RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 THAP8Q8NA92 274 aa5.83□□□□□ -1.48
PNKP-229ENST00000637897 GATAD1Q8WUU5 269 aa5.83□□□□□ -1.48
PNKP-229ENST00000637897 TMEM190Q8WZ59 177 aa5.83□□□□□ -1.48
PNKP-229ENST00000637897 EEF1AKMT3Q96AZ1 226 aa5.83□□□□□ -1.48
PNKP-229ENST00000637897 TVP23CQ96ET8 276 aa5.83□□□□□ -1.48
PNKP-229ENST00000637897 ACY3Q96HD9 319 aa5.83□□□□□ -1.48
PNKP-229ENST00000637897 SPATA25Q9BR10 227 aa5.83□□□□□ -1.48
PNKP-229ENST00000637897 MRPL32Q9BYC8 188 aaKnown RBP5.83□□□□□ -1.48
PNKP-229ENST00000637897 ZMAT4Q9H898 229 aa5.83□□□□□ -1.48
PNKP-229ENST00000637897 SRD5A3Q9H8P0 318 aa5.83□□□□□ -1.48
PNKP-229ENST00000637897 RPS10P5Q9NQ39 176 aa5.83□□□□□ -1.48
PNKP-229ENST00000637897 PUS1Q9Y606 427 aaKnown RBP eCLIP5.83□□□□□ -1.48
PNKP-229ENST00000637897 F11RQ9Y624 299 aaKnown RBP5.83□□□□□ -1.48
PNKP-229ENST00000637897 IGKV1OR2-108A0A075B7D4 117 aa5.82□□□□□ -1.48
PNKP-229ENST00000637897 A0A087WWC5 75 aa5.82□□□□□ -1.48
PNKP-229ENST00000637897 TRBV7-1A0A0A6YYK4 115 aa5.82□□□□□ -1.48
PNKP-229ENST00000637897 OR2T8A6NH00 312 aa5.82□□□□□ -1.48
PNKP-229ENST00000637897 OR11H12B2RN74 326 aa5.82□□□□□ -1.48
PNKP-229ENST00000637897 F6UZH7 168 aa5.82□□□□□ -1.48
PNKP-229ENST00000637897 I3L2K1 104 aa5.82□□□□□ -1.48
PNKP-229ENST00000637897 HMGB3O15347 200 aaKnown RBP5.82□□□□□ -1.48
PNKP-229ENST00000637897 NUPL2O15504 423 aaKnown RBP5.82□□□□□ -1.48
PNKP-229ENST00000637897 TGOLN2O43493 480 aa5.82□□□□□ -1.48
PNKP-229ENST00000637897 PDE6DO43924 150 aa5.82□□□□□ -1.48
PNKP-229ENST00000637897 PAGE4O60829 102 aa5.82□□□□□ -1.48
PNKP-229ENST00000637897 CLN5O75503 358 aa5.82□□□□□ -1.48
PNKP-229ENST00000637897 IGHV3-48P01763 117 aa5.82□□□□□ -1.48
PNKP-229ENST00000637897 CTSGP08311 255 aa5.82□□□□□ -1.48
PNKP-229ENST00000637897 OR5G3P0C626 314 aa5.82□□□□□ -1.48
PNKP-229ENST00000637897 ARL14EPLP0DKL9 152 aa5.82□□□□□ -1.48
PNKP-229ENST00000637897 HIST1H1BP16401 226 aaKnown RBP5.82□□□□□ -1.48
PNKP-229ENST00000637897 CEBPGP53567 150 aa5.82□□□□□ -1.48
PNKP-229ENST00000637897 GCSAMLQ5JQS6 135 aa5.82□□□□□ -1.48
PNKP-229ENST00000637897 FAM90A2PQ658T7 463 aa5.82□□□□□ -1.48
PNKP-229ENST00000637897 TMEM88Q6PEY1 159 aa5.82□□□□□ -1.48
PNKP-229ENST00000637897 OR1L4Q8NGR5 311 aa5.82□□□□□ -1.48
PNKP-229ENST00000637897 VN1R17PQ8TDU5 208 aa5.82□□□□□ -1.48
PNKP-229ENST00000637897 NPIPB3Q92617 1050 aa5.82□□□□□ -1.48
PNKP-229ENST00000637897 MISP3Q96FF7 219 aa5.82□□□□□ -1.48
PNKP-229ENST00000637897 PFDN5Q99471 154 aa5.82□□□□□ -1.48
PNKP-229ENST00000637897 TMPRSS5Q9H3S3 457 aa5.82□□□□□ -1.48
PNKP-229ENST00000637897 FNDC4Q9H6D8 234 aaPredicted RBP5.82□□□□□ -1.48
PNKP-229ENST00000637897 TUBA4BQ9H853 241 aa5.82□□□□□ -1.48
PNKP-229ENST00000637897 TMEM167BQ9NRX6 74 aa5.82□□□□□ -1.48
PNKP-229ENST00000637897 TECRQ9NZ01 308 aaKnown RBP5.82□□□□□ -1.48
PNKP-229ENST00000637897 MRPL36Q9P0J6 103 aaKnown RBP5.82□□□□□ -1.48
PNKP-229ENST00000637897 FUT9Q9Y231 359 aa5.82□□□□□ -1.48
PNKP-229ENST00000637897 PRELID1Q9Y255 219 aa5.82□□□□□ -1.48
PNKP-229ENST00000637897 ARL2-SNX15V9GYD0 113 aa5.82□□□□□ -1.48
PNKP-229ENST00000637897 VPS13DQ5THJ4 4388 aa5.82□□□□□ -1.48
PNKP-229ENST00000637897 ELOA3CA0A087WX78 387 aaPredicted RBP5.81□□□□□ -1.48
PNKP-229ENST00000637897 ZNF320A2RRD8 509 aa5.81□□□□□ -1.48
PNKP-229ENST00000637897 C11orf94C9JXX5 98 aa5.81□□□□□ -1.48
PNKP-229ENST00000637897 ZNF207O43670 478 aaKnown RBP5.81□□□□□ -1.48
PNKP-229ENST00000637897 FABP1P07148 127 aa5.81□□□□□ -1.48
PNKP-229ENST00000637897 DEFA4P12838 97 aa5.81□□□□□ -1.48
PNKP-229ENST00000637897 GCHFRP30047 84 aa5.81□□□□□ -1.48
PNKP-229ENST00000637897 RND2P52198 227 aa5.81□□□□□ -1.48
PNKP-229ENST00000637897 ZNF124Q15973 351 aa5.81□□□□□ -1.48
PNKP-229ENST00000637897 MLANAQ16655 118 aa5.81□□□□□ -1.48
PNKP-229ENST00000637897 ODF3L2Q3SX64 289 aa5.81□□□□□ -1.48
PNKP-229ENST00000637897 FAM78BQ5VT40 261 aa5.81□□□□□ -1.48
PNKP-229ENST00000637897 DMRTA1Q5VZB9 504 aa5.81□□□□□ -1.48
PNKP-229ENST00000637897 PQLC2Q6ZP29 291 aa5.81□□□□□ -1.48
PNKP-229ENST00000637897 GTSCR1Q86UQ5 136 aa5.81□□□□□ -1.48
PNKP-229ENST00000637897 CBLN2Q8IUK8 224 aa5.81□□□□□ -1.48
PNKP-229ENST00000637897 C15orf54Q8N8G6 183 aa5.81□□□□□ -1.48
PNKP-229ENST00000637897 TMEM116Q8NCL8 245 aa5.81□□□□□ -1.48
PNKP-229ENST00000637897 DYNLRB2Q8TF09 96 aa5.81□□□□□ -1.48
PNKP-229ENST00000637897 TRGV9Q99603 122 aa5.81□□□□□ -1.48
PNKP-229ENST00000637897 OVOL2Q9BRP0 275 aa5.81□□□□□ -1.48
PNKP-229ENST00000637897 DNAJC4Q9NNZ3 241 aa5.81□□□□□ -1.48
PNKP-229ENST00000637897 NAT8Q9UHE5 227 aa5.81□□□□□ -1.48
PNKP-229ENST00000637897 DNAH10Q8IVF4 4471 aa5.81□□□□□ -1.48
PNKP-229ENST00000637897 FRAS1Q86XX4 4008 aa5.81□□□□□ -1.48
PNKP-229ENST00000637897 CXorf65A6NEN9 183 aa5.8□□□□□ -1.48
PNKP-229ENST00000637897 ZNF727A8MUV8 499 aa5.8□□□□□ -1.48
PNKP-229ENST00000637897 COX7A2P2O60397 106 aa5.8□□□□□ -1.48
PNKP-229ENST00000637897 APOHP02749 345 aaPredicted RBP5.8□□□□□ -1.48
PNKP-229ENST00000637897 TMEM241Q24JQ0 296 aa5.8□□□□□ -1.48
PNKP-229ENST00000637897 FAM106AQ4KMX7 169 aa5.8□□□□□ -1.48
PNKP-229ENST00000637897 C10orf113Q5VZT2 155 aa5.8□□□□□ -1.48
PNKP-229ENST00000637897 CST9LP1Q5W188 147 aa5.8□□□□□ -1.48
PNKP-229ENST00000637897 OR4X1Q8NH49 305 aa5.8□□□□□ -1.48
PNKP-229ENST00000637897 SMIM7Q9BQ49 75 aa5.8□□□□□ -1.48
PNKP-229ENST00000637897 C20orf24Q9BUV8 137 aa5.8□□□□□ -1.48
PNKP-229ENST00000637897 SDF2L1Q9HCN8 221 aa5.8□□□□□ -1.48
PNKP-229ENST00000637897 SEPSECSQ9HD40 501 aaKnown RBP5.8□□□□□ -1.48
PNKP-229ENST00000637897 C21orf62Q9NYP8 219 aa5.8□□□□□ -1.48
PNKP-229ENST00000637897 MRPL27Q9P0M9 148 aaKnown RBP5.8□□□□□ -1.48
PNKP-229ENST00000637897 AGRNO00468 2067 aa5.79□□□□□ -1.48
PNKP-229ENST00000637897 IGKV1D-37A0A075B6S9 117 aa5.79□□□□□ -1.48
PNKP-229ENST00000637897 IGHV3-49A0A0A0MS15 119 aa5.79□□□□□ -1.48
PNKP-229ENST00000637897 NDUFA4O00483 81 aa5.79□□□□□ -1.48
PNKP-229ENST00000637897 EIF3GO75821 320 aaKnown RBP eCLIP5.79□□□□□ -1.48
PNKP-229ENST00000637897 MT-ND4LP03901 98 aa5.79□□□□□ -1.48
PNKP-229ENST00000637897 ATF4P18848 351 aaPredicted RBP5.79□□□□□ -1.48
PNKP-229ENST00000637897 FCGR2BP31994 310 aaPredicted RBP5.79□□□□□ -1.48
PNKP-229ENST00000637897 MIR17HGQ75NE6 70 aa5.79□□□□□ -1.48
PNKP-229ENST00000637897 STXBP6Q8NFX7 210 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms