RNA–Protein interactions for RNA: ENST00000187762.6

TMEM38A-201, Transcript of transmembrane protein 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM38A, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-201ENST00000187762 NHLRC4P0CG21 123 aaPredicted RBP11.76□□□□□ -0.53
TMEM38A-201ENST00000187762 ODF1Q14990 250 aa11.76□□□□□ -0.53
TMEM38A-201ENST00000187762 TAL2Q16559 108 aa11.76□□□□□ -0.53
TMEM38A-201ENST00000187762 C22orf34Q6ZV56 151 aa11.76□□□□□ -0.53
TMEM38A-201ENST00000187762 GTSCR1Q86UQ5 136 aa11.76□□□□□ -0.53
TMEM38A-201ENST00000187762 FLYWCH2Q96CP2 140 aaKnown RBP11.76□□□□□ -0.53
TMEM38A-201ENST00000187762 CGB3P0DN86 165 aa11.75□□□□□ -0.53
TMEM38A-201ENST00000187762 CGB7P0DN87 165 aa11.75□□□□□ -0.53
TMEM38A-201ENST00000187762 ZNF493Q6ZR52 646 aa11.75□□□□□ -0.53
TMEM38A-201ENST00000187762 TPPP3Q9BW30 176 aa11.75□□□□□ -0.53
TMEM38A-201ENST00000187762 Q9H3A6 140 aa11.75□□□□□ -0.53
TMEM38A-201ENST00000187762 FAM215AQ9Y5M1 114 aa11.75□□□□□ -0.53
TMEM38A-201ENST00000187762 RBP4P02753 201 aa11.75□□□□□ -0.53
TMEM38A-201ENST00000187762 KLF17Q5JT82 389 aaPredicted RBP11.75□□□□□ -0.53
TMEM38A-201ENST00000187762 PRNTQ86SH4 94 aa11.75□□□□□ -0.53
TMEM38A-201ENST00000187762 ORMDL3Q8N138 153 aa11.75□□□□□ -0.53
TMEM38A-201ENST00000187762 RBMXL3Q8N7X1 1067 aaKnown RBP11.75□□□□□ -0.53
TMEM38A-201ENST00000187762 NPIPB3Q92617 1050 aa11.75□□□□□ -0.53
TMEM38A-201ENST00000187762 CEP250Q9BV73 2442 aa11.74□□□□□ -0.53
TMEM38A-201ENST00000187762 IGKV1D-37A0A075B6S9 117 aa11.74□□□□□ -0.53
TMEM38A-201ENST00000187762 ZNF785A8K8V0 405 aa11.74□□□□□ -0.53
TMEM38A-201ENST00000187762 TEX29Q8N6K0 151 aa11.74□□□□□ -0.53
TMEM38A-201ENST00000187762 SRSF8Q9BRL6 282 aaKnown RBP11.74□□□□□ -0.53
TMEM38A-201ENST00000187762 IGHV3-48P01763 117 aa11.74□□□□□ -0.53
TMEM38A-201ENST00000187762 EVI2AP22794 236 aa11.74□□□□□ -0.53
TMEM38A-201ENST00000187762 GLRXP35754 106 aa11.74□□□□□ -0.53
TMEM38A-201ENST00000187762 AMN1Q8IY45 258 aa11.74□□□□□ -0.53
TMEM38A-201ENST00000187762 FAM216BQ8N7L0 139 aa11.74□□□□□ -0.53
TMEM38A-201ENST00000187762 TNFRSF18Q9Y5U5 241 aa11.74□□□□□ -0.53
TMEM38A-201ENST00000187762 IGKCP01834 107 aa11.73□□□□□ -0.53
TMEM38A-201ENST00000187762 HLA-DRB4P13762 266 aa11.73□□□□□ -0.53
TMEM38A-201ENST00000187762 CARD19Q96LW7 228 aa11.73□□□□□ -0.53
TMEM38A-201ENST00000187762 CCL13Q99616 98 aa11.73□□□□□ -0.53
TMEM38A-201ENST00000187762 HLA-DRB4X5D2U9 266 aa11.73□□□□□ -0.53
TMEM38A-201ENST00000187762 ARFGEF3Q5TH69 2177 aa11.73□□□□□ -0.53
TMEM38A-201ENST00000187762 ORM2P19652 201 aa11.73□□□□□ -0.53
TMEM38A-201ENST00000187762 FAM104BQ5XKR9 115 aa11.73□□□□□ -0.53
TMEM38A-201ENST00000187762 MAPKAPK5-AS1Q8N8E1 139 aa11.73□□□□□ -0.53
TMEM38A-201ENST00000187762 IGLV2-11P01706 119 aa11.73□□□□□ -0.53
TMEM38A-201ENST00000187762 CLEC3BP05452 202 aa11.73□□□□□ -0.53
TMEM38A-201ENST00000187762 ZC2HC1BQ5TFG8 222 aa11.73□□□□□ -0.53
TMEM38A-201ENST00000187762 PPDPFLQ8WWR9 84 aa11.73□□□□□ -0.53
TMEM38A-201ENST00000187762 HIST1H4GQ99525 98 aa11.73□□□□□ -0.53
TMEM38A-201ENST00000187762 HIF1ANQ9NWT6 349 aa11.73□□□□□ -0.53
TMEM38A-201ENST00000187762 FCER1GP30273 86 aa11.72□□□□□ -0.53
TMEM38A-201ENST00000187762 MORN3Q6PF18 240 aaPredicted RBP11.72□□□□□ -0.53
TMEM38A-201ENST00000187762 OR10X1Q8NGY0 326 aa11.72□□□□□ -0.53
TMEM38A-201ENST00000187762 IGLV3-9A0A075B6K5 115 aa11.72□□□□□ -0.53
TMEM38A-201ENST00000187762 K7EM74 188 aa11.72□□□□□ -0.53
TMEM38A-201ENST00000187762 IGHV1-46P01743 117 aa11.72□□□□□ -0.53
TMEM38A-201ENST00000187762 TNFAIP6P98066 277 aaPredicted RBP11.72□□□□□ -0.53
TMEM38A-201ENST00000187762 FAM27E3Q08E93 113 aa11.72□□□□□ -0.53
TMEM38A-201ENST00000187762 DLX4Q92988 240 aaPredicted RBP11.72□□□□□ -0.53
TMEM38A-201ENST00000187762 PTH2Q96A98 100 aa11.72□□□□□ -0.53
TMEM38A-201ENST00000187762 GAFA1Q96PS6 74 aa11.72□□□□□ -0.53
TMEM38A-201ENST00000187762 RNF7Q9UBF6 113 aa11.72□□□□□ -0.53
TMEM38A-201ENST00000187762 MAP1BP46821 2468 aaKnown RBP11.72□□□□□ -0.53
TMEM38A-201ENST00000187762 AGRNO00468 2067 aa11.71□□□□□ -0.53
TMEM38A-201ENST00000187762 ROS1P08922 2347 aa11.71□□□□□ -0.53
TMEM38A-201ENST00000187762 TMEM213A2RRL7 107 aa11.71□□□□□ -0.53
TMEM38A-201ENST00000187762 IGKV1-16P04430 117 aa11.71□□□□□ -0.53
TMEM38A-201ENST00000187762 GP9P14770 177 aa11.71□□□□□ -0.53
TMEM38A-201ENST00000187762 MRPL51Q4U2R6 128 aaKnown RBP11.71□□□□□ -0.53
TMEM38A-201ENST00000187762 GOLT1AQ6ZVE7 132 aa11.71□□□□□ -0.53
TMEM38A-201ENST00000187762 MRPL36Q9P0J6 103 aaKnown RBP11.71□□□□□ -0.53
TMEM38A-201ENST00000187762 AKAP13Q12802 2813 aa11.71□□□□□ -0.53
TMEM38A-201ENST00000187762 DCHS1Q96JQ0 3298 aa11.71□□□□□ -0.54
TMEM38A-201ENST00000187762 CEACAM4O75871 244 aa11.71□□□□□ -0.54
TMEM38A-201ENST00000187762 NPYP01303 97 aa11.71□□□□□ -0.54
TMEM38A-201ENST00000187762 THBDP07204 575 aa11.71□□□□□ -0.54
TMEM38A-201ENST00000187762 ANXA2RQ3ZCQ2 193 aa11.71□□□□□ -0.54
TMEM38A-201ENST00000187762 THAP8Q8NA92 274 aa11.71□□□□□ -0.54
TMEM38A-201ENST00000187762 TMEM158Q8WZ71 300 aa11.71□□□□□ -0.54
TMEM38A-201ENST00000187762 CITED1Q99966 193 aa11.71□□□□□ -0.54
TMEM38A-201ENST00000187762 SMKR1H3BMG3 65 aa11.7□□□□□ -0.54
TMEM38A-201ENST00000187762 DIAPH2-AS1Q14236 149 aa11.7□□□□□ -0.54
TMEM38A-201ENST00000187762 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.7□□□□□ -0.54
TMEM38A-201ENST00000187762 RAX2Q96IS3 184 aa11.7□□□□□ -0.54
TMEM38A-201ENST00000187762 HARBI1Q96MB7 349 aa11.7□□□□□ -0.54
TMEM38A-201ENST00000187762 TMEM133Q9H2Q1 129 aa11.7□□□□□ -0.54
TMEM38A-201ENST00000187762 VCX2Q9H322 139 aa11.7□□□□□ -0.54
TMEM38A-201ENST00000187762 TRBV7-3A0A075B6L6 115 aa11.7□□□□□ -0.54
TMEM38A-201ENST00000187762 GAGE12JA6NER3 117 aa11.7□□□□□ -0.54
TMEM38A-201ENST00000187762 CCDC179H3BU77 68 aa11.7□□□□□ -0.54
TMEM38A-201ENST00000187762 GAGE7O76087 117 aa11.7□□□□□ -0.54
TMEM38A-201ENST00000187762 DPM2O94777 84 aa11.7□□□□□ -0.54
TMEM38A-201ENST00000187762 PRSS1P07477 247 aa11.7□□□□□ -0.54
TMEM38A-201ENST00000187762 GAGE12FP0CL80 117 aa11.7□□□□□ -0.54
TMEM38A-201ENST00000187762 GAGE12GP0CL81 117 aa11.7□□□□□ -0.54
TMEM38A-201ENST00000187762 GAGE12IP0CL82 117 aa11.7□□□□□ -0.54
TMEM38A-201ENST00000187762 ERHP84090 104 aaKnown RBP11.7□□□□□ -0.54
TMEM38A-201ENST00000187762 GAGE4Q13068 117 aa11.7□□□□□ -0.54
TMEM38A-201ENST00000187762 BSNQ9UPA5 3926 aa11.69□□□□□ -0.54
TMEM38A-201ENST00000187762 ZCCHC24Q8N2G6 241 aaKnown RBP11.69□□□□□ -0.54
TMEM38A-201ENST00000187762 ASCL2Q99929 193 aa11.69□□□□□ -0.54
TMEM38A-201ENST00000187762 ATMQ13315 3056 aa11.69□□□□□ -0.54
TMEM38A-201ENST00000187762 SAA1P0DJI8 122 aaPredicted RBP11.69□□□□□ -0.54
TMEM38A-201ENST00000187762 GATA4P43694 442 aa11.69□□□□□ -0.54
TMEM38A-201ENST00000187762 TEN1Q86WV5 123 aa11.69□□□□□ -0.54
TMEM38A-201ENST00000187762 FOXC2Q99958 501 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms