RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 SCNM1Q9BWG6 230 aa11.55□□□□□ -0.56
SCARB2-221ENST00000640341 A0A1B0GUT8 65 aa11.55□□□□□ -0.56
SCARB2-221ENST00000640341 OR8A1Q8NGG7 326 aa11.55□□□□□ -0.56
SCARB2-221ENST00000640341 RNF125Q96EQ8 232 aa11.55□□□□□ -0.56
SCARB2-221ENST00000640341 MAP1LC3CQ9BXW4 147 aa11.55□□□□□ -0.56
SCARB2-221ENST00000640341 KAAG1Q9UBP8 84 aa11.55□□□□□ -0.56
SCARB2-221ENST00000640341 I3L2K1 104 aa11.54□□□□□ -0.56
SCARB2-221ENST00000640341 CCL25O15444 150 aa11.54□□□□□ -0.56
SCARB2-221ENST00000640341 HLA-DRB1P01911 266 aa11.54□□□□□ -0.56
SCARB2-221ENST00000640341 PSG8Q9UQ74 426 aa11.54□□□□□ -0.56
SCARB2-221ENST00000640341 ZFYVE26Q68DK2 2539 aa11.54□□□□□ -0.56
SCARB2-221ENST00000640341 CT45A10P0DMU9 189 aa11.54□□□□□ -0.56
SCARB2-221ENST00000640341 FBLN7Q53RD9 439 aa11.54□□□□□ -0.56
SCARB2-221ENST00000640341 WFDC3Q8IUB2 231 aa11.54□□□□□ -0.56
SCARB2-221ENST00000640341 B9A039 149 aa11.54□□□□□ -0.56
SCARB2-221ENST00000640341 K7EQM0 130 aa11.54□□□□□ -0.56
SCARB2-221ENST00000640341 ZNF672Q499Z4 452 aaPredicted RBP11.54□□□□□ -0.56
SCARB2-221ENST00000640341 MRPL52Q86TS9 123 aaKnown RBP11.54□□□□□ -0.56
SCARB2-221ENST00000640341 Q8TAT8 98 aa11.54□□□□□ -0.56
SCARB2-221ENST00000640341 IGHV3OR16-13A0A075B7E8 117 aa11.53□□□□□ -0.56
SCARB2-221ENST00000640341 IGHV3-74A0A0B4J1X5 117 aa11.53□□□□□ -0.56
SCARB2-221ENST00000640341 IGLV2-11P01706 119 aa11.53□□□□□ -0.56
SCARB2-221ENST00000640341 GAGE1Q13065 139 aa11.53□□□□□ -0.56
SCARB2-221ENST00000640341 FA2HQ7L5A8 372 aa11.53□□□□□ -0.56
SCARB2-221ENST00000640341 TMEM191AQ9H0A3 160 aa11.53□□□□□ -0.56
SCARB2-221ENST00000640341 TRBV19A0A075B6N1 114 aa11.53□□□□□ -0.56
SCARB2-221ENST00000640341 IGKV2-40A0A087WW87 121 aaPredicted RBP11.53□□□□□ -0.56
SCARB2-221ENST00000640341 K7EIM0 57 aa11.53□□□□□ -0.56
SCARB2-221ENST00000640341 IGKV2D-40P01614 121 aaPredicted RBP11.53□□□□□ -0.56
SCARB2-221ENST00000640341 FAM106CPP0CH98 169 aa11.53□□□□□ -0.56
SCARB2-221ENST00000640341 RNF151Q2KHN1 245 aa11.53□□□□□ -0.56
SCARB2-221ENST00000640341 FAM106AQ4KMX7 169 aa11.53□□□□□ -0.56
SCARB2-221ENST00000640341 FAM120AOSQ5T036 256 aa11.53□□□□□ -0.56
SCARB2-221ENST00000640341 ZNF738Q8NE65 137 aa11.53□□□□□ -0.56
SCARB2-221ENST00000640341 COL25A1Q9BXS0 654 aaPredicted RBP11.53□□□□□ -0.56
SCARB2-221ENST00000640341 AP5S1Q9NUS5 200 aa11.53□□□□□ -0.56
SCARB2-221ENST00000640341 RNF24Q9Y225 148 aa11.53□□□□□ -0.56
SCARB2-221ENST00000640341 A0A087X0K7 114 aa11.53□□□□□ -0.56
SCARB2-221ENST00000640341 TMEM213A2RRL7 107 aa11.53□□□□□ -0.56
SCARB2-221ENST00000640341 CRYGBP07316 175 aa11.53□□□□□ -0.56
SCARB2-221ENST00000640341 OR2T8A6NH00 312 aa11.52□□□□□ -0.57
SCARB2-221ENST00000640341 OR5AL1P0C617 328 aa11.52□□□□□ -0.57
SCARB2-221ENST00000640341 C8orf31Q8N9H6 132 aa11.52□□□□□ -0.57
SCARB2-221ENST00000640341 SPG11Q96JI7 2443 aa11.52□□□□□ -0.57
SCARB2-221ENST00000640341 ZNF491Q8N8L2 437 aa11.52□□□□□ -0.57
SCARB2-221ENST00000640341 LIPFP07098 398 aa11.51□□□□□ -0.57
SCARB2-221ENST00000640341 RBPJQ06330 500 aa11.51□□□□□ -0.57
SCARB2-221ENST00000640341 IGF2-ASQ6U949 168 aa11.51□□□□□ -0.57
SCARB2-221ENST00000640341 AAMDCQ9H7C9 122 aa11.51□□□□□ -0.57
SCARB2-221ENST00000640341 ZNF492Q9P255 531 aa11.51□□□□□ -0.57
SCARB2-221ENST00000640341 IGHV3-66A0A0C4DH42 116 aa11.51□□□□□ -0.57
SCARB2-221ENST00000640341 SLC25A34Q6PIV7 304 aa11.51□□□□□ -0.57
SCARB2-221ENST00000640341 PPP1R14DQ9NXH3 145 aa11.51□□□□□ -0.57
SCARB2-221ENST00000640341 SMKR1H3BMG3 65 aa11.51□□□□□ -0.57
SCARB2-221ENST00000640341 NBR2O15453 112 aa11.51□□□□□ -0.57
SCARB2-221ENST00000640341 IFI27P40305 119 aaPredicted RBP11.51□□□□□ -0.57
SCARB2-221ENST00000640341 RIGQ13278 110 aa11.51□□□□□ -0.57
SCARB2-221ENST00000640341 AMN1Q8IY45 258 aa11.51□□□□□ -0.57
SCARB2-221ENST00000640341 SHANK2-AS3Q9BTD1 123 aa11.51□□□□□ -0.57
SCARB2-221ENST00000640341 MRPS16Q9Y3D3 137 aaKnown RBP11.51□□□□□ -0.57
SCARB2-221ENST00000640341 COX11Q9Y6N1 276 aa11.51□□□□□ -0.57
SCARB2-221ENST00000640341 HLA-DMBP28068 263 aa11.5□□□□□ -0.57
SCARB2-221ENST00000640341 CRIP1P50238 77 aa11.5□□□□□ -0.57
SCARB2-221ENST00000640341 TCF15Q12870 199 aa11.5□□□□□ -0.57
SCARB2-221ENST00000640341 SIGLEC15Q6ZMC9 328 aa11.5□□□□□ -0.57
SCARB2-221ENST00000640341 OR4C5Q8NGB2 326 aa11.5□□□□□ -0.57
SCARB2-221ENST00000640341 CHCHD1Q96BP2 118 aaKnown RBP11.5□□□□□ -0.57
SCARB2-221ENST00000640341 CELSR1Q9NYQ6 3014 aa11.5□□□□□ -0.57
SCARB2-221ENST00000640341 ZNF785A8K8V0 405 aa11.5□□□□□ -0.57
SCARB2-221ENST00000640341 D6R8Y8 96 aa11.5□□□□□ -0.57
SCARB2-221ENST00000640341 TMEM11P17152 192 aa11.5□□□□□ -0.57
SCARB2-221ENST00000640341 LOXL1Q08397 574 aaPredicted RBP11.5□□□□□ -0.57
SCARB2-221ENST00000640341 FAM162BQ5T6X4 162 aa11.5□□□□□ -0.57
SCARB2-221ENST00000640341 DPM3Q9P2X0 92 aa11.5□□□□□ -0.57
SCARB2-221ENST00000640341 NPIPB5A8MRT5 1133 aa11.5□□□□□ -0.57
SCARB2-221ENST00000640341 PSG3Q16557 428 aa11.5□□□□□ -0.57
SCARB2-221ENST00000640341 CT83Q5H943 113 aa11.5□□□□□ -0.57
SCARB2-221ENST00000640341 LYZL1Q6UWQ5 148 aa11.5□□□□□ -0.57
SCARB2-221ENST00000640341 TNFRSF14Q92956 283 aa11.5□□□□□ -0.57
SCARB2-221ENST00000640341 ACACBO00763 2458 aa11.49□□□□□ -0.57
SCARB2-221ENST00000640341 NCR2O95944 276 aa11.49□□□□□ -0.57
SCARB2-221ENST00000640341 PLP1P60201 277 aa11.49□□□□□ -0.57
SCARB2-221ENST00000640341 TMEM75Q8N9X5 138 aa11.49□□□□□ -0.57
SCARB2-221ENST00000640341 SMIM12Q96EX1 92 aa11.49□□□□□ -0.57
SCARB2-221ENST00000640341 CACNA1AO00555 2505 aa11.49□□□□□ -0.57
SCARB2-221ENST00000640341 IGHV3-49A0A0A0MS15 119 aa11.49□□□□□ -0.57
SCARB2-221ENST00000640341 CCL21O00585 134 aa11.49□□□□□ -0.57
SCARB2-221ENST00000640341 PPIFP30405 207 aaKnown RBP11.49□□□□□ -0.57
SCARB2-221ENST00000640341 CSN1S1P47710 185 aa11.49□□□□□ -0.57
SCARB2-221ENST00000640341 JKAMPQ9P055 326 aa11.49□□□□□ -0.57
SCARB2-221ENST00000640341 SOX21Q9Y651 276 aaPredicted RBP11.49□□□□□ -0.57
SCARB2-221ENST00000640341 UQCRFS1P47985 274 aa11.48□□□□□ -0.57
SCARB2-221ENST00000640341 GFRA4Q9GZZ7 299 aa11.48□□□□□ -0.57
SCARB2-221ENST00000640341 HSPB8Q9UJY1 196 aa11.48□□□□□ -0.57
SCARB2-221ENST00000640341 TMEM189A5PLL7 270 aa11.48□□□□□ -0.57
SCARB2-221ENST00000640341 HAX1O00165 279 aa11.48□□□□□ -0.57
SCARB2-221ENST00000640341 NEU4Q8WWR8 484 aaPredicted RBP11.48□□□□□ -0.57
SCARB2-221ENST00000640341 ZNF414Q96IQ9 312 aa11.48□□□□□ -0.57
SCARB2-221ENST00000640341 NDFIP1Q9BT67 221 aa11.48□□□□□ -0.57
SCARB2-221ENST00000640341 H3BRN7 92 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms