RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 OR10J4P0C629 311 aa13.18□□□□□ -0.3
PFN1-201ENST00000225655 NBEAP1P0C6P0 100 aa13.18□□□□□ -0.3
PFN1-201ENST00000225655 STHQ8IWL8 128 aa13.18□□□□□ -0.3
PFN1-201ENST00000225655 ZNF738Q8NE65 137 aa13.18□□□□□ -0.3
PFN1-201ENST00000225655 ZNF331Q9NQX6 463 aaPredicted RBP13.18□□□□□ -0.3
PFN1-201ENST00000225655 ZNF586Q9NXT0 402 aa13.18□□□□□ -0.3
PFN1-201ENST00000225655 SNRPCP09234 159 aaKnown RBP13.17□□□□□ -0.3
PFN1-201ENST00000225655 STAG3L2P0CL84 134 aa13.17□□□□□ -0.3
PFN1-201ENST00000225655 STAG3L3P0CL85 134 aa13.17□□□□□ -0.3
PFN1-201ENST00000225655 IQCF2Q8IXL9 164 aa13.17□□□□□ -0.3
PFN1-201ENST00000225655 PHYHIPLQ96FC7 376 aa13.17□□□□□ -0.3
PFN1-201ENST00000225655 TMEM167BQ9NRX6 74 aa13.17□□□□□ -0.3
PFN1-201ENST00000225655 H3BTX0 84 aa13.16□□□□□ -0.3
PFN1-201ENST00000225655 HMGB3O15347 200 aaKnown RBP13.16□□□□□ -0.3
PFN1-201ENST00000225655 ARL14EPLP0DKL9 152 aa13.16□□□□□ -0.3
PFN1-201ENST00000225655 PSG3Q16557 428 aa13.16□□□□□ -0.3
PFN1-201ENST00000225655 ACTL10Q5JWF8 245 aa13.16□□□□□ -0.3
PFN1-201ENST00000225655 FAM74A1Q5RGS3 127 aa13.16□□□□□ -0.3
PFN1-201ENST00000225655 FOXI2Q6ZQN5 318 aa13.16□□□□□ -0.3
PFN1-201ENST00000225655 FAM213BQ8TBF2 198 aa13.16□□□□□ -0.3
PFN1-201ENST00000225655 FXYD5Q96DB9 178 aa13.16□□□□□ -0.3
PFN1-201ENST00000225655 C17orf77Q96MU5 243 aa13.16□□□□□ -0.3
PFN1-201ENST00000225655 RARRES2Q99969 163 aa13.16□□□□□ -0.3
PFN1-201ENST00000225655 PRELID1Q9Y255 219 aa13.16□□□□□ -0.3
PFN1-201ENST00000225655 KLK5Q9Y337 293 aaPredicted RBP13.16□□□□□ -0.3
PFN1-201ENST00000225655 EPPK1P58107 5090 aaKnown RBP13.16□□□□□ -0.3
PFN1-201ENST00000225655 TEX46H3BTG2 121 aa13.15□□□□□ -0.3
PFN1-201ENST00000225655 LYPD1Q8N2G4 141 aa13.15□□□□□ -0.3
PFN1-201ENST00000225655 RNF182Q8N6D2 247 aa13.15□□□□□ -0.3
PFN1-201ENST00000225655 HYDINQ4G0P3 5121 aa13.15□□□□□ -0.3
PFN1-201ENST00000225655 TRAV8-2A0A0B4J237 113 aa13.14□□□□□ -0.31
PFN1-201ENST00000225655 MAP1LC3B2A6NCE7 125 aa13.14□□□□□ -0.31
PFN1-201ENST00000225655 SLC17A3O00476 420 aa13.14□□□□□ -0.31
PFN1-201ENST00000225655 LY6G6CO95867 125 aa13.14□□□□□ -0.31
PFN1-201ENST00000225655 GCHFRP30047 84 aa13.14□□□□□ -0.31
PFN1-201ENST00000225655 CSN1S1P47710 185 aa13.14□□□□□ -0.31
PFN1-201ENST00000225655 NUTF2P61970 127 aaKnown RBP13.14□□□□□ -0.31
PFN1-201ENST00000225655 MRPL53Q96EL3 112 aaKnown RBP13.14□□□□□ -0.31
PFN1-201ENST00000225655 SAT2Q96F10 170 aaPredicted RBP13.14□□□□□ -0.31
PFN1-201ENST00000225655 MAP1LC3BQ9GZQ8 125 aa13.14□□□□□ -0.31
PFN1-201ENST00000225655 KNCNA6PVL3 124 aa13.13□□□□□ -0.31
PFN1-201ENST00000225655 DUSP14O95147 198 aaKnown RBP13.13□□□□□ -0.31
PFN1-201ENST00000225655 CA1P00915 261 aaPredicted RBP13.13□□□□□ -0.31
PFN1-201ENST00000225655 IGFL4Q6B9Z1 124 aa13.13□□□□□ -0.31
PFN1-201ENST00000225655 OR11H2Q8NH07 326 aa13.13□□□□□ -0.31
PFN1-201ENST00000225655 RPUSD4Q96CM3 377 aaKnown RBP13.13□□□□□ -0.31
PFN1-201ENST00000225655 ZNF503Q96F45 646 aa13.13□□□□□ -0.31
PFN1-201ENST00000225655 C11orf68Q9H3H3 251 aaKnown RBP13.13□□□□□ -0.31
PFN1-201ENST00000225655 SAV1Q9H4B6 383 aaPredicted RBP13.13□□□□□ -0.31
PFN1-201ENST00000225655 ALMS1Q8TCU4 4167 aa13.13□□□□□ -0.31
PFN1-201ENST00000225655 BOLA2-SMG1P6H3BVE0 249 aa13.12□□□□□ -0.31
PFN1-201ENST00000225655 EIF3GO75821 320 aaKnown RBP eCLIP13.12□□□□□ -0.31
PFN1-201ENST00000225655 H2AFB1P0C5Y9 115 aa13.12□□□□□ -0.31
PFN1-201ENST00000225655 HLA-DRB4P13762 266 aa13.12□□□□□ -0.31
PFN1-201ENST00000225655 SULT1A2P50226 295 aa13.12□□□□□ -0.31
PFN1-201ENST00000225655 RANP62826 216 aaKnown RBP13.12□□□□□ -0.31
PFN1-201ENST00000225655 OR10J6PQ8NGY7 276 aa13.12□□□□□ -0.31
PFN1-201ENST00000225655 CMTM2Q8TAZ6 248 aa13.12□□□□□ -0.31
PFN1-201ENST00000225655 SFT2D1Q8WV19 159 aa13.12□□□□□ -0.31
PFN1-201ENST00000225655 PHLDA1Q8WV24 401 aaPredicted RBP13.12□□□□□ -0.31
PFN1-201ENST00000225655 C20orf173Q96LM9 149 aa13.12□□□□□ -0.31
PFN1-201ENST00000225655 HLA-DRB4X5D2U9 266 aa13.12□□□□□ -0.31
PFN1-201ENST00000225655 NDUFB4O95168 129 aa13.11□□□□□ -0.31
PFN1-201ENST00000225655 ICAM4Q14773 271 aa13.11□□□□□ -0.31
PFN1-201ENST00000225655 ZNF726P1Q15940 193 aa13.11□□□□□ -0.31
PFN1-201ENST00000225655 MORN3Q6PF18 240 aaPredicted RBP13.11□□□□□ -0.31
PFN1-201ENST00000225655 RXFP4Q8TDU9 374 aa13.11□□□□□ -0.31
PFN1-201ENST00000225655 Q9H3A6 140 aa13.11□□□□□ -0.31
PFN1-201ENST00000225655 OTORQ9NRC9 128 aa13.11□□□□□ -0.31
PFN1-201ENST00000225655 PPP1R14DQ9NXH3 145 aa13.11□□□□□ -0.31
PFN1-201ENST00000225655 A0A0J9YX75 114 aa13.1□□□□□ -0.31
PFN1-201ENST00000225655 HBE1P02100 147 aa13.1□□□□□ -0.31
PFN1-201ENST00000225655 FHITP49789 147 aa13.1□□□□□ -0.31
PFN1-201ENST00000225655 PPT1P50897 306 aa13.1□□□□□ -0.31
PFN1-201ENST00000225655 HIST1H1AQ02539 215 aaPredicted RBP13.1□□□□□ -0.31
PFN1-201ENST00000225655 SSX7Q7RTT5 188 aa13.1□□□□□ -0.31
PFN1-201ENST00000225655 TRPT1Q86TN4 253 aaKnown RBP13.1□□□□□ -0.31
PFN1-201ENST00000225655 EXOC3-AS1Q8N2X6 119 aa13.1□□□□□ -0.31
PFN1-201ENST00000225655 OR4B1Q8NGF8 309 aa13.1□□□□□ -0.31
PFN1-201ENST00000225655 C11orf45Q8TAV5 145 aa13.1□□□□□ -0.31
PFN1-201ENST00000225655 MBD3L1Q8WWY6 194 aa13.1□□□□□ -0.31
PFN1-201ENST00000225655 BOLA1Q9Y3E2 137 aa13.1□□□□□ -0.31
PFN1-201ENST00000225655 PLECQ15149 4684 aaKnown RBP13.09□□□□□ -0.31
PFN1-201ENST00000225655 H3BMM0 161 aa13.09□□□□□ -0.31
PFN1-201ENST00000225655 HLA-DMBP28068 263 aa13.09□□□□□ -0.31
PFN1-201ENST00000225655 FGF8P55075 233 aaPredicted RBP13.09□□□□□ -0.31
PFN1-201ENST00000225655 OR8A1Q8NGG7 326 aa13.09□□□□□ -0.31
PFN1-201ENST00000225655 NKX6-2Q9C056 277 aaPredicted RBP13.09□□□□□ -0.31
PFN1-201ENST00000225655 AGRNO00468 2067 aa13.08□□□□□ -0.32
PFN1-201ENST00000225655 ZNF705EA8MWA4 302 aaPredicted RBP13.08□□□□□ -0.32
PFN1-201ENST00000225655 ALKAL2Q6UX46 152 aa13.08□□□□□ -0.32
PFN1-201ENST00000225655 SUN5Q8TC36 379 aa13.08□□□□□ -0.32
PFN1-201ENST00000225655 CLUHP3Q96NS8 147 aa13.08□□□□□ -0.32
PFN1-201ENST00000225655 C1QTNF4Q9BXJ3 329 aa13.08□□□□□ -0.32
PFN1-201ENST00000225655 A0A1W2PRE2 83 aa13.07□□□□□ -0.32
PFN1-201ENST00000225655 PGPA6NDG6 321 aa13.07□□□□□ -0.32
PFN1-201ENST00000225655 ZNF705FA8MVS1 300 aaPredicted RBP13.07□□□□□ -0.32
PFN1-201ENST00000225655 F6UB75 175 aa13.07□□□□□ -0.32
PFN1-201ENST00000225655 GIG44P09565 113 aaPredicted RBP13.07□□□□□ -0.32
PFN1-201ENST00000225655 NANOS2P60321 138 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms