RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 OR2T8A6NH00 312 aa11.24□□□□□ -0.61
HIF3A-202ENST00000244303 CCDC144NLQ6NUI1 221 aa11.24□□□□□ -0.61
HIF3A-202ENST00000244303 Q8N6K4 173 aa11.24□□□□□ -0.61
HIF3A-202ENST00000244303 GATD1Q8NB37 220 aa11.24□□□□□ -0.61
HIF3A-202ENST00000244303 TIMM8BQ9Y5J9 83 aaPredicted RBP11.24□□□□□ -0.61
HIF3A-202ENST00000244303 NUDT3O95989 172 aa11.24□□□□□ -0.61
HIF3A-202ENST00000244303 CT45A10P0DMU9 189 aa11.24□□□□□ -0.61
HIF3A-202ENST00000244303 SLC25A34Q6PIV7 304 aa11.24□□□□□ -0.61
HIF3A-202ENST00000244303 TMEM191AQ9H0A3 160 aa11.24□□□□□ -0.61
HIF3A-202ENST00000244303 ZFP36P26651 326 aaKnown RBP11.23□□□□□ -0.61
HIF3A-202ENST00000244303 THYN1Q9P016 225 aa11.23□□□□□ -0.61
HIF3A-202ENST00000244303 IGKV2-40A0A087WW87 121 aaPredicted RBP11.23□□□□□ -0.61
HIF3A-202ENST00000244303 TMSB15BA0A087X1C1 80 aa11.23□□□□□ -0.61
HIF3A-202ENST00000244303 IGKV2D-40P01614 121 aaPredicted RBP11.23□□□□□ -0.61
HIF3A-202ENST00000244303 OR5AL1P0C617 328 aa11.23□□□□□ -0.61
HIF3A-202ENST00000244303 TMEM11P17152 192 aa11.23□□□□□ -0.61
HIF3A-202ENST00000244303 CDKN1BP46527 198 aa11.23□□□□□ -0.61
HIF3A-202ENST00000244303 CSN1S1P47710 185 aa11.23□□□□□ -0.61
HIF3A-202ENST00000244303 Q6AWC8 147 aa11.23□□□□□ -0.61
HIF3A-202ENST00000244303 C1orf122Q6ZSJ8 110 aa11.23□□□□□ -0.61
HIF3A-202ENST00000244303 MAP1LC3CQ9BXW4 147 aa11.23□□□□□ -0.61
HIF3A-202ENST00000244303 A0A1B0GW15 77 aa11.22□□□□□ -0.61
HIF3A-202ENST00000244303 NDUFS7O75251 213 aa11.22□□□□□ -0.61
HIF3A-202ENST00000244303 EGR2P11161 476 aaPredicted RBP11.22□□□□□ -0.61
HIF3A-202ENST00000244303 PSG9Q00887 426 aa11.22□□□□□ -0.61
HIF3A-202ENST00000244303 EBI3Q14213 229 aa11.22□□□□□ -0.61
HIF3A-202ENST00000244303 SAPCD1Q5SSQ6 148 aa11.22□□□□□ -0.61
HIF3A-202ENST00000244303 MCRIP2Q9BUT9 160 aaKnown RBP11.22□□□□□ -0.61
HIF3A-202ENST00000244303 IGHV7-81A0A0B4J1V7 117 aa11.21□□□□□ -0.61
HIF3A-202ENST00000244303 CBY3A6NI87 242 aa11.21□□□□□ -0.61
HIF3A-202ENST00000244303 SH2D1AO60880 128 aa11.21□□□□□ -0.61
HIF3A-202ENST00000244303 CTSGP08311 255 aa11.21□□□□□ -0.61
HIF3A-202ENST00000244303 UQCRFS1P47985 274 aa11.21□□□□□ -0.61
HIF3A-202ENST00000244303 ITLN2Q8WWU7 325 aaPredicted RBP11.21□□□□□ -0.61
HIF3A-202ENST00000244303 SERTM2A0A1B0GWG4 89 aa11.21□□□□□ -0.62
HIF3A-202ENST00000244303 TMEM189A5PLL7 270 aa11.21□□□□□ -0.62
HIF3A-202ENST00000244303 OOSP1A8MZH6 123 aa11.21□□□□□ -0.62
HIF3A-202ENST00000244303 RPL7P18124 248 aaKnown RBP11.21□□□□□ -0.62
HIF3A-202ENST00000244303 COTL1Q14019 142 aa11.21□□□□□ -0.62
HIF3A-202ENST00000244303 MINOS1Q5TGZ0 78 aa11.21□□□□□ -0.62
HIF3A-202ENST00000244303 LYZL1Q6UWQ5 148 aa11.21□□□□□ -0.62
HIF3A-202ENST00000244303 UBTD1Q9HAC8 227 aa11.21□□□□□ -0.62
HIF3A-202ENST00000244303 AP5S1Q9NUS5 200 aa11.21□□□□□ -0.62
HIF3A-202ENST00000244303 MINOS1-NBL1R4GNA1 71 aa11.21□□□□□ -0.62
HIF3A-202ENST00000244303 NCOR2Q9Y618 2525 aa11.2□□□□□ -0.62
HIF3A-202ENST00000244303 IGHV3OR16-8A0A075B7F1 116 aa11.2□□□□□ -0.62
HIF3A-202ENST00000244303 GNLYP22749 145 aa11.2□□□□□ -0.62
HIF3A-202ENST00000244303 IGFL4Q6B9Z1 124 aa11.2□□□□□ -0.62
HIF3A-202ENST00000244303 C12orf54Q6X4T0 127 aa11.2□□□□□ -0.62
HIF3A-202ENST00000244303 RABAC1Q9UI14 185 aa11.2□□□□□ -0.62
HIF3A-202ENST00000244303 HSPB8Q9UJY1 196 aa11.2□□□□□ -0.62
HIF3A-202ENST00000244303 SMAD5-AS1Q9Y6J3 95 aa11.2□□□□□ -0.62
HIF3A-202ENST00000244303 CHD8Q9HCK8 2581 aa11.2□□□□□ -0.62
HIF3A-202ENST00000244303 ZFHX3Q15911 3703 aa11.2□□□□□ -0.62
HIF3A-202ENST00000244303 HIVEP3Q5T1R4 2406 aa11.2□□□□□ -0.62
HIF3A-202ENST00000244303 MED13LQ71F56 2210 aa11.2□□□□□ -0.62
HIF3A-202ENST00000244303 IGHV3-35A0A0C4DH35 117 aa11.2□□□□□ -0.62
HIF3A-202ENST00000244303 MUC21A0A0G2JKD1 596 aa11.2□□□□□ -0.62
HIF3A-202ENST00000244303 MUC21A0A140T8X8 626 aa11.2□□□□□ -0.62
HIF3A-202ENST00000244303 TMEM213A2RRL7 107 aa11.2□□□□□ -0.62
HIF3A-202ENST00000244303 ANKRD39Q53RE8 183 aa11.2□□□□□ -0.62
HIF3A-202ENST00000244303 MUC21Q5SSG8 566 aa11.2□□□□□ -0.62
HIF3A-202ENST00000244303 BVES-AS1Q5T3Y7 98 aa11.2□□□□□ -0.62
HIF3A-202ENST00000244303 PET117Q6UWS5 81 aa11.2□□□□□ -0.62
HIF3A-202ENST00000244303 ZNF493Q6ZR52 646 aa11.2□□□□□ -0.62
HIF3A-202ENST00000244303 Q8N9W7 124 aa11.2□□□□□ -0.62
HIF3A-202ENST00000244303 TAX1BP3O14907 124 aa11.19□□□□□ -0.62
HIF3A-202ENST00000244303 PRSS3P2Q8NHM4 247 aa11.19□□□□□ -0.62
HIF3A-202ENST00000244303 Q8TAT8 98 aa11.19□□□□□ -0.62
HIF3A-202ENST00000244303 PRR25Q96S07 402 aa11.19□□□□□ -0.62
HIF3A-202ENST00000244303 SIRPDQ9H106 197 aa11.19□□□□□ -0.62
HIF3A-202ENST00000244303 SPTBN1Q01082 2364 aaKnown RBP11.19□□□□□ -0.62
HIF3A-202ENST00000244303 HLA-DMBP28068 263 aa11.19□□□□□ -0.62
HIF3A-202ENST00000244303 FA2HQ7L5A8 372 aa11.19□□□□□ -0.62
HIF3A-202ENST00000244303 PMCHL2Q9BQD1 86 aa11.19□□□□□ -0.62
HIF3A-202ENST00000244303 D6R8Y8 96 aa11.18□□□□□ -0.62
HIF3A-202ENST00000244303 C19orf84I3L1E1 186 aa11.18□□□□□ -0.62
HIF3A-202ENST00000244303 SCGB2A1O75556 95 aa11.18□□□□□ -0.62
HIF3A-202ENST00000244303 VGLL1Q99990 258 aa11.18□□□□□ -0.62
HIF3A-202ENST00000244303 IGHG4P01861 327 aa11.18□□□□□ -0.62
HIF3A-202ENST00000244303 FAM106CPP0CH98 169 aa11.18□□□□□ -0.62
HIF3A-202ENST00000244303 IFI27P40305 119 aaPredicted RBP11.18□□□□□ -0.62
HIF3A-202ENST00000244303 ZNF80P51504 273 aaPredicted RBP11.18□□□□□ -0.62
HIF3A-202ENST00000244303 FAM106AQ4KMX7 169 aa11.18□□□□□ -0.62
HIF3A-202ENST00000244303 AMMECR1LQ6DCA0 310 aa11.18□□□□□ -0.62
HIF3A-202ENST00000244303 COX8CQ7Z4L0 72 aa11.18□□□□□ -0.62
HIF3A-202ENST00000244303 AMN1Q8IY45 258 aa11.18□□□□□ -0.62
HIF3A-202ENST00000244303 ARL6IP6Q8N6S5 226 aa11.18□□□□□ -0.62
HIF3A-202ENST00000244303 SCRT2Q9NQ03 307 aa11.18□□□□□ -0.62
HIF3A-202ENST00000244303 LOC389332A0A1B0GUA5 103 aa11.17□□□□□ -0.62
HIF3A-202ENST00000244303 GPR183P32249 361 aa11.17□□□□□ -0.62
HIF3A-202ENST00000244303 EFNA4P52798 201 aa11.17□□□□□ -0.62
HIF3A-202ENST00000244303 FAM104BQ5XKR9 115 aa11.17□□□□□ -0.62
HIF3A-202ENST00000244303 DEFB125Q8N687 156 aa11.17□□□□□ -0.62
HIF3A-202ENST00000244303 VPS25Q9BRG1 176 aa11.17□□□□□ -0.62
HIF3A-202ENST00000244303 A0A087X0K7 114 aa11.16□□□□□ -0.62
HIF3A-202ENST00000244303 RHOGP84095 191 aa11.16□□□□□ -0.62
HIF3A-202ENST00000244303 ECSCRQ19T08 205 aa11.16□□□□□ -0.62
HIF3A-202ENST00000244303 C15orf32Q32M92 178 aa11.16□□□□□ -0.62
HIF3A-202ENST00000244303 LINC01545Q5VT33 79 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms