RNA–Protein interactions for RNA: ENST00000175091.4

LAPTM4A-201, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4A, Length 1,765 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-201ENST00000175091 SMR3AQ99954 134 aa11.91□□□□□ -0.5
LAPTM4A-201ENST00000175091 ZNF492Q9P255 531 aa11.91□□□□□ -0.5
LAPTM4A-201ENST00000175091 PSG8Q9UQ74 426 aa11.91□□□□□ -0.5
LAPTM4A-201ENST00000175091 IGHV7-4-1A0A0J9YVY3 117 aa11.9□□□□□ -0.5
LAPTM4A-201ENST00000175091 A0A1W2PS18 150 aa11.9□□□□□ -0.5
LAPTM4A-201ENST00000175091 K7EMT4 169 aa11.9□□□□□ -0.5
LAPTM4A-201ENST00000175091 RPEL1Q2QD12 228 aa11.9□□□□□ -0.5
LAPTM4A-201ENST00000175091 IGFL4Q6B9Z1 124 aa11.9□□□□□ -0.5
LAPTM4A-201ENST00000175091 GRAMD2BQ96HH9 432 aa11.9□□□□□ -0.5
LAPTM4A-201ENST00000175091 IGKV2-40A0A087WW87 121 aaPredicted RBP11.9□□□□□ -0.51
LAPTM4A-201ENST00000175091 TRAV8-2A0A0B4J237 113 aa11.9□□□□□ -0.51
LAPTM4A-201ENST00000175091 IGKV2D-40P01614 121 aaPredicted RBP11.9□□□□□ -0.51
LAPTM4A-201ENST00000175091 RNASE1P07998 156 aaKnown RBP11.9□□□□□ -0.51
LAPTM4A-201ENST00000175091 PRB4P10163 310 aaPredicted RBP11.9□□□□□ -0.51
LAPTM4A-201ENST00000175091 FAM106AQ4KMX7 169 aa11.9□□□□□ -0.51
LAPTM4A-201ENST00000175091 TM4SF20Q53R12 229 aa11.9□□□□□ -0.51
LAPTM4A-201ENST00000175091 NUDT10Q8NFP7 164 aa11.9□□□□□ -0.51
LAPTM4A-201ENST00000175091 NUDT11Q96G61 164 aa11.9□□□□□ -0.51
LAPTM4A-201ENST00000175091 BIN3Q9NQY0 253 aa11.9□□□□□ -0.51
LAPTM4A-201ENST00000175091 ZFP30Q9Y2G7 519 aa11.9□□□□□ -0.51
LAPTM4A-201ENST00000175091 C19orf71A6NCJ1 209 aa11.89□□□□□ -0.51
LAPTM4A-201ENST00000175091 FBLL1A6NHQ2 334 aaKnown RBP11.89□□□□□ -0.51
LAPTM4A-201ENST00000175091 ZNF705GA8MUZ8 300 aaPredicted RBP11.89□□□□□ -0.51
LAPTM4A-201ENST00000175091 PHOX2AO14813 284 aa11.89□□□□□ -0.51
LAPTM4A-201ENST00000175091 TRGC2P03986 189 aa11.89□□□□□ -0.51
LAPTM4A-201ENST00000175091 LINC00322Q6ZN03 302 aaPredicted RBP11.89□□□□□ -0.51
LAPTM4A-201ENST00000175091 MRPL53Q96EL3 112 aaKnown RBP11.89□□□□□ -0.51
LAPTM4A-201ENST00000175091 HIVEP2P31629 2446 aa11.89□□□□□ -0.51
LAPTM4A-201ENST00000175091 IGHV4OR15-8A0A075B7B6 117 aa11.88□□□□□ -0.51
LAPTM4A-201ENST00000175091 A0A087WW49 117 aa11.88□□□□□ -0.51
LAPTM4A-201ENST00000175091 A8MWP6 167 aa11.88□□□□□ -0.51
LAPTM4A-201ENST00000175091 SRD5A1P18405 259 aa11.88□□□□□ -0.51
LAPTM4A-201ENST00000175091 LCN12Q6JVE5 192 aa11.88□□□□□ -0.51
LAPTM4A-201ENST00000175091 REC114Q7Z4M0 266 aa11.88□□□□□ -0.51
LAPTM4A-201ENST00000175091 RNF182Q8N6D2 247 aa11.88□□□□□ -0.51
LAPTM4A-201ENST00000175091 UFC1Q9Y3C8 167 aa11.88□□□□□ -0.51
LAPTM4A-201ENST00000175091 SMIM27A0A1W2PRY6 76 aa11.87□□□□□ -0.51
LAPTM4A-201ENST00000175091 ZNF705FA8MVS1 300 aaPredicted RBP11.87□□□□□ -0.51
LAPTM4A-201ENST00000175091 GATCO43716 136 aaKnown RBP11.87□□□□□ -0.51
LAPTM4A-201ENST00000175091 CA1P00915 261 aaPredicted RBP11.87□□□□□ -0.51
LAPTM4A-201ENST00000175091 WIPF2Q8TF74 440 aaPredicted RBP11.87□□□□□ -0.51
LAPTM4A-201ENST00000175091 ZC2HC1AQ96GY0 325 aa11.87□□□□□ -0.51
LAPTM4A-201ENST00000175091 RHPN1-AS1Q9BWJ2 59 aa11.87□□□□□ -0.51
LAPTM4A-201ENST00000175091 SMPXQ9UHP9 88 aa11.87□□□□□ -0.51
LAPTM4A-201ENST00000175091 TMEM213A2RRL7 107 aa11.87□□□□□ -0.51
LAPTM4A-201ENST00000175091 NPIPB6E9PJ23 425 aa11.87□□□□□ -0.51
LAPTM4A-201ENST00000175091 SOCS3O14543 225 aa11.87□□□□□ -0.51
LAPTM4A-201ENST00000175091 LY6G6DO95868 133 aa11.87□□□□□ -0.51
LAPTM4A-201ENST00000175091 HILS1P60008 231 aa11.87□□□□□ -0.51
LAPTM4A-201ENST00000175091 TCTEX1D4Q5JR98 221 aa11.87□□□□□ -0.51
LAPTM4A-201ENST00000175091 GBGT1Q8N5D6 347 aa11.87□□□□□ -0.51
LAPTM4A-201ENST00000175091 CLEC5AQ9NY25 188 aa11.87□□□□□ -0.51
LAPTM4A-201ENST00000175091 RBAKDNA6NC62 111 aa11.86□□□□□ -0.51
LAPTM4A-201ENST00000175091 LGALS9O00182 355 aa11.86□□□□□ -0.51
LAPTM4A-201ENST00000175091 EDN2P20800 178 aa11.86□□□□□ -0.51
LAPTM4A-201ENST00000175091 CDX1P47902 265 aaPredicted RBP11.86□□□□□ -0.51
LAPTM4A-201ENST00000175091 CT83Q5H943 113 aa11.86□□□□□ -0.51
LAPTM4A-201ENST00000175091 COX8CQ7Z4L0 72 aa11.86□□□□□ -0.51
LAPTM4A-201ENST00000175091 ZNF418Q8TF45 676 aaPredicted RBP11.86□□□□□ -0.51
LAPTM4A-201ENST00000175091 ASCL2Q99929 193 aa11.86□□□□□ -0.51
LAPTM4A-201ENST00000175091 RPP21Q9H633 154 aaKnown RBP11.86□□□□□ -0.51
LAPTM4A-201ENST00000175091 NSD1Q96L73 2696 aaPredicted RBP11.86□□□□□ -0.51
LAPTM4A-201ENST00000175091 PRAC2D3DTV9 90 aa11.85□□□□□ -0.51
LAPTM4A-201ENST00000175091 HOXD3P31249 432 aaPredicted RBP11.85□□□□□ -0.51
LAPTM4A-201ENST00000175091 ACTL10Q5JWF8 245 aa11.85□□□□□ -0.51
LAPTM4A-201ENST00000175091 VGLL1Q99990 258 aa11.85□□□□□ -0.51
LAPTM4A-201ENST00000175091 NRN1Q9NPD7 142 aa11.85□□□□□ -0.51
LAPTM4A-201ENST00000175091 HIST1H2BKO60814 126 aa11.84□□□□□ -0.51
LAPTM4A-201ENST00000175091 P01737 135 aa11.84□□□□□ -0.51
LAPTM4A-201ENST00000175091 HIST1H2BJP06899 126 aa11.84□□□□□ -0.51
LAPTM4A-201ENST00000175091 HIST1H2BOP23527 126 aa11.84□□□□□ -0.51
LAPTM4A-201ENST00000175091 HIST1H2BBP33778 126 aa11.84□□□□□ -0.51
LAPTM4A-201ENST00000175091 TCL1AP56279 114 aa11.84□□□□□ -0.51
LAPTM4A-201ENST00000175091 HIST1H2BDP58876 126 aa11.84□□□□□ -0.51
LAPTM4A-201ENST00000175091 HIST1H2BCP62807 126 aa11.84□□□□□ -0.51
LAPTM4A-201ENST00000175091 HIST2H2BEQ16778 126 aa11.84□□□□□ -0.51
LAPTM4A-201ENST00000175091 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.84□□□□□ -0.51
LAPTM4A-201ENST00000175091 C18orf65Q6ZTR6 163 aa11.84□□□□□ -0.51
LAPTM4A-201ENST00000175091 Q8TAT8 98 aa11.84□□□□□ -0.51
LAPTM4A-201ENST00000175091 TSKUQ8WUA8 353 aa11.84□□□□□ -0.51
LAPTM4A-201ENST00000175091 C4orf3Q8WVX3 66 aa11.84□□□□□ -0.51
LAPTM4A-201ENST00000175091 FRZBQ92765 325 aa11.84□□□□□ -0.51
LAPTM4A-201ENST00000175091 HIST1H2BHQ93079 126 aa11.84□□□□□ -0.51
LAPTM4A-201ENST00000175091 C16orf92Q96LL3 132 aa11.84□□□□□ -0.51
LAPTM4A-201ENST00000175091 PRR25Q96S07 402 aa11.84□□□□□ -0.51
LAPTM4A-201ENST00000175091 HIST1H2BNQ99877 126 aa11.84□□□□□ -0.51
LAPTM4A-201ENST00000175091 HIST1H2BMQ99879 126 aa11.84□□□□□ -0.51
LAPTM4A-201ENST00000175091 C8orf49Q96NF6 230 aa11.84□□□□□ -0.51
LAPTM4A-201ENST00000175091 BMI1P35226 326 aa11.83□□□□□ -0.52
LAPTM4A-201ENST00000175091 SYNJ2BPP57105 145 aa11.83□□□□□ -0.52
LAPTM4A-201ENST00000175091 SAPCD1Q5SSQ6 148 aa11.83□□□□□ -0.52
LAPTM4A-201ENST00000175091 OR4B1Q8NGF8 309 aa11.83□□□□□ -0.52
LAPTM4A-201ENST00000175091 DAZAP1Q96EP5 407 aaKnown RBP11.83□□□□□ -0.52
LAPTM4A-201ENST00000175091 C16orf95Q9H693 158 aa11.83□□□□□ -0.52
LAPTM4A-201ENST00000175091 TRGC1P0CF51 173 aa11.82□□□□□ -0.52
LAPTM4A-201ENST00000175091 CT45A10P0DMU9 189 aa11.82□□□□□ -0.52
LAPTM4A-201ENST00000175091 CRIP1P50238 77 aa11.82□□□□□ -0.52
LAPTM4A-201ENST00000175091 DEFB136Q30KP8 78 aa11.82□□□□□ -0.52
LAPTM4A-201ENST00000175091 C20orf173Q96LM9 149 aa11.82□□□□□ -0.52
LAPTM4A-201ENST00000175091 NEU1Q99519 415 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 269.5 ms