 aaPredicted RBP13.07□□□□□ -0.32
CDKN1A-201ENST00000244741 PGLYRP4Q96LB8 373 aa13.07□□□□□ -0.32
CDKN1A-201ENST00000244741 ALKBH7Q9BT30 221 aaPredicted RBP13.07□□□□□ -0.32
CDKN1A-201ENST00000244741 TENM1Q9UKZ4 2725 aa13.06□□□□□ -0.32
CDKN1A-201ENST00000244741 EREGO14944 169 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms