RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 SMLR1H3BR10 107 aa8.26□□□□□ -1.09
SF3B6-201ENST00000233468 NBEAP1P0C6P0 100 aa8.26□□□□□ -1.09
SF3B6-201ENST00000233468 RPL7L1Q6DKI1 246 aaKnown RBP8.26□□□□□ -1.09
SF3B6-201ENST00000233468 PQLC2Q6ZP29 291 aa8.26□□□□□ -1.09
SF3B6-201ENST00000233468 TCTE3Q8IZS6 198 aa8.26□□□□□ -1.09
SF3B6-201ENST00000233468 KCNRGQ8N5I3 272 aa8.26□□□□□ -1.09
SF3B6-201ENST00000233468 RNF182Q8N6D2 247 aa8.26□□□□□ -1.09
SF3B6-201ENST00000233468 OR10J6PQ8NGY7 276 aa8.26□□□□□ -1.09
SF3B6-201ENST00000233468 BLNKQ8WV28 456 aa8.26□□□□□ -1.09
SF3B6-201ENST00000233468 RNF141Q8WVD5 230 aa8.26□□□□□ -1.09
SF3B6-201ENST00000233468 RPUSD4Q96CM3 377 aaKnown RBP8.26□□□□□ -1.09
SF3B6-201ENST00000233468 SAT2Q96F10 170 aaPredicted RBP8.26□□□□□ -1.09
SF3B6-201ENST00000233468 C20orf173Q96LM9 149 aa8.26□□□□□ -1.09
SF3B6-201ENST00000233468 RARRES2Q99969 163 aa8.26□□□□□ -1.09
SF3B6-201ENST00000233468 RETNQ9HD89 108 aa8.26□□□□□ -1.09
SF3B6-201ENST00000233468 ZNF586Q9NXT0 402 aa8.26□□□□□ -1.09
SF3B6-201ENST00000233468 PFDN1O60925 122 aa8.25□□□□□ -1.09
SF3B6-201ENST00000233468 IGKV3-20P01619 116 aa8.25□□□□□ -1.09
SF3B6-201ENST00000233468 PYYP10082 97 aa8.25□□□□□ -1.09
SF3B6-201ENST00000233468 C4BPBP20851 252 aa8.25□□□□□ -1.09
SF3B6-201ENST00000233468 CDC34P49427 236 aaPredicted RBP8.25□□□□□ -1.09
SF3B6-201ENST00000233468 UBE2L3P68036 154 aaKnown RBP8.25□□□□□ -1.09
SF3B6-201ENST00000233468 HIST1H1AQ02539 215 aaPredicted RBP8.25□□□□□ -1.09
SF3B6-201ENST00000233468 FAM74A1Q5RGS3 127 aa8.25□□□□□ -1.09
SF3B6-201ENST00000233468 AKR1C8PQ5T2L2 129 aa8.25□□□□□ -1.09
SF3B6-201ENST00000233468 IGFL4Q6B9Z1 124 aa8.25□□□□□ -1.09
SF3B6-201ENST00000233468 FAM122CQ6P4D5 195 aa8.25□□□□□ -1.09
SF3B6-201ENST00000233468 AKAP14Q86UN6 197 aa8.25□□□□□ -1.09
SF3B6-201ENST00000233468 LYPD1Q8N2G4 141 aa8.25□□□□□ -1.09
SF3B6-201ENST00000233468 OR8A1Q8NGG7 326 aa8.25□□□□□ -1.09
SF3B6-201ENST00000233468 FAM167A-AS1Q96KT0 104 aa8.25□□□□□ -1.09
SF3B6-201ENST00000233468 ACTR3CQ9C0K3 210 aaPredicted RBP8.25□□□□□ -1.09
SF3B6-201ENST00000233468 LCE6AA0A183 80 aa8.24□□□□□ -1.09
SF3B6-201ENST00000233468 F6UB75 175 aa8.24□□□□□ -1.09
SF3B6-201ENST00000233468 H3BTX0 84 aa8.24□□□□□ -1.09
SF3B6-201ENST00000233468 SNRPCP09234 159 aaKnown RBP8.24□□□□□ -1.09
SF3B6-201ENST00000233468 CSN1S1P47710 185 aa8.24□□□□□ -1.09
SF3B6-201ENST00000233468 CNN1P51911 297 aaKnown RBP8.24□□□□□ -1.09
SF3B6-201ENST00000233468 RAB2AP61019 212 aa8.24□□□□□ -1.09
SF3B6-201ENST00000233468 GDF5OSQ5U4N7 250 aa8.24□□□□□ -1.09
SF3B6-201ENST00000233468 OR11H2Q8NH07 326 aa8.24□□□□□ -1.09
SF3B6-201ENST00000233468 HYLS1Q96M11 299 aa8.24□□□□□ -1.09
SF3B6-201ENST00000233468 XCL2Q9UBD3 114 aa8.24□□□□□ -1.09
SF3B6-201ENST00000233468 GOLT1BQ9Y3E0 138 aa8.24□□□□□ -1.09
SF3B6-201ENST00000233468 SLC17A3O00476 420 aa8.23□□□□□ -1.09
SF3B6-201ENST00000233468 BCL2L11O43521 198 aa8.23□□□□□ -1.09
SF3B6-201ENST00000233468 OR10J4P0C629 311 aa8.23□□□□□ -1.09
SF3B6-201ENST00000233468 MIFP14174 115 aa8.23□□□□□ -1.09
SF3B6-201ENST00000233468 TSPOP30536 169 aa8.23□□□□□ -1.09
SF3B6-201ENST00000233468 RXFP4Q8TDU9 374 aa8.23□□□□□ -1.09
SF3B6-201ENST00000233468 FXYD5Q96DB9 178 aa8.23□□□□□ -1.09
SF3B6-201ENST00000233468 ST6GAL2Q96JF0 529 aa8.23□□□□□ -1.09
SF3B6-201ENST00000233468 ZNF471Q9BX82 626 aaPredicted RBP8.23□□□□□ -1.09
SF3B6-201ENST00000233468 BIRC6Q9NR09 4857 aa8.22□□□□□ -1.09
SF3B6-201ENST00000233468 SMIM9A6NGZ8 99 aa8.22□□□□□ -1.09
SF3B6-201ENST00000233468 A8MTW9 85 aa8.22□□□□□ -1.09
SF3B6-201ENST00000233468 BOLA2-SMG1P6H3BVE0 249 aa8.22□□□□□ -1.09
SF3B6-201ENST00000233468 CXorf1O96002 111 aa8.22□□□□□ -1.09
SF3B6-201ENST00000233468 C1QBP02746 253 aa8.22□□□□□ -1.09
SF3B6-201ENST00000233468 GIG44P09565 113 aaPredicted RBP8.22□□□□□ -1.09
SF3B6-201ENST00000233468 HLA-DMBP28068 263 aa8.22□□□□□ -1.09
SF3B6-201ENST00000233468 DEFB1P60022 68 aa8.22□□□□□ -1.09
SF3B6-201ENST00000233468 EIF5AL1Q6IS14 154 aaKnown RBP8.22□□□□□ -1.09
SF3B6-201ENST00000233468 RPP25LQ8N5L8 163 aaKnown RBP8.22□□□□□ -1.09
SF3B6-201ENST00000233468 OR11H4Q8NGC9 324 aa8.22□□□□□ -1.09
SF3B6-201ENST00000233468 RAB24Q969Q5 203 aa8.22□□□□□ -1.09
SF3B6-201ENST00000233468 SH3BGRL3Q9H299 93 aa8.22□□□□□ -1.09
SF3B6-201ENST00000233468 EDA2RQ9HAV5 297 aa8.22□□□□□ -1.09
SF3B6-201ENST00000233468 CYTL1Q9NRR1 136 aa8.22□□□□□ -1.09
SF3B6-201ENST00000233468 TMEM167BQ9NRX6 74 aa8.22□□□□□ -1.09
SF3B6-201ENST00000233468 HYDINQ4G0P3 5121 aa8.22□□□□□ -1.09
SF3B6-201ENST00000233468 DNAH1Q9P2D7 4330 aa8.22□□□□□ -1.09
SF3B6-201ENST00000233468 hCG_2014768A0A024R1R8 64 aa8.21□□□□□ -1.1
SF3B6-201ENST00000233468 ZNF705FA8MVS1 300 aaPredicted RBP8.21□□□□□ -1.1
SF3B6-201ENST00000233468 ZNF705EA8MWA4 302 aaPredicted RBP8.21□□□□□ -1.1
SF3B6-201ENST00000233468 UMAD1C9J7I0 102 aa8.21□□□□□ -1.1
SF3B6-201ENST00000233468 NDUFB4O95168 129 aa8.21□□□□□ -1.1
SF3B6-201ENST00000233468 INSP01308 110 aa8.21□□□□□ -1.1
SF3B6-201ENST00000233468 SEC11BP0C7V7 166 aa8.21□□□□□ -1.1
SF3B6-201ENST00000233468 STAG3L2P0CL84 134 aa8.21□□□□□ -1.1
SF3B6-201ENST00000233468 STAG3L3P0CL85 134 aa8.21□□□□□ -1.1
SF3B6-201ENST00000233468 TPT1P13693 172 aaKnown RBP8.21□□□□□ -1.1
SF3B6-201ENST00000233468 RANP62826 216 aaKnown RBP8.21□□□□□ -1.1
SF3B6-201ENST00000233468 ICAM4Q14773 271 aa8.21□□□□□ -1.1
SF3B6-201ENST00000233468 TMUB2Q71RG4 321 aa8.21□□□□□ -1.1
SF3B6-201ENST00000233468 ARL6IP6Q8N6S5 226 aa8.21□□□□□ -1.1
SF3B6-201ENST00000233468 CSNK1G2-AS1Q8NCQ2 148 aa8.21□□□□□ -1.1
SF3B6-201ENST00000233468 CMTM2Q8TAZ6 248 aa8.21□□□□□ -1.1
SF3B6-201ENST00000233468 IGF2BP2-AS1Q96M15 143 aa8.21□□□□□ -1.1
SF3B6-201ENST00000233468 LINC00477Q96M19 166 aa8.21□□□□□ -1.1
SF3B6-201ENST00000233468 ODF3Q96PU9 254 aa8.21□□□□□ -1.1
SF3B6-201ENST00000233468 TMEM208Q9BTX3 173 aa8.21□□□□□ -1.1
SF3B6-201ENST00000233468 SLC35B3Q9H1N7 401 aa8.21□□□□□ -1.1
SF3B6-201ENST00000233468 C11orf68Q9H3H3 251 aaKnown RBP8.21□□□□□ -1.1
SF3B6-201ENST00000233468 RFNGQ9Y644 331 aa8.21□□□□□ -1.1
SF3B6-201ENST00000233468 CTXND1A0A1B0GTU2 59 aa8.2□□□□□ -1.1
SF3B6-201ENST00000233468 ZNF705DP0CH99 300 aaPredicted RBP8.2□□□□□ -1.1
SF3B6-201ENST00000233468 ZNF705BP0CI00 300 aaPredicted RBP8.2□□□□□ -1.1
SF3B6-201ENST00000233468 LEPP41159 167 aa8.2□□□□□ -1.1
SF3B6-201ENST00000233468 CDKN1BP46527 198 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms