RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 SMIM27A0A1W2PRY6 76 aa11.02□□□□□ -0.65
NFKB1-201ENST00000226574 CCL25O15444 150 aa11.02□□□□□ -0.65
NFKB1-201ENST00000226574 ATP5LO75964 103 aa11.02□□□□□ -0.65
NFKB1-201ENST00000226574 LYRM7Q5U5X0 104 aa11.02□□□□□ -0.65
NFKB1-201ENST00000226574 EEF1AKMT3Q96AZ1 226 aa11.02□□□□□ -0.65
NFKB1-201ENST00000226574 CELSR3Q9NYQ7 3312 aa11.02□□□□□ -0.65
NFKB1-201ENST00000226574 TMEM238LA0A1B0GVL6 79 aa11.01□□□□□ -0.65
NFKB1-201ENST00000226574 A6NJY4 79 aa11.01□□□□□ -0.65
NFKB1-201ENST00000226574 K7EM74 188 aa11.01□□□□□ -0.65
NFKB1-201ENST00000226574 CEACAM8P31997 349 aaPredicted RBP11.01□□□□□ -0.65
NFKB1-201ENST00000226574 RITA1Q96K30 269 aa11.01□□□□□ -0.65
NFKB1-201ENST00000226574 CST9LQ9H4G1 147 aa11.01□□□□□ -0.65
NFKB1-201ENST00000226574 MRPL36Q9P0J6 103 aaKnown RBP11.01□□□□□ -0.65
NFKB1-201ENST00000226574 KMT2EQ8IZD2 1858 aa11.01□□□□□ -0.65
NFKB1-201ENST00000226574 C19orf67A6NJJ6 358 aa11.01□□□□□ -0.65
NFKB1-201ENST00000226574 E7EQL1 145 aa11.01□□□□□ -0.65
NFKB1-201ENST00000226574 TMEM158Q8WZ71 300 aa11.01□□□□□ -0.65
NFKB1-201ENST00000226574 KIR2DL4Q99706 377 aa11.01□□□□□ -0.65
NFKB1-201ENST00000226574 WDFY4Q6ZS81 3184 aa11.01□□□□□ -0.65
NFKB1-201ENST00000226574 IGLV3-9A0A075B6K5 115 aa11.01□□□□□ -0.65
NFKB1-201ENST00000226574 DPM2O94777 84 aa11.01□□□□□ -0.65
NFKB1-201ENST00000226574 PSG3Q16557 428 aa11.01□□□□□ -0.65
NFKB1-201ENST00000226574 IGKV3OR2-268A0A0C4DH90 116 aa11□□□□□ -0.65
NFKB1-201ENST00000226574 PSMB11A5LHX3 300 aa11□□□□□ -0.65
NFKB1-201ENST00000226574 RASL11AQ6T310 242 aa11□□□□□ -0.65
NFKB1-201ENST00000226574 IGKV3D-20A0A0C4DH25 116 aa11□□□□□ -0.65
NFKB1-201ENST00000226574 HLA-DMBP28068 263 aa11□□□□□ -0.65
NFKB1-201ENST00000226574 ZNF479Q96JC4 524 aa11□□□□□ -0.65
NFKB1-201ENST00000226574 MS4A6AQ9H2W1 248 aa11□□□□□ -0.65
NFKB1-201ENST00000226574 FAM215AQ9Y5M1 114 aa11□□□□□ -0.65
NFKB1-201ENST00000226574 IGKCP01834 107 aa10.99□□□□□ -0.65
NFKB1-201ENST00000226574 LGALS3P17931 250 aaKnown RBP10.99□□□□□ -0.65
NFKB1-201ENST00000226574 LOXP28300 417 aaPredicted RBP10.99□□□□□ -0.65
NFKB1-201ENST00000226574 PATE2Q6UY27 113 aa10.99□□□□□ -0.65
NFKB1-201ENST00000226574 RNASE8Q8TDE3 154 aaKnown RBP10.99□□□□□ -0.65
NFKB1-201ENST00000226574 YPEL4Q96NS1 127 aa10.99□□□□□ -0.65
NFKB1-201ENST00000226574 FREM2Q5SZK8 3169 aa10.99□□□□□ -0.65
NFKB1-201ENST00000226574 A0A0U1RRA0 63 aa10.99□□□□□ -0.65
NFKB1-201ENST00000226574 K7EMI3 77 aa10.99□□□□□ -0.65
NFKB1-201ENST00000226574 SEC11AP67812 179 aa10.99□□□□□ -0.65
NFKB1-201ENST00000226574 VCANP13611 3396 aa10.99□□□□□ -0.65
NFKB1-201ENST00000226574 IGLV1-44P01699 117 aa10.99□□□□□ -0.65
NFKB1-201ENST00000226574 C5orf64Q2M2E5 130 aa10.99□□□□□ -0.65
NFKB1-201ENST00000226574 BRD3OSQ6XYD6 125 aa10.99□□□□□ -0.65
NFKB1-201ENST00000226574 A0A1B0GW15 77 aa10.99□□□□□ -0.65
NFKB1-201ENST00000226574 CRXO43186 299 aaPredicted RBP10.99□□□□□ -0.65
NFKB1-201ENST00000226574 ASIPP42127 132 aa10.99□□□□□ -0.65
NFKB1-201ENST00000226574 HSD52Q0P140 79 aa10.99□□□□□ -0.65
NFKB1-201ENST00000226574 OCIAD2Q56VL3 154 aa10.98□□□□□ -0.65
NFKB1-201ENST00000226574 C14orf178Q8N769 122 aaPredicted RBP10.98□□□□□ -0.65
NFKB1-201ENST00000226574 TRAV40A0A0B4J280 105 aa10.98□□□□□ -0.65
NFKB1-201ENST00000226574 TMEM249Q2WGJ8 235 aa10.98□□□□□ -0.65
NFKB1-201ENST00000226574 OR4X2Q8NGF9 303 aa10.98□□□□□ -0.65
NFKB1-201ENST00000226574 NXT2Q9NPJ8 142 aaKnown RBP10.98□□□□□ -0.65
NFKB1-201ENST00000226574 TRAV26-2A0A0B4J265 109 aa10.97□□□□□ -0.65
NFKB1-201ENST00000226574 CD7P09564 240 aa10.97□□□□□ -0.65
NFKB1-201ENST00000226574 ATP5J2P56134 94 aa10.97□□□□□ -0.65
NFKB1-201ENST00000226574 Q6ZS92 163 aa10.97□□□□□ -0.65
NFKB1-201ENST00000226574 TTTY13Q9BZ97 58 aa10.97□□□□□ -0.65
NFKB1-201ENST00000226574 ID1P41134 155 aa10.97□□□□□ -0.65
NFKB1-201ENST00000226574 DAZAP2Q15038 168 aaPredicted RBP10.97□□□□□ -0.65
NFKB1-201ENST00000226574 FAM120AOSQ5T036 256 aa10.97□□□□□ -0.65
NFKB1-201ENST00000226574 C1orf229Q6ZS94 237 aaPredicted RBP10.97□□□□□ -0.65
NFKB1-201ENST00000226574 FNDC10F2Z333 226 aa10.97□□□□□ -0.65
NFKB1-201ENST00000226574 CD5LO43866 347 aa10.97□□□□□ -0.65
NFKB1-201ENST00000226574 CEACAM4O75871 244 aa10.97□□□□□ -0.65
NFKB1-201ENST00000226574 NDUFB8O95169 186 aa10.97□□□□□ -0.65
NFKB1-201ENST00000226574 TMEM155Q4W5P6 130 aa10.97□□□□□ -0.65
NFKB1-201ENST00000226574 SAMD13Q5VXD3 122 aa10.97□□□□□ -0.65
NFKB1-201ENST00000226574 TMEM131Q92545 1883 aa10.96□□□□□ -0.65
NFKB1-201ENST00000226574 ZNF815PA8K554 130 aa10.96□□□□□ -0.65
NFKB1-201ENST00000226574 G3V318 75 aa10.96□□□□□ -0.65
NFKB1-201ENST00000226574 DKK4Q9UBT3 224 aa10.96□□□□□ -0.65
NFKB1-201ENST00000226574 TRBV19A0A075B6N1 114 aa10.96□□□□□ -0.65
NFKB1-201ENST00000226574 VMO1Q7Z5L0 202 aa10.96□□□□□ -0.65
NFKB1-201ENST00000226574 SHANK2-AS3Q9BTD1 123 aa10.96□□□□□ -0.65
NFKB1-201ENST00000226574 CTSZQ9UBR2 303 aa10.96□□□□□ -0.65
NFKB1-201ENST00000226574 SPEGQ15772 3267 aa10.96□□□□□ -0.66
NFKB1-201ENST00000226574 RAB9AP51151 201 aa10.96□□□□□ -0.66
NFKB1-201ENST00000226574 ZNF833PQ6ZTB9 187 aa10.96□□□□□ -0.66
NFKB1-201ENST00000226574 PKD1L2Q7Z442 2459 aa10.96□□□□□ -0.66
NFKB1-201ENST00000226574 C22orf46C9J442 243 aa10.95□□□□□ -0.66
NFKB1-201ENST00000226574 IGLC1P0CG04 106 aa10.95□□□□□ -0.66
NFKB1-201ENST00000226574 CLEC2AQ6UVW9 174 aa10.95□□□□□ -0.66
NFKB1-201ENST00000226574 SIGLEC8Q9NYZ4 499 aa10.95□□□□□ -0.66
NFKB1-201ENST00000226574 ITGB1BP1O14713 200 aa10.95□□□□□ -0.66
NFKB1-201ENST00000226574 NPYP01303 97 aa10.95□□□□□ -0.66
NFKB1-201ENST00000226574 LY6DQ14210 128 aa10.95□□□□□ -0.66
NFKB1-201ENST00000226574 FAM106AQ4KMX7 169 aa10.95□□□□□ -0.66
NFKB1-201ENST00000226574 DKK2Q9UBU2 259 aa10.95□□□□□ -0.66
NFKB1-201ENST00000226574 PPBPP02775 128 aa10.94□□□□□ -0.66
NFKB1-201ENST00000226574 GATA1P15976 413 aaPredicted RBP10.94□□□□□ -0.66
NFKB1-201ENST00000226574 SRSF1Q07955 248 aaKnown RBP eCLIP10.94□□□□□ -0.66
NFKB1-201ENST00000226574 MRPL51Q4U2R6 128 aaKnown RBP10.94□□□□□ -0.66
NFKB1-201ENST00000226574 BVES-AS1Q5T3Y7 98 aa10.94□□□□□ -0.66
NFKB1-201ENST00000226574 FAM231DQ6ZW35 169 aa10.94□□□□□ -0.66
NFKB1-201ENST00000226574 PCP2Q8IVA1 136 aa10.94□□□□□ -0.66
NFKB1-201ENST00000226574 FAM167A-AS1Q96KT0 104 aa10.94□□□□□ -0.66
NFKB1-201ENST00000226574 K7ERJ3 54 aa10.94□□□□□ -0.66
NFKB1-201ENST00000226574 VGLL1Q99990 258 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms