RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 HrasQ61411 189 aa13.68□□□□□ -0.22
Shh-201ENSMUST00000002708 Vkorc1l1Q6TEK5 176 aa13.68□□□□□ -0.22
Shh-201ENSMUST00000002708 Dppa1Q810Y7 116 aa13.68□□□□□ -0.22
Shh-201ENSMUST00000002708 Lypd6Q8BPP5 171 aa13.68□□□□□ -0.22
Shh-201ENSMUST00000002708 Rln3Q8CHK2 141 aa13.68□□□□□ -0.22
Shh-201ENSMUST00000002708 H1fooQ8VIK3 304 aa13.68□□□□□ -0.22
Shh-201ENSMUST00000002708 Pnpla3Q91WW7 413 aa13.68□□□□□ -0.22
Shh-201ENSMUST00000002708 Opn3Q9WUK7 400 aa13.68□□□□□ -0.22
Shh-201ENSMUST00000002708 Shank1D3YZU1 2167 aa13.68□□□□□ -0.22
Shh-201ENSMUST00000002708 Frem1Q684R7 2191 aa13.68□□□□□ -0.22
Shh-201ENSMUST00000002708 Olfr1537P34983 314 aa13.68□□□□□ -0.22
Shh-201ENSMUST00000002708 Dpagt1P42867 410 aa13.68□□□□□ -0.22
Shh-201ENSMUST00000002708 Mob3bQ8VE04 216 aa13.68□□□□□ -0.22
Shh-201ENSMUST00000002708 Olfr344Q8VFP9 309 aa13.68□□□□□ -0.22
Shh-201ENSMUST00000002708 Myo15bI7HPW8 3033 aa13.68□□□□□ -0.22
Shh-201ENSMUST00000002708 KalrnA2CG49 2964 aa13.68□□□□□ -0.22
Shh-201ENSMUST00000002708 Zfp867E9Q2M4 473 aa13.68□□□□□ -0.22
Shh-201ENSMUST00000002708 Cd81P35762 236 aa13.68□□□□□ -0.22
Shh-201ENSMUST00000002708 Spink11Q09TK7 88 aa13.68□□□□□ -0.22
Shh-201ENSMUST00000002708 MaoaQ64133 526 aa13.68□□□□□ -0.22
Shh-201ENSMUST00000002708 Smim4Q8C1Q6 80 aa13.68□□□□□ -0.22
Shh-201ENSMUST00000002708 Pcgf1Q8R023 259 aaKnown RBP13.68□□□□□ -0.22
Shh-201ENSMUST00000002708 Herpud1Q9JJK5 391 aa13.68□□□□□ -0.22
Shh-201ENSMUST00000002708 Vsig2Q9Z109 328 aa13.68□□□□□ -0.22
Shh-201ENSMUST00000002708 Igkv6-15A0A140T8M5 115 aa13.67□□□□□ -0.22
Shh-201ENSMUST00000002708 P01804 111 aa13.67□□□□□ -0.22
Shh-201ENSMUST00000002708 Gnb1P62874 340 aa13.67□□□□□ -0.22
Shh-201ENSMUST00000002708 SeboxP70368 190 aa13.67□□□□□ -0.22
Shh-201ENSMUST00000002708 Megf9Q8BH27 600 aa13.67□□□□□ -0.22
Shh-201ENSMUST00000002708 Vmn1r70Q8R254 298 aa13.67□□□□□ -0.22
Shh-201ENSMUST00000002708 Pcnx1Q9QYC1 2344 aa13.67□□□□□ -0.22
Shh-201ENSMUST00000002708 Trav6n-7A0A075B6A6 116 aa13.67□□□□□ -0.22
Shh-201ENSMUST00000002708 Ighv5-2A0A0A6YVX8 117 aa13.67□□□□□ -0.22
Shh-201ENSMUST00000002708 Ighv1-18A0A0A6YXN4 117 aa13.67□□□□□ -0.22
Shh-201ENSMUST00000002708 Gm14443A2ARX0 610 aa13.67□□□□□ -0.22
Shh-201ENSMUST00000002708 Olfr1406E9Q8X1 310 aa13.67□□□□□ -0.22
Shh-201ENSMUST00000002708 P01790 122 aa13.67□□□□□ -0.22
Shh-201ENSMUST00000002708 Fcer1gP20491 86 aa13.67□□□□□ -0.22
Shh-201ENSMUST00000002708 Slc24a4Q8CGQ8 622 aa13.67□□□□□ -0.22
Shh-201ENSMUST00000002708 Tmem147Q9CQG6 224 aa13.67□□□□□ -0.22
Shh-201ENSMUST00000002708 Asxl3Q8C4A5 2259 aa13.66□□□□□ -0.22
Shh-201ENSMUST00000002708 Zfp334A2A4U6 679 aa13.66□□□□□ -0.22
Shh-201ENSMUST00000002708 Bet1lO35153 111 aa13.66□□□□□ -0.22
Shh-201ENSMUST00000002708 Tmem184aQ3UFJ6 425 aa13.66□□□□□ -0.22
Shh-201ENSMUST00000002708 Gm11232Q5SPI8 295 aa13.66□□□□□ -0.22
Shh-201ENSMUST00000002708 TpppQ7TQD2 218 aaKnown RBP13.66□□□□□ -0.22
Shh-201ENSMUST00000002708 Saxo2Q8BQB6 394 aa13.66□□□□□ -0.22
Shh-201ENSMUST00000002708 Vmn1r26Q8R2D7 339 aa13.66□□□□□ -0.22
Shh-201ENSMUST00000002708 Olfr1445Q8VFW9 314 aa13.66□□□□□ -0.22
Shh-201ENSMUST00000002708 Cysltr2Q920A1 309 aa13.66□□□□□ -0.22
Shh-201ENSMUST00000002708 Timm8a1Q9WVA2 97 aa13.66□□□□□ -0.22
Shh-201ENSMUST00000002708 Inafm1E9PV59 130 aa13.66□□□□□ -0.22
Shh-201ENSMUST00000002708 Agr2O88312 175 aa13.66□□□□□ -0.22
Shh-201ENSMUST00000002708 Gabra6P16305 453 aa13.66□□□□□ -0.22
Shh-201ENSMUST00000002708 CenptQ3TJM4 515 aa13.66□□□□□ -0.22
Shh-201ENSMUST00000002708 G430049J08RikQ3TL09 166 aa13.66□□□□□ -0.22
Shh-201ENSMUST00000002708 Psg22Q810J1 475 aa13.66□□□□□ -0.22
Shh-201ENSMUST00000002708 Bricd5Q8BV89 174 aa13.66□□□□□ -0.22
Shh-201ENSMUST00000002708 Olfr126Q8VGF0 319 aa13.66□□□□□ -0.22
Shh-201ENSMUST00000002708 Derl1Q99J56 251 aa13.66□□□□□ -0.22
Shh-201ENSMUST00000002708 Trav8n-2A0A075B633 112 aa13.65□□□□□ -0.22
Shh-201ENSMUST00000002708 Iglv3A0A0B4J1K5 122 aa13.65□□□□□ -0.22
Shh-201ENSMUST00000002708 Ucp1P12242 307 aa13.65□□□□□ -0.22
Shh-201ENSMUST00000002708 G6pcP35576 357 aa13.65□□□□□ -0.22
Shh-201ENSMUST00000002708 H2al1nQ497L1 109 aa13.65□□□□□ -0.22
Shh-201ENSMUST00000002708 Trdv4Q5R1A3 115 aa13.65□□□□□ -0.22
Shh-201ENSMUST00000002708 Adora3Q61618 319 aa13.65□□□□□ -0.22
Shh-201ENSMUST00000002708 Alkbh6Q8K2U2 238 aa13.65□□□□□ -0.22
Shh-201ENSMUST00000002708 Olfr354Q8VGJ8 317 aa13.65□□□□□ -0.22
Shh-201ENSMUST00000002708 Sfxn4Q925N1 313 aa13.65□□□□□ -0.22
Shh-201ENSMUST00000002708 CstadQ9D245 104 aa13.65□□□□□ -0.22
Shh-201ENSMUST00000002708 Coa3Q9D2R6 108 aa13.65□□□□□ -0.22
Shh-201ENSMUST00000002708 AcacaQ5SWU9 2345 aa13.65□□□□□ -0.22
Shh-201ENSMUST00000002708 Med12lQ8BQM9 2157 aa13.65□□□□□ -0.22
Shh-201ENSMUST00000002708 Olfr467L7N455 308 aa13.65□□□□□ -0.22
Shh-201ENSMUST00000002708 Rab24P35290 203 aa13.65□□□□□ -0.22
Shh-201ENSMUST00000002708 ApohQ01339 345 aa13.65□□□□□ -0.22
Shh-201ENSMUST00000002708 Taar9Q5QD04 348 aa13.65□□□□□ -0.22
Shh-201ENSMUST00000002708 Plk3Q60806 631 aa13.65□□□□□ -0.22
Shh-201ENSMUST00000002708 Olfr1383Q7TQT2 311 aa13.65□□□□□ -0.22
Shh-201ENSMUST00000002708 Msrb3Q8BU85 253 aa13.65□□□□□ -0.22
Shh-201ENSMUST00000002708 Klk13Q8CGR6 276 aa13.65□□□□□ -0.22
Shh-201ENSMUST00000002708 Olfr1339Q8VGB1 315 aa13.65□□□□□ -0.22
Shh-201ENSMUST00000002708 SmagpQ99KC7 97 aa13.65□□□□□ -0.22
Shh-201ENSMUST00000002708 Ms4a6cQ99N08 217 aa13.65□□□□□ -0.22
Shh-201ENSMUST00000002708 VsirQ9D659 308 aa13.65□□□□□ -0.22
Shh-201ENSMUST00000002708 Tex43Q9D9I1 141 aa13.65□□□□□ -0.22
Shh-201ENSMUST00000002708 Chst5Q9QUP4 395 aa13.65□□□□□ -0.22
Shh-201ENSMUST00000002708 Fhl3Q9R059 289 aa13.65□□□□□ -0.22
Shh-201ENSMUST00000002708 Gm12169F2Z474 250 aa13.64□□□□□ -0.23
Shh-201ENSMUST00000002708 Aqp7O54794 303 aa13.64□□□□□ -0.23
Shh-201ENSMUST00000002708 Gm20767O70517 169 aa13.64□□□□□ -0.23
Shh-201ENSMUST00000002708 Dynlt3P56387 116 aa13.64□□□□□ -0.23
Shh-201ENSMUST00000002708 Zfp386Q1WWJ5 626 aa13.64□□□□□ -0.23
Shh-201ENSMUST00000002708 MyocosQ3UWS6 143 aa13.64□□□□□ -0.23
Shh-201ENSMUST00000002708 PtafrQ62035 341 aa13.64□□□□□ -0.23
Shh-201ENSMUST00000002708 Sf3a2Q62203 475 aaKnown RBP13.64□□□□□ -0.23
Shh-201ENSMUST00000002708 Wdr82Q8BFQ4 313 aa13.64□□□□□ -0.23
Shh-201ENSMUST00000002708 5930422O12RikQ8C4Y4 123 aa13.64□□□□□ -0.23
Shh-201ENSMUST00000002708 Cdc34Q8CFI2 235 aa13.64□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 43.3 ms