RNA–Protein interactions for RNA: ENST00000225603.8

CBX1-201, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-201ENST00000225603 PROK1P58294 105 aa13.8□□□□□ -0.2
CBX1-201ENST00000225603 RANP62826 216 aaKnown RBP13.8□□□□□ -0.2
CBX1-201ENST00000225603 DEFB136Q30KP8 78 aa13.8□□□□□ -0.2
CBX1-201ENST00000225603 FAM209BQ5JX69 171 aa13.8□□□□□ -0.2
CBX1-201ENST00000225603 BLNKQ8WV28 456 aa13.8□□□□□ -0.2
CBX1-201ENST00000225603 RABAC1Q9UI14 185 aa13.8□□□□□ -0.2
CBX1-201ENST00000225603 IGHV4OR15-8A0A075B7B6 117 aa13.8□□□□□ -0.2
CBX1-201ENST00000225603 A0A087WW49 117 aa13.8□□□□□ -0.2
CBX1-201ENST00000225603 CDPF1Q6NVV7 123 aa13.8□□□□□ -0.2
CBX1-201ENST00000225603 IGHV3-49A0A0A0MS15 119 aa13.79□□□□□ -0.2
CBX1-201ENST00000225603 NDUFA4O00483 81 aa13.79□□□□□ -0.2
CBX1-201ENST00000225603 APOHP02749 345 aaPredicted RBP13.79□□□□□ -0.2
CBX1-201ENST00000225603 NBEAP1P0C6P0 100 aa13.79□□□□□ -0.2
CBX1-201ENST00000225603 CBLN1P23435 193 aa13.79□□□□□ -0.2
CBX1-201ENST00000225603 IBA57Q5T440 356 aaKnown RBP13.79□□□□□ -0.2
CBX1-201ENST00000225603 OR8I2Q8N0Y5 310 aa13.79□□□□□ -0.2
CBX1-201ENST00000225603 NHLRC2Q8NBF2 726 aa13.79□□□□□ -0.2
CBX1-201ENST00000225603 IGHV3OR16-13A0A075B7E8 117 aa13.79□□□□□ -0.2
CBX1-201ENST00000225603 IGHV3-74A0A0B4J1X5 117 aa13.79□□□□□ -0.2
CBX1-201ENST00000225603 GNG5P63218 68 aa13.79□□□□□ -0.2
CBX1-201ENST00000225603 TRAV34A0A0B4J273 112 aa13.78□□□□□ -0.2
CBX1-201ENST00000225603 IGHV3-66A0A0C4DH42 116 aa13.78□□□□□ -0.2
CBX1-201ENST00000225603 CITED2Q99967 270 aaPredicted RBP13.78□□□□□ -0.2
CBX1-201ENST00000225603 EPDR1Q9UM22 224 aa13.78□□□□□ -0.2
CBX1-201ENST00000225603 PGPA6NDG6 321 aa13.78□□□□□ -0.2
CBX1-201ENST00000225603 SLC25A5P05141 298 aaKnown RBP13.78□□□□□ -0.2
CBX1-201ENST00000225603 KRTAP10-3P60369 221 aa13.78□□□□□ -0.2
CBX1-201ENST00000225603 BAGE2Q86Y30 109 aa13.78□□□□□ -0.2
CBX1-201ENST00000225603 C4orf3Q8WVX3 66 aa13.78□□□□□ -0.2
CBX1-201ENST00000225603 TMEM190Q8WZ59 177 aa13.78□□□□□ -0.2
CBX1-201ENST00000225603 DUX3Q96PT4 197 aa13.78□□□□□ -0.2
CBX1-201ENST00000225603 LINC00587B1AMM8 73 aa13.77□□□□□ -0.21
CBX1-201ENST00000225603 DNLZQ5SXM8 178 aa13.77□□□□□ -0.21
CBX1-201ENST00000225603 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.77□□□□□ -0.21
CBX1-201ENST00000225603 KLHL30-AS1Q8NEE0 82 aa13.77□□□□□ -0.21
CBX1-201ENST00000225603 A0A1W2PRX2 142 aa13.76□□□□□ -0.21
CBX1-201ENST00000225603 H3BTX0 84 aa13.76□□□□□ -0.21
CBX1-201ENST00000225603 MRPS12O15235 138 aaKnown RBP13.76□□□□□ -0.21
CBX1-201ENST00000225603 TMEM183BQ1AE95 376 aa13.76□□□□□ -0.21
CBX1-201ENST00000225603 GPHB5Q86YW7 130 aa13.76□□□□□ -0.21
CBX1-201ENST00000225603 METTL26Q96S19 204 aa13.76□□□□□ -0.21
CBX1-201ENST00000225603 MRPL18Q9H0U6 180 aaKnown RBP13.76□□□□□ -0.21
CBX1-201ENST00000225603 EDN2P20800 178 aa13.76□□□□□ -0.21
CBX1-201ENST00000225603 TM4SF20Q53R12 229 aa13.76□□□□□ -0.21
CBX1-201ENST00000225603 C8orf86Q6ZUL3 223 aa13.76□□□□□ -0.21
CBX1-201ENST00000225603 TMEM14CQ9P0S9 112 aa13.76□□□□□ -0.21
CBX1-201ENST00000225603 U3KQE9 123 aa13.76□□□□□ -0.21
CBX1-201ENST00000225603 SMIM27A0A1W2PRY6 76 aa13.75□□□□□ -0.21
CBX1-201ENST00000225603 ZNF705GA8MUZ8 300 aaPredicted RBP13.75□□□□□ -0.21
CBX1-201ENST00000225603 BUB3O43684 328 aa13.75□□□□□ -0.21
CBX1-201ENST00000225603 FRMD6-AS1P0C7T7 363 aa13.75□□□□□ -0.21
CBX1-201ENST00000225603 HOXD3P31249 432 aaPredicted RBP13.75□□□□□ -0.21
CBX1-201ENST00000225603 FAM231DQ6ZW35 169 aa13.75□□□□□ -0.21
CBX1-201ENST00000225603 KLF12Q9Y4X4 402 aa13.75□□□□□ -0.21
CBX1-201ENST00000225603 TCL1AP56279 114 aa13.75□□□□□ -0.21
CBX1-201ENST00000225603 UBE2G1P62253 170 aa13.75□□□□□ -0.21
CBX1-201ENST00000225603 GBGT1Q8N5D6 347 aa13.75□□□□□ -0.21
CBX1-201ENST00000225603 C5orf17Q8NAS9 161 aa13.75□□□□□ -0.21
CBX1-201ENST00000225603 OR11H1Q8NG94 326 aa13.75□□□□□ -0.21
CBX1-201ENST00000225603 C17orf77Q96MU5 243 aa13.75□□□□□ -0.21
CBX1-201ENST00000225603 GNB1LQ9BYB4 327 aa13.75□□□□□ -0.21
CBX1-201ENST00000225603 Q9H3A6 140 aa13.75□□□□□ -0.21
CBX1-201ENST00000225603 ZNF586Q9NXT0 402 aa13.75□□□□□ -0.21
CBX1-201ENST00000225603 SNURFLB1AK76 121 aa13.74□□□□□ -0.21
CBX1-201ENST00000225603 SLURP1P55000 103 aa13.74□□□□□ -0.21
CBX1-201ENST00000225603 RPL19P84098 196 aaKnown RBP13.74□□□□□ -0.21
CBX1-201ENST00000225603 FAM106AQ4KMX7 169 aa13.74□□□□□ -0.21
CBX1-201ENST00000225603 TMEM18Q96B42 140 aa13.74□□□□□ -0.21
CBX1-201ENST00000225603 ATG101Q9BSB4 218 aa13.74□□□□□ -0.21
CBX1-201ENST00000225603 A0A1B0GUS0 222 aa13.74□□□□□ -0.21
CBX1-201ENST00000225603 SYNJ2BPP57105 145 aa13.74□□□□□ -0.21
CBX1-201ENST00000225603 BPIFA4PQ86YQ2 179 aa13.74□□□□□ -0.21
CBX1-201ENST00000225603 RPH3ALQ9UNE2 315 aa13.74□□□□□ -0.21
CBX1-201ENST00000225603 SMAD5-AS1Q9Y6J3 95 aa13.74□□□□□ -0.21
CBX1-201ENST00000225603 IGLC2P0DOY2 106 aa13.73□□□□□ -0.21
CBX1-201ENST00000225603 JOSD1Q15040 202 aaPredicted RBP13.73□□□□□ -0.21
CBX1-201ENST00000225603 TMEM256Q8N2U0 113 aa13.73□□□□□ -0.21
CBX1-201ENST00000225603 OR1N2Q8NGR9 330 aa13.73□□□□□ -0.21
CBX1-201ENST00000225603 SPINK4O60575 86 aa13.72□□□□□ -0.21
CBX1-201ENST00000225603 CA1P00915 261 aaPredicted RBP13.72□□□□□ -0.21
CBX1-201ENST00000225603 HIST1H1EP10412 219 aaKnown RBP13.72□□□□□ -0.21
CBX1-201ENST00000225603 WDR73Q6P4I2 378 aa13.72□□□□□ -0.21
CBX1-201ENST00000225603 S100A7AQ86SG5 101 aa13.72□□□□□ -0.21
CBX1-201ENST00000225603 WFDC12Q8WWY7 111 aa13.72□□□□□ -0.21
CBX1-201ENST00000225603 SMIM12Q96EX1 92 aa13.72□□□□□ -0.21
CBX1-201ENST00000225603 TSSC4Q9Y5U2 329 aaPredicted RBP13.72□□□□□ -0.21
CBX1-201ENST00000225603 SELENOKQ9Y6D0 94 aa13.72□□□□□ -0.21
CBX1-201ENST00000225603 GRIFINA4D1Z8 144 aa13.72□□□□□ -0.21
CBX1-201ENST00000225603 ADARB2-AS1A8MUL3 147 aa13.72□□□□□ -0.21
CBX1-201ENST00000225603 LINC01619G3V211 115 aa13.72□□□□□ -0.21
CBX1-201ENST00000225603 GATCO43716 136 aaKnown RBP13.72□□□□□ -0.21
CBX1-201ENST00000225603 CTAG1AP78358 180 aa13.72□□□□□ -0.21
CBX1-201ENST00000225603 NUDT10Q8NFP7 164 aa13.72□□□□□ -0.21
CBX1-201ENST00000225603 NUDT11Q96G61 164 aa13.72□□□□□ -0.21
CBX1-201ENST00000225603 FMC1Q96HJ9 113 aa13.72□□□□□ -0.21
CBX1-201ENST00000225603 RAX2Q96IS3 184 aa13.72□□□□□ -0.21
CBX1-201ENST00000225603 OTORQ9NRC9 128 aa13.72□□□□□ -0.21
CBX1-201ENST00000225603 MT-ND6P03923 174 aa13.71□□□□□ -0.21
CBX1-201ENST00000225603 TCRAP04437 139 aa13.71□□□□□ -0.21
CBX1-201ENST00000225603 KLF5Q13887 457 aaPredicted RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms