RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 NBL1P41271 181 aa11.22□□□□□ -0.61
TARDBP-201ENST00000240185 MRPL14Q6P1L8 145 aaKnown RBP11.22□□□□□ -0.61
TARDBP-201ENST00000240185 RHPN1-AS1Q9BWJ2 59 aa11.22□□□□□ -0.61
TARDBP-201ENST00000240185 F8VRH5 84 aa11.22□□□□□ -0.61
TARDBP-201ENST00000240185 SIVA1O15304 175 aa11.22□□□□□ -0.61
TARDBP-201ENST00000240185 DKK1O94907 266 aa11.21□□□□□ -0.61
TARDBP-201ENST00000240185 QRFPP83859 136 aa11.21□□□□□ -0.61
TARDBP-201ENST00000240185 MESP1Q9BRJ9 268 aa11.21□□□□□ -0.61
TARDBP-201ENST00000240185 V9GYV3 84 aa11.21□□□□□ -0.61
TARDBP-201ENST00000240185 MCM3APO60318 1980 aa11.21□□□□□ -0.61
TARDBP-201ENST00000240185 NSUN5P1Q3KNT7 163 aa11.21□□□□□ -0.61
TARDBP-201ENST00000240185 SDHAF1A6NFY7 115 aa11.21□□□□□ -0.62
TARDBP-201ENST00000240185 I3L3M4 83 aa11.21□□□□□ -0.62
TARDBP-201ENST00000240185 C8orf49Q96NF6 230 aa11.21□□□□□ -0.62
TARDBP-201ENST00000240185 SIGLEC8Q9NYZ4 499 aa11.21□□□□□ -0.62
TARDBP-201ENST00000240185 FANCMQ8IYD8 2048 aa11.21□□□□□ -0.62
TARDBP-201ENST00000240185 TEX48A0A1B0GUV7 120 aa11.21□□□□□ -0.62
TARDBP-201ENST00000240185 KLRD1Q13241 179 aa11.21□□□□□ -0.62
TARDBP-201ENST00000240185 IGLC7A0M8Q6 106 aa11.2□□□□□ -0.62
TARDBP-201ENST00000240185 NPYP01303 97 aa11.2□□□□□ -0.62
TARDBP-201ENST00000240185 PAPPA2Q9BXP8 1791 aa11.2□□□□□ -0.62
TARDBP-201ENST00000240185 ABCA4P78363 2273 aa11.2□□□□□ -0.62
TARDBP-201ENST00000240185 DOCK1Q14185 1865 aa11.2□□□□□ -0.62
TARDBP-201ENST00000240185 KIF13BQ9NQT8 1826 aa11.2□□□□□ -0.62
TARDBP-201ENST00000240185 ZNF581Q9P0T4 197 aa11.2□□□□□ -0.62
TARDBP-201ENST00000240185 GREB1LQ9C091 1923 aaPredicted RBP11.2□□□□□ -0.62
TARDBP-201ENST00000240185 TRAV13-2A0A0B4J235 113 aa11.2□□□□□ -0.62
TARDBP-201ENST00000240185 J3QQQ9 107 aa11.2□□□□□ -0.62
TARDBP-201ENST00000240185 ZNF561-AS1K7EIQ3 104 aa11.2□□□□□ -0.62
TARDBP-201ENST00000240185 PRB1P04280 392 aa11.2□□□□□ -0.62
TARDBP-201ENST00000240185 DEFB130BP0DP73 79 aa11.2□□□□□ -0.62
TARDBP-201ENST00000240185 DEFB130AP0DP74 79 aa11.2□□□□□ -0.62
TARDBP-201ENST00000240185 VMO1Q7Z5L0 202 aa11.2□□□□□ -0.62
TARDBP-201ENST00000240185 EGR2P11161 476 aaPredicted RBP11.2□□□□□ -0.62
TARDBP-201ENST00000240185 SH2D6Q7Z4S9 175 aa11.2□□□□□ -0.62
TARDBP-201ENST00000240185 MSRB2Q9Y3D2 182 aa11.2□□□□□ -0.62
TARDBP-201ENST00000240185 TRAV26-2A0A0B4J265 109 aa11.19□□□□□ -0.62
TARDBP-201ENST00000240185 C5orf63A6NC05 138 aa11.19□□□□□ -0.62
TARDBP-201ENST00000240185 WIPF3A6NGB9 483 aa11.19□□□□□ -0.62
TARDBP-201ENST00000240185 OOSP1A8MZH6 123 aa11.19□□□□□ -0.62
TARDBP-201ENST00000240185 RHODO00212 210 aa11.19□□□□□ -0.62
TARDBP-201ENST00000240185 TMEM243Q9BU79 118 aa11.19□□□□□ -0.62
TARDBP-201ENST00000240185 LTBP1Q14766 1721 aa11.19□□□□□ -0.62
TARDBP-201ENST00000240185 ROS1P08922 2347 aa11.19□□□□□ -0.62
TARDBP-201ENST00000240185 IGLV3-12A0A075B6K2 115 aa11.19□□□□□ -0.62
TARDBP-201ENST00000240185 NKAPP1Q8N9T2 125 aa11.19□□□□□ -0.62
TARDBP-201ENST00000240185 KLF5Q13887 457 aaPredicted RBP11.19□□□□□ -0.62
TARDBP-201ENST00000240185 C10orf91Q5T1B1 145 aa11.19□□□□□ -0.62
TARDBP-201ENST00000240185 SPTAN1Q13813 2472 aaKnown RBP11.18□□□□□ -0.62
TARDBP-201ENST00000240185 Q6ZS49 121 aa11.18□□□□□ -0.62
TARDBP-201ENST00000240185 SPACA3Q8IXA5 215 aa11.18□□□□□ -0.62
TARDBP-201ENST00000240185 SHISA9B4DS77 424 aa11.18□□□□□ -0.62
TARDBP-201ENST00000240185 CFC1BP0CG36 223 aa11.18□□□□□ -0.62
TARDBP-201ENST00000240185 CFC1P0CG37 223 aa11.18□□□□□ -0.62
TARDBP-201ENST00000240185 MINOS1Q5TGZ0 78 aa11.18□□□□□ -0.62
TARDBP-201ENST00000240185 FAM231DQ6ZW35 169 aa11.18□□□□□ -0.62
TARDBP-201ENST00000240185 MINOS1-NBL1R4GNA1 71 aa11.18□□□□□ -0.62
TARDBP-201ENST00000240185 SMIM27A0A1W2PRY6 76 aa11.18□□□□□ -0.62
TARDBP-201ENST00000240185 EFNA2O43921 213 aa11.18□□□□□ -0.62
TARDBP-201ENST00000240185 ZNF672Q499Z4 452 aaPredicted RBP11.18□□□□□ -0.62
TARDBP-201ENST00000240185 Q6P435 159 aa11.18□□□□□ -0.62
TARDBP-201ENST00000240185 NTN3O00634 580 aaPredicted RBP11.18□□□□□ -0.62
TARDBP-201ENST00000240185 EFNA4P52798 201 aa11.18□□□□□ -0.62
TARDBP-201ENST00000240185 DEFB125Q8N687 156 aa11.18□□□□□ -0.62
TARDBP-201ENST00000240185 DKK2Q9UBU2 259 aa11.18□□□□□ -0.62
TARDBP-201ENST00000240185 TP53BP1Q12888 1972 aaPredicted RBP11.18□□□□□ -0.62
TARDBP-201ENST00000240185 J3KT08 172 aa11.17□□□□□ -0.62
TARDBP-201ENST00000240185 IGKV1-16P04430 117 aa11.17□□□□□ -0.62
TARDBP-201ENST00000240185 COL4A5P29400 1685 aa11.17□□□□□ -0.62
TARDBP-201ENST00000240185 KIAA2026Q5HYC2 2103 aa11.17□□□□□ -0.62
TARDBP-201ENST00000240185 HS3ST6Q96QI5 342 aa11.17□□□□□ -0.62
TARDBP-201ENST00000240185 SIPA1L1O43166 1804 aa11.17□□□□□ -0.62
TARDBP-201ENST00000240185 SCN4AP35499 1836 aa11.17□□□□□ -0.62
TARDBP-201ENST00000240185 TRBV25-1A0A075B6N4 114 aa11.17□□□□□ -0.62
TARDBP-201ENST00000240185 IGHV2-70DA0A0C4DH43 119 aa11.17□□□□□ -0.62
TARDBP-201ENST00000240185 CACNA1EQ15878 2313 aa11.17□□□□□ -0.62
TARDBP-201ENST00000240185 USMG5Q96IX5 58 aa11.17□□□□□ -0.62
TARDBP-201ENST00000240185 PIP4P2Q8N4L2 257 aa11.17□□□□□ -0.62
TARDBP-201ENST00000240185 CLPSL1A2RUU4 121 aa11.17□□□□□ -0.62
TARDBP-201ENST00000240185 BUB1B-PAK6H3BSN5 160 aa11.17□□□□□ -0.62
TARDBP-201ENST00000240185 POU2AF1Q16633 256 aa11.17□□□□□ -0.62
TARDBP-201ENST00000240185 IGHV3-16A0A0C4DH30 117 aa11.16□□□□□ -0.62
TARDBP-201ENST00000240185 ZNF726P1Q15940 193 aa11.16□□□□□ -0.62
TARDBP-201ENST00000240185 CDPF1Q6NVV7 123 aa11.16□□□□□ -0.62
TARDBP-201ENST00000240185 SVIPQ8NHG7 77 aa11.16□□□□□ -0.62
TARDBP-201ENST00000240185 PNRC2Q9NPJ4 139 aaKnown RBP11.16□□□□□ -0.62
TARDBP-201ENST00000240185 ACYP1P07311 99 aa11.16□□□□□ -0.62
TARDBP-201ENST00000240185 BAALC-AS2P0C853 105 aa11.16□□□□□ -0.62
TARDBP-201ENST00000240185 SMIM2Q9BVW6 85 aa11.16□□□□□ -0.62
TARDBP-201ENST00000240185 DAZ1Q9NQZ3 744 aaKnown RBP11.16□□□□□ -0.62
TARDBP-201ENST00000240185 TMEM178BH3BS89 294 aa11.16□□□□□ -0.62
TARDBP-201ENST00000240185 H3BUX3 64 aa11.16□□□□□ -0.62
TARDBP-201ENST00000240185 OVOL3O00110 214 aa11.16□□□□□ -0.62
TARDBP-201ENST00000240185 NDUFS7O75251 213 aa11.16□□□□□ -0.62
TARDBP-201ENST00000240185 CRYGCP07315 174 aa11.16□□□□□ -0.62
TARDBP-201ENST00000240185 KIAA1217Q5T5P2 1943 aa11.16□□□□□ -0.62
TARDBP-201ENST00000240185 A0A1W2PPI3 338 aa11.15□□□□□ -0.62
TARDBP-201ENST00000240185 C20orf204Q6ZNR8 217 aa11.15□□□□□ -0.62
TARDBP-201ENST00000240185 SPRR3Q9UBC9 169 aa11.15□□□□□ -0.62
TARDBP-201ENST00000240185 TRBV19A0A075B6N1 114 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms