RNA–Protein interactions for RNA: ENST00000640414.1

MECP2-226, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5 BASIC

Gene MECP2, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-226ENST00000640414 MIR17HGQ75NE6 70 aa8.49□□□□□ -1.05
MECP2-226ENST00000640414 SSX7Q7RTT5 188 aa8.49□□□□□ -1.05
MECP2-226ENST00000640414 LINC00305Q7Z4B0 112 aa8.49□□□□□ -1.05
MECP2-226ENST00000640414 FAM213BQ8TBF2 198 aa8.49□□□□□ -1.05
MECP2-226ENST00000640414 DYNLRB2Q8TF09 96 aa8.49□□□□□ -1.05
MECP2-226ENST00000640414 RNF141Q8WVD5 230 aa8.49□□□□□ -1.05
MECP2-226ENST00000640414 PCNPQ8WW12 178 aaKnown RBP8.49□□□□□ -1.05
MECP2-226ENST00000640414 TMEM190Q8WZ59 177 aa8.49□□□□□ -1.05
MECP2-226ENST00000640414 RAB24Q969Q5 203 aa8.49□□□□□ -1.05
MECP2-226ENST00000640414 UHRF2Q96PU4 802 aa8.49□□□□□ -1.05
MECP2-226ENST00000640414 PFDN5Q99471 154 aa8.49□□□□□ -1.05
MECP2-226ENST00000640414 ACTR3CQ9C0K3 210 aaPredicted RBP8.49□□□□□ -1.05
MECP2-226ENST00000640414 HIGD1AQ9Y241 93 aa8.49□□□□□ -1.05
MECP2-226ENST00000640414 A0A1W2PPV4 95 aa8.48□□□□□ -1.05
MECP2-226ENST00000640414 ZNF705EA8MWA4 302 aaPredicted RBP8.48□□□□□ -1.05
MECP2-226ENST00000640414 K7EMT4 169 aa8.48□□□□□ -1.05
MECP2-226ENST00000640414 HMGB3O15347 200 aaKnown RBP8.48□□□□□ -1.05
MECP2-226ENST00000640414 APOHP02749 345 aaPredicted RBP8.48□□□□□ -1.05
MECP2-226ENST00000640414 NPPCP23582 126 aa8.48□□□□□ -1.05
MECP2-226ENST00000640414 CRYBB3P26998 211 aa8.48□□□□□ -1.05
MECP2-226ENST00000640414 RHOBP62745 196 aa8.48□□□□□ -1.05
MECP2-226ENST00000640414 DPPA3Q6W0C5 159 aa8.48□□□□□ -1.05
MECP2-226ENST00000640414 ZNF575Q86XF7 245 aa8.48□□□□□ -1.05
MECP2-226ENST00000640414 MBD3L1Q8WWY6 194 aa8.48□□□□□ -1.05
MECP2-226ENST00000640414 RNF183Q96D59 192 aa8.48□□□□□ -1.05
MECP2-226ENST00000640414 SHANK2-AS3Q9BTD1 123 aa8.48□□□□□ -1.05
MECP2-226ENST00000640414 SLC25A39Q9BZJ4 359 aaPredicted RBP8.48□□□□□ -1.05
MECP2-226ENST00000640414 RABAC1Q9UI14 185 aa8.48□□□□□ -1.05
MECP2-226ENST00000640414 FUT9Q9Y231 359 aa8.48□□□□□ -1.05
MECP2-226ENST00000640414 U3KQE9 123 aa8.48□□□□□ -1.05
MECP2-226ENST00000640414 IGHV3OR16-13A0A075B7E8 117 aa8.47□□□□□ -1.05
MECP2-226ENST00000640414 IGHV3-49A0A0A0MS15 119 aa8.47□□□□□ -1.05
MECP2-226ENST00000640414 IGHV3-74A0A0B4J1X5 117 aa8.47□□□□□ -1.05
MECP2-226ENST00000640414 ZNF98A6NK75 572 aa8.47□□□□□ -1.05
MECP2-226ENST00000640414 LGALS9O00182 355 aa8.47□□□□□ -1.05
MECP2-226ENST00000640414 RGS13O14921 159 aa8.47□□□□□ -1.05
MECP2-226ENST00000640414 RTL8CO15255 209 aa8.47□□□□□ -1.05
MECP2-226ENST00000640414 NMBP08949 121 aa8.47□□□□□ -1.05
MECP2-226ENST00000640414 CDC34P49427 236 aaPredicted RBP8.47□□□□□ -1.05
MECP2-226ENST00000640414 LEMD1Q68G75 181 aa8.47□□□□□ -1.05
MECP2-226ENST00000640414 LCN15Q6UWW0 184 aa8.47□□□□□ -1.05
MECP2-226ENST00000640414 SFT2D1Q8WV19 159 aa8.47□□□□□ -1.05
MECP2-226ENST00000640414 SAT2Q96F10 170 aaPredicted RBP8.47□□□□□ -1.05
MECP2-226ENST00000640414 FAM167A-AS1Q96KT0 104 aa8.47□□□□□ -1.05
MECP2-226ENST00000640414 METTL26Q96S19 204 aa8.47□□□□□ -1.05
MECP2-226ENST00000640414 RNF2Q99496 336 aa8.47□□□□□ -1.05
MECP2-226ENST00000640414 SCRT1Q9BWW7 348 aa8.47□□□□□ -1.05
MECP2-226ENST00000640414 SLC25A22Q9H936 323 aa8.47□□□□□ -1.05
MECP2-226ENST00000640414 SELENOKQ9Y6D0 94 aa8.47□□□□□ -1.05
MECP2-226ENST00000640414 IGHV3-66A0A0C4DH42 116 aa8.46□□□□□ -1.06
MECP2-226ENST00000640414 CTXND1A0A1B0GTU2 59 aa8.46□□□□□ -1.06
MECP2-226ENST00000640414 TMEM213A2RRL7 107 aa8.46□□□□□ -1.06
MECP2-226ENST00000640414 H3BRN7 92 aa8.46□□□□□ -1.06
MECP2-226ENST00000640414 BUB3O43684 328 aa8.46□□□□□ -1.06
MECP2-226ENST00000640414 H2AFB1P0C5Y9 115 aa8.46□□□□□ -1.06
MECP2-226ENST00000640414 C8orf88P0DMB2 117 aa8.46□□□□□ -1.06
MECP2-226ENST00000640414 TCTAP57738 103 aa8.46□□□□□ -1.06
MECP2-226ENST00000640414 NANOS2P60321 138 aaKnown RBP8.46□□□□□ -1.06
MECP2-226ENST00000640414 BLOC1S1P78537 153 aa8.46□□□□□ -1.06
MECP2-226ENST00000640414 CCL20P78556 96 aa8.46□□□□□ -1.06
MECP2-226ENST00000640414 LRRC20Q8TCA0 184 aa8.46□□□□□ -1.06
MECP2-226ENST00000640414 C2CD4CQ8TF44 421 aa8.46□□□□□ -1.06
MECP2-226ENST00000640414 MRPL32Q9BYC8 188 aaKnown RBP8.46□□□□□ -1.06
MECP2-226ENST00000640414 DAZ1Q9NQZ3 744 aaKnown RBP8.46□□□□□ -1.06
MECP2-226ENST00000640414 TECRQ9NZ01 308 aaKnown RBP8.46□□□□□ -1.06
MECP2-226ENST00000640414 SMPXQ9UHP9 88 aa8.46□□□□□ -1.06
MECP2-226ENST00000640414 APLNQ9ULZ1 77 aa8.46□□□□□ -1.06
MECP2-226ENST00000640414 UFC1Q9Y3C8 167 aa8.46□□□□□ -1.06
MECP2-226ENST00000640414 TRAV1-1A0A0B4J248 108 aa8.45□□□□□ -1.06
MECP2-226ENST00000640414 IGHV7-4-1A0A0J9YVY3 117 aa8.45□□□□□ -1.06
MECP2-226ENST00000640414 STAG3L2P0CL84 134 aa8.45□□□□□ -1.06
MECP2-226ENST00000640414 STAG3L3P0CL85 134 aa8.45□□□□□ -1.06
MECP2-226ENST00000640414 FOLR2P14207 255 aa8.45□□□□□ -1.06
MECP2-226ENST00000640414 FGF8P55075 233 aaPredicted RBP8.45□□□□□ -1.06
MECP2-226ENST00000640414 TMEM61Q8N0U2 210 aa8.45□□□□□ -1.06
MECP2-226ENST00000640414 MAPKAPK5-AS1Q8N8E1 139 aa8.45□□□□□ -1.06
MECP2-226ENST00000640414 ZNF503Q96F45 646 aa8.45□□□□□ -1.06
MECP2-226ENST00000640414 RHPN1-AS1Q9BWJ2 59 aa8.45□□□□□ -1.06
MECP2-226ENST00000640414 SLC25A2Q9BXI2 301 aa8.45□□□□□ -1.06
MECP2-226ENST00000640414 A0A1B0GV50 99 aa8.44□□□□□ -1.06
MECP2-226ENST00000640414 MAP1LC3B2A6NCE7 125 aa8.44□□□□□ -1.06
MECP2-226ENST00000640414 C2orf70A6NJV1 201 aa8.44□□□□□ -1.06
MECP2-226ENST00000640414 A8MWP6 167 aa8.44□□□□□ -1.06
MECP2-226ENST00000640414 CHEK1O14757 476 aa8.44□□□□□ -1.06
MECP2-226ENST00000640414 CBLN1P23435 193 aa8.44□□□□□ -1.06
MECP2-226ENST00000640414 APOC4P55056 127 aa8.44□□□□□ -1.06
MECP2-226ENST00000640414 RAB14P61106 215 aa8.44□□□□□ -1.06
MECP2-226ENST00000640414 CLLU1Q5K131 121 aa8.44□□□□□ -1.06
MECP2-226ENST00000640414 C16orf54Q6UWD8 224 aa8.44□□□□□ -1.06
MECP2-226ENST00000640414 S100A7AQ86SG5 101 aa8.44□□□□□ -1.06
MECP2-226ENST00000640414 LYPD6BQ8NI32 183 aa8.44□□□□□ -1.06
MECP2-226ENST00000640414 MAP1LC3BQ9GZQ8 125 aa8.44□□□□□ -1.06
MECP2-226ENST00000640414 HRH4Q9H3N8 390 aa8.44□□□□□ -1.06
MECP2-226ENST00000640414 TMPRSS5Q9H3S3 457 aa8.44□□□□□ -1.06
MECP2-226ENST00000640414 PFDN2Q9UHV9 154 aa8.44□□□□□ -1.06
MECP2-226ENST00000640414 MRPS12O15235 138 aaKnown RBP8.43□□□□□ -1.06
MECP2-226ENST00000640414 CXorf1O96002 111 aa8.43□□□□□ -1.06
MECP2-226ENST00000640414 SNRPCP09234 159 aaKnown RBP8.43□□□□□ -1.06
MECP2-226ENST00000640414 ARL14EPLP0DKL9 152 aa8.43□□□□□ -1.06
MECP2-226ENST00000640414 PYYP10082 97 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 203.9 ms