RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 DYNAPQ8N1N2 210 aa12.72□□□□□ -0.37
LTBR-201ENST00000228918 DEFB125Q8N687 156 aa12.72□□□□□ -0.37
LTBR-201ENST00000228918 Q8N6K4 173 aa12.72□□□□□ -0.37
LTBR-201ENST00000228918 HSBP1L1C9JCN9 74 aa12.72□□□□□ -0.37
LTBR-201ENST00000228918 BVES-AS1Q5T3Y7 98 aa12.72□□□□□ -0.37
LTBR-201ENST00000228918 LINC01545Q5VT33 79 aa12.72□□□□□ -0.37
LTBR-201ENST00000228918 CCDC144NLQ6NUI1 221 aa12.72□□□□□ -0.37
LTBR-201ENST00000228918 ERASQ7Z444 233 aa12.72□□□□□ -0.37
LTBR-201ENST00000228918 SPTA1P02549 2419 aa12.71□□□□□ -0.37
LTBR-201ENST00000228918 NCBP2LA6PVI3 153 aaKnown RBP12.71□□□□□ -0.37
LTBR-201ENST00000228918 SH2D1AO60880 128 aa12.71□□□□□ -0.37
LTBR-201ENST00000228918 ADORA2A-AS1P86434 159 aa12.71□□□□□ -0.37
LTBR-201ENST00000228918 COX8CQ7Z4L0 72 aa12.71□□□□□ -0.37
LTBR-201ENST00000228918 VMO1Q7Z5L0 202 aa12.71□□□□□ -0.37
LTBR-201ENST00000228918 MCRIP2Q9BUT9 160 aaKnown RBP12.71□□□□□ -0.37
LTBR-201ENST00000228918 HRNRQ86YZ3 2850 aaPredicted RBP12.71□□□□□ -0.38
LTBR-201ENST00000228918 TMEM189A5PLL7 270 aa12.71□□□□□ -0.38
LTBR-201ENST00000228918 IGHV3-23P01764 117 aa12.71□□□□□ -0.38
LTBR-201ENST00000228918 RPL7P18124 248 aaKnown RBP12.71□□□□□ -0.38
LTBR-201ENST00000228918 SLC25A34Q6PIV7 304 aa12.71□□□□□ -0.38
LTBR-201ENST00000228918 LYZL1Q6UWQ5 148 aa12.71□□□□□ -0.38
LTBR-201ENST00000228918 FA2HQ7L5A8 372 aa12.71□□□□□ -0.38
LTBR-201ENST00000228918 SCRT2Q9NQ03 307 aa12.71□□□□□ -0.38
LTBR-201ENST00000228918 THYN1Q9P016 225 aa12.71□□□□□ -0.38
LTBR-201ENST00000228918 IGKV2-40A0A087WW87 121 aaPredicted RBP12.7□□□□□ -0.38
LTBR-201ENST00000228918 OR2T8A6NH00 312 aa12.7□□□□□ -0.38
LTBR-201ENST00000228918 H0Y8G0 127 aa12.7□□□□□ -0.38
LTBR-201ENST00000228918 IGKV2D-40P01614 121 aaPredicted RBP12.7□□□□□ -0.38
LTBR-201ENST00000228918 ZNF747Q9BV97 191 aa12.7□□□□□ -0.38
LTBR-201ENST00000228918 TIMM8BQ9Y5J9 83 aaPredicted RBP12.7□□□□□ -0.38
LTBR-201ENST00000228918 TMSB15BA0A087X1C1 80 aa12.69□□□□□ -0.38
LTBR-201ENST00000228918 NUDT3O95989 172 aa12.69□□□□□ -0.38
LTBR-201ENST00000228918 NHLH1Q02575 133 aa12.69□□□□□ -0.38
LTBR-201ENST00000228918 EBI3Q14213 229 aa12.69□□□□□ -0.38
LTBR-201ENST00000228918 C1orf122Q6ZSJ8 110 aa12.69□□□□□ -0.38
LTBR-201ENST00000228918 OR10AG1Q8NH19 301 aa12.69□□□□□ -0.38
LTBR-201ENST00000228918 PRSS3P2Q8NHM4 247 aa12.69□□□□□ -0.38
LTBR-201ENST00000228918 U3KQK5 164 aa12.69□□□□□ -0.38
LTBR-201ENST00000228918 RELNP78509 3460 aa12.69□□□□□ -0.38
LTBR-201ENST00000228918 TMEM213A2RRL7 107 aa12.69□□□□□ -0.38
LTBR-201ENST00000228918 OOSP1A8MZH6 123 aa12.69□□□□□ -0.38
LTBR-201ENST00000228918 MS4A6AQ9H2W1 248 aa12.69□□□□□ -0.38
LTBR-201ENST00000228918 D6R8Y8 96 aa12.68□□□□□ -0.38
LTBR-201ENST00000228918 CTSGP08311 255 aa12.68□□□□□ -0.38
LTBR-201ENST00000228918 FAM104BQ5XKR9 115 aa12.68□□□□□ -0.38
LTBR-201ENST00000228918 AMMECR1LQ6DCA0 310 aa12.68□□□□□ -0.38
LTBR-201ENST00000228918 PRR25Q96S07 402 aa12.68□□□□□ -0.38
LTBR-201ENST00000228918 EGR2P11161 476 aaPredicted RBP12.68□□□□□ -0.38
LTBR-201ENST00000228918 IFI27P40305 119 aaPredicted RBP12.68□□□□□ -0.38
LTBR-201ENST00000228918 MINOS1Q5TGZ0 78 aa12.68□□□□□ -0.38
LTBR-201ENST00000228918 PMCHL2Q9BQD1 86 aa12.68□□□□□ -0.38
LTBR-201ENST00000228918 RABAC1Q9UI14 185 aa12.68□□□□□ -0.38
LTBR-201ENST00000228918 MINOS1-NBL1R4GNA1 71 aa12.68□□□□□ -0.38
LTBR-201ENST00000228918 A0A096LNJ9 63 aa12.67□□□□□ -0.38
LTBR-201ENST00000228918 IGHV7-81A0A0B4J1V7 117 aa12.67□□□□□ -0.38
LTBR-201ENST00000228918 MUC21A0A0G2JKD1 596 aa12.67□□□□□ -0.38
LTBR-201ENST00000228918 MUC21A0A140T8X8 626 aa12.67□□□□□ -0.38
LTBR-201ENST00000228918 FBLL1A6NHQ2 334 aaKnown RBP12.67□□□□□ -0.38
LTBR-201ENST00000228918 SCGB2A1O75556 95 aa12.67□□□□□ -0.38
LTBR-201ENST00000228918 TMEM11P17152 192 aa12.67□□□□□ -0.38
LTBR-201ENST00000228918 MUC21Q5SSG8 566 aa12.67□□□□□ -0.38
LTBR-201ENST00000228918 C12orf54Q6X4T0 127 aa12.67□□□□□ -0.38
LTBR-201ENST00000228918 AMN1Q8IY45 258 aa12.67□□□□□ -0.38
LTBR-201ENST00000228918 SMAD5-AS1Q9Y6J3 95 aa12.67□□□□□ -0.38
LTBR-201ENST00000228918 CSMD1Q96PZ7 3565 aa12.67□□□□□ -0.38
LTBR-201ENST00000228918 K7ERU9 68 aa12.67□□□□□ -0.38
LTBR-201ENST00000228918 FAM106CPP0CH98 169 aa12.67□□□□□ -0.38
LTBR-201ENST00000228918 FAM106AQ4KMX7 169 aa12.67□□□□□ -0.38
LTBR-201ENST00000228918 SIGLEC8Q9NYZ4 499 aa12.67□□□□□ -0.38
LTBR-201ENST00000228918 NCR2O95944 276 aa12.66□□□□□ -0.38
LTBR-201ENST00000228918 IGHG4P01861 327 aa12.66□□□□□ -0.38
LTBR-201ENST00000228918 LOXL1Q08397 574 aaPredicted RBP12.66□□□□□ -0.38
LTBR-201ENST00000228918 ORMDL3Q8N138 153 aa12.66□□□□□ -0.38
LTBR-201ENST00000228918 Q8TAT8 98 aa12.66□□□□□ -0.38
LTBR-201ENST00000228918 PRELID3AQ96N28 172 aa12.66□□□□□ -0.38
LTBR-201ENST00000228918 GAGE12BA1L429 117 aa12.65□□□□□ -0.38
LTBR-201ENST00000228918 CD5LO43866 347 aa12.65□□□□□ -0.38
LTBR-201ENST00000228918 ZFP36P26651 326 aaKnown RBP12.65□□□□□ -0.38
LTBR-201ENST00000228918 ZNF80P51504 273 aaPredicted RBP12.65□□□□□ -0.38
LTBR-201ENST00000228918 VGLL1Q99990 258 aa12.65□□□□□ -0.38
LTBR-201ENST00000228918 MRPL51Q4U2R6 128 aaKnown RBP12.65□□□□□ -0.38
LTBR-201ENST00000228918 Q8N9W7 124 aa12.65□□□□□ -0.38
LTBR-201ENST00000228918 MSRB2Q9Y3D2 182 aa12.65□□□□□ -0.38
LTBR-201ENST00000228918 WNK2Q9Y3S1 2297 aa12.65□□□□□ -0.39
LTBR-201ENST00000228918 LOC389332A0A1B0GUA5 103 aa12.64□□□□□ -0.39
LTBR-201ENST00000228918 TMEM238C9JI98 176 aa12.64□□□□□ -0.39
LTBR-201ENST00000228918 HLA-DMBP28068 263 aa12.64□□□□□ -0.39
LTBR-201ENST00000228918 IGFL4Q6B9Z1 124 aa12.64□□□□□ -0.39
LTBR-201ENST00000228918 IGLC6P0CF74 106 aa12.64□□□□□ -0.39
LTBR-201ENST00000228918 DTX2Q86UW9 622 aa12.64□□□□□ -0.39
LTBR-201ENST00000228918 SIRPDQ9H106 197 aa12.64□□□□□ -0.39
LTBR-201ENST00000228918 NBASA2RRP1 2371 aa12.64□□□□□ -0.39
LTBR-201ENST00000228918 BMI1P35226 326 aa12.63□□□□□ -0.39
LTBR-201ENST00000228918 KLRB1Q12918 225 aa12.63□□□□□ -0.39
LTBR-201ENST00000228918 FER1L6-AS1Q8NA97 138 aa12.63□□□□□ -0.39
LTBR-201ENST00000228918 CHTOPQ9Y3Y2 248 aaKnown RBP12.63□□□□□ -0.39
LTBR-201ENST00000228918 TRAV8-6A0A0B4J262 113 aa12.63□□□□□ -0.39
LTBR-201ENST00000228918 COX8AP10176 69 aa12.63□□□□□ -0.39
LTBR-201ENST00000228918 S100A7P31151 101 aa12.63□□□□□ -0.39
LTBR-201ENST00000228918 HIST1H1AQ02539 215 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms