RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 ZNF253O75346 499 aa9.16□□□□□ -0.94
LSM5-201ENST00000223084 MIFP14174 115 aa9.16□□□□□ -0.94
LSM5-201ENST00000223084 ATP6V0CP27449 155 aa9.16□□□□□ -0.94
LSM5-201ENST00000223084 ZNF266Q14584 549 aa9.16□□□□□ -0.94
LSM5-201ENST00000223084 ACOT6Q3I5F7 207 aaPredicted RBP9.16□□□□□ -0.94
LSM5-201ENST00000223084 ZNF705AQ6ZN79 300 aaPredicted RBP9.16□□□□□ -0.94
LSM5-201ENST00000223084 C1orf158Q8N1D5 194 aa9.16□□□□□ -0.94
LSM5-201ENST00000223084 EXOC3-AS1Q8N2X6 119 aa9.16□□□□□ -0.94
LSM5-201ENST00000223084 FXYD5Q96DB9 178 aa9.16□□□□□ -0.94
LSM5-201ENST00000223084 PPP1R14DQ9NXH3 145 aa9.16□□□□□ -0.94
LSM5-201ENST00000223084 CSMD3Q7Z407 3707 aa9.16□□□□□ -0.94
LSM5-201ENST00000223084 hCG_2014768A0A024R1R8 64 aa9.15□□□□□ -0.94
LSM5-201ENST00000223084 A0A1B0GVG6 124 aa9.15□□□□□ -0.94
LSM5-201ENST00000223084 ARPC5O15511 151 aa9.15□□□□□ -0.94
LSM5-201ENST00000223084 CRXO43186 299 aaPredicted RBP9.15□□□□□ -0.94
LSM5-201ENST00000223084 OR7C2O60412 319 aa9.15□□□□□ -0.94
LSM5-201ENST00000223084 NBEAP1P0C6P0 100 aa9.15□□□□□ -0.94
LSM5-201ENST00000223084 M6PRP20645 277 aa9.15□□□□□ -0.94
LSM5-201ENST00000223084 NANOS2P60321 138 aaKnown RBP9.15□□□□□ -0.94
LSM5-201ENST00000223084 RPL7L1Q6DKI1 246 aaKnown RBP9.15□□□□□ -0.94
LSM5-201ENST00000223084 FAM122CQ6P4D5 195 aa9.15□□□□□ -0.94
LSM5-201ENST00000223084 BAP18Q8IXM2 172 aa9.15□□□□□ -0.94
LSM5-201ENST00000223084 RNF141Q8WVD5 230 aa9.15□□□□□ -0.94
LSM5-201ENST00000223084 SH3BGRL3Q9H299 93 aa9.15□□□□□ -0.94
LSM5-201ENST00000223084 TENM2Q9NT68 2774 aa9.14□□□□□ -0.95
LSM5-201ENST00000223084 BOLA2-SMG1P6H3BVE0 249 aa9.14□□□□□ -0.95
LSM5-201ENST00000223084 PRM2P04554 102 aa9.14□□□□□ -0.95
LSM5-201ENST00000223084 PDE6HQ13956 83 aa9.14□□□□□ -0.95
LSM5-201ENST00000223084 ICAM4Q14773 271 aa9.14□□□□□ -0.95
LSM5-201ENST00000223084 OR10G4Q8NGN3 311 aa9.14□□□□□ -0.95
LSM5-201ENST00000223084 OR10G9Q8NGN4 311 aa9.14□□□□□ -0.95
LSM5-201ENST00000223084 OR10G7Q8NGN6 311 aa9.14□□□□□ -0.95
LSM5-201ENST00000223084 OR10J6PQ8NGY7 276 aa9.14□□□□□ -0.95
LSM5-201ENST00000223084 C11orf45Q8TAV5 145 aa9.14□□□□□ -0.95
LSM5-201ENST00000223084 PHYHIPLQ96FC7 376 aa9.14□□□□□ -0.95
LSM5-201ENST00000223084 IGF2BP2-AS1Q96M15 143 aa9.14□□□□□ -0.95
LSM5-201ENST00000223084 GOLT1BQ9Y3E0 138 aa9.14□□□□□ -0.95
LSM5-201ENST00000223084 BIRC6Q9NR09 4857 aa9.13□□□□□ -0.95
LSM5-201ENST00000223084 A0A1W2PPV4 95 aa9.13□□□□□ -0.95
LSM5-201ENST00000223084 HMGB3O15347 200 aaKnown RBP9.13□□□□□ -0.95
LSM5-201ENST00000223084 AMBPP02760 352 aa9.13□□□□□ -0.95
LSM5-201ENST00000223084 TAS2R45P59539 299 aa9.13□□□□□ -0.95
LSM5-201ENST00000223084 UBE2L3P68036 154 aaKnown RBP9.13□□□□□ -0.95
LSM5-201ENST00000223084 ERCC8Q13216 396 aa9.13□□□□□ -0.95
LSM5-201ENST00000223084 KIR3DS1Q14943 382 aa9.13□□□□□ -0.95
LSM5-201ENST00000223084 KHDC3LQ587J8 217 aa9.13□□□□□ -0.95
LSM5-201ENST00000223084 OR11H4Q8NGC9 324 aa9.13□□□□□ -0.95
LSM5-201ENST00000223084 OR2G3Q8NGZ4 309 aa9.13□□□□□ -0.95
LSM5-201ENST00000223084 MRPL53Q96EL3 112 aaKnown RBP9.13□□□□□ -0.95
LSM5-201ENST00000223084 NEU1Q99519 415 aa9.13□□□□□ -0.95
LSM5-201ENST00000223084 PSMG3Q9BT73 122 aaPredicted RBP9.13□□□□□ -0.95
LSM5-201ENST00000223084 CELA1Q9UNI1 258 aa9.13□□□□□ -0.95
LSM5-201ENST00000223084 DYNC2H1Q8NCM8 4307 aaKnown RBP9.12□□□□□ -0.95
LSM5-201ENST00000223084 BORCS7-ASMTA0A0B4J1R7 106 aa9.12□□□□□ -0.95
LSM5-201ENST00000223084 J3KRW8 73 aa9.12□□□□□ -0.95
LSM5-201ENST00000223084 INSP01308 110 aa9.12□□□□□ -0.95
LSM5-201ENST00000223084 CT45A10P0DMU9 189 aa9.12□□□□□ -0.95
LSM5-201ENST00000223084 EMP1P54849 157 aa9.12□□□□□ -0.95
LSM5-201ENST00000223084 RANP62826 216 aaKnown RBP9.12□□□□□ -0.95
LSM5-201ENST00000223084 RPP25LQ8N5L8 163 aaKnown RBP9.12□□□□□ -0.95
LSM5-201ENST00000223084 PHLDA1Q8WV24 401 aaPredicted RBP9.12□□□□□ -0.95
LSM5-201ENST00000223084 TMEM208Q9BTX3 173 aa9.12□□□□□ -0.95
LSM5-201ENST00000223084 AAMDCQ9H7C9 122 aa9.12□□□□□ -0.95
LSM5-201ENST00000223084 PRELID1Q9Y255 219 aa9.12□□□□□ -0.95
LSM5-201ENST00000223084 IGKV2-40A0A087WW87 121 aaPredicted RBP9.11□□□□□ -0.95
LSM5-201ENST00000223084 SMIM9A6NGZ8 99 aa9.11□□□□□ -0.95
LSM5-201ENST00000223084 ZNF705GA8MUZ8 300 aaPredicted RBP9.11□□□□□ -0.95
LSM5-201ENST00000223084 NPIPB6E9PJ23 425 aa9.11□□□□□ -0.95
LSM5-201ENST00000223084 IGKV2D-40P01614 121 aaPredicted RBP9.11□□□□□ -0.95
LSM5-201ENST00000223084 HBE1P02100 147 aa9.11□□□□□ -0.95
LSM5-201ENST00000223084 CDKN1BP46527 198 aa9.11□□□□□ -0.95
LSM5-201ENST00000223084 CDC34P49427 236 aaPredicted RBP9.11□□□□□ -0.95
LSM5-201ENST00000223084 CEMP1Q6PRD7 247 aaPredicted RBP9.11□□□□□ -0.95
LSM5-201ENST00000223084 ZNF767PQ75MW2 155 aa9.11□□□□□ -0.95
LSM5-201ENST00000223084 AKAP14Q86UN6 197 aa9.11□□□□□ -0.95
LSM5-201ENST00000223084 TCTE3Q8IZS6 198 aa9.11□□□□□ -0.95
LSM5-201ENST00000223084 ST6GAL2Q96JF0 529 aa9.11□□□□□ -0.95
LSM5-201ENST00000223084 CYTL1Q9NRR1 136 aa9.11□□□□□ -0.95
LSM5-201ENST00000223084 ARL14EPLP0DKL9 152 aa9.1□□□□□ -0.95
LSM5-201ENST00000223084 SERF2P84101 59 aa9.1□□□□□ -0.95
LSM5-201ENST00000223084 RAB24Q969Q5 203 aa9.1□□□□□ -0.95
LSM5-201ENST00000223084 LINC01587Q99440 93 aa9.1□□□□□ -0.95
LSM5-201ENST00000223084 VGLL1Q99990 258 aa9.1□□□□□ -0.95
LSM5-201ENST00000223084 AGPAT4-IT1Q9H0P7 198 aa9.1□□□□□ -0.95
LSM5-201ENST00000223084 Q9H3A6 140 aa9.1□□□□□ -0.95
LSM5-201ENST00000223084 LOC102723971A0A1B0GUV8 181 aa9.09□□□□□ -0.95
LSM5-201ENST00000223084 NUPR2A6NF83 97 aa9.09□□□□□ -0.95
LSM5-201ENST00000223084 TAAR5O14804 337 aa9.09□□□□□ -0.95
LSM5-201ENST00000223084 AZU1P20160 251 aa9.09□□□□□ -0.95
LSM5-201ENST00000223084 RRN3P1Q2M238 152 aa9.09□□□□□ -0.95
LSM5-201ENST00000223084 GFI1BQ5VTD9 330 aa9.09□□□□□ -0.95
LSM5-201ENST00000223084 PQLC2Q6ZP29 291 aa9.09□□□□□ -0.95
LSM5-201ENST00000223084 SSX7Q7RTT5 188 aa9.09□□□□□ -0.95
LSM5-201ENST00000223084 KCNRGQ8N5I3 272 aa9.09□□□□□ -0.95
LSM5-201ENST00000223084 GNPNAT1Q96EK6 184 aaPredicted RBP9.09□□□□□ -0.95
LSM5-201ENST00000223084 PLECQ15149 4684 aaKnown RBP9.08□□□□□ -0.96
LSM5-201ENST00000223084 JTBO76095 146 aa9.08□□□□□ -0.96
LSM5-201ENST00000223084 MBP02144 154 aa9.08□□□□□ -0.96
LSM5-201ENST00000223084 STAG3L2P0CL84 134 aa9.08□□□□□ -0.96
LSM5-201ENST00000223084 STAG3L3P0CL85 134 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms