RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 TMEM208Q9BTX3 173 aa9.95□□□□□ -0.82
PNKP-228ENST00000637325 PPP1R14DQ9NXH3 145 aa9.95□□□□□ -0.82
PNKP-228ENST00000637325 WDR83OSQ9Y284 106 aa9.95□□□□□ -0.82
PNKP-228ENST00000637325 RFNGQ9Y644 331 aa9.95□□□□□ -0.82
PNKP-228ENST00000637325 TMEM189A5PLL7 270 aa9.94□□□□□ -0.82
PNKP-228ENST00000637325 ZNF705FA8MVS1 300 aaPredicted RBP9.94□□□□□ -0.82
PNKP-228ENST00000637325 HBE1P02100 147 aa9.94□□□□□ -0.82
PNKP-228ENST00000637325 AMBPP02760 352 aa9.94□□□□□ -0.82
PNKP-228ENST00000637325 ZNF705DP0CH99 300 aaPredicted RBP9.94□□□□□ -0.82
PNKP-228ENST00000637325 ZNF705BP0CI00 300 aaPredicted RBP9.94□□□□□ -0.82
PNKP-228ENST00000637325 FGF7P21781 194 aa9.94□□□□□ -0.82
PNKP-228ENST00000637325 TCTAP57738 103 aa9.94□□□□□ -0.82
PNKP-228ENST00000637325 RHOBP62745 196 aa9.94□□□□□ -0.82
PNKP-228ENST00000637325 CYCSP99999 105 aaKnown RBP9.94□□□□□ -0.82
PNKP-228ENST00000637325 PSG3Q16557 428 aa9.94□□□□□ -0.82
PNKP-228ENST00000637325 Q6ZTC4 211 aa9.94□□□□□ -0.82
PNKP-228ENST00000637325 ZNF767PQ75MW2 155 aa9.94□□□□□ -0.82
PNKP-228ENST00000637325 TMEM37Q8WXS4 190 aa9.94□□□□□ -0.82
PNKP-228ENST00000637325 PFDN5Q99471 154 aa9.94□□□□□ -0.82
PNKP-228ENST00000637325 NMES1Q9C002 83 aa9.94□□□□□ -0.82
PNKP-228ENST00000637325 SLC25A31Q9H0C2 315 aa9.94□□□□□ -0.82
PNKP-228ENST00000637325 CELA1Q9UNI1 258 aa9.94□□□□□ -0.82
PNKP-228ENST00000637325 E5RGE8 158 aa9.93□□□□□ -0.82
PNKP-228ENST00000637325 SSNA1O43805 119 aa9.93□□□□□ -0.82
PNKP-228ENST00000637325 SNRPCP09234 159 aaKnown RBP9.93□□□□□ -0.82
PNKP-228ENST00000637325 SPART-AS1P0CW21 52 aa9.93□□□□□ -0.82
PNKP-228ENST00000637325 CXCL2P19875 107 aa9.93□□□□□ -0.82
PNKP-228ENST00000637325 CXCL3P19876 107 aa9.93□□□□□ -0.82
PNKP-228ENST00000637325 B2MP61769 119 aa9.93□□□□□ -0.82
PNKP-228ENST00000637325 HIST1H1AQ02539 215 aaPredicted RBP9.93□□□□□ -0.82
PNKP-228ENST00000637325 VWC2Q2TAL6 325 aa9.93□□□□□ -0.82
PNKP-228ENST00000637325 C12orf74Q32Q52 190 aa9.93□□□□□ -0.82
PNKP-228ENST00000637325 LRRC37A5PQ49AS3 106 aa9.93□□□□□ -0.82
PNKP-228ENST00000637325 LCN15Q6UWW0 184 aa9.93□□□□□ -0.82
PNKP-228ENST00000637325 OR11H7Q8NGC8 314 aa9.93□□□□□ -0.82
PNKP-228ENST00000637325 IGF2BP2-AS1Q96M15 143 aa9.93□□□□□ -0.82
PNKP-228ENST00000637325 SLC50A1Q9BRV3 221 aa9.93□□□□□ -0.82
PNKP-228ENST00000637325 MARVELD1Q9BSK0 173 aa9.93□□□□□ -0.82
PNKP-228ENST00000637325 A8MTW9 85 aa9.92□□□□□ -0.82
PNKP-228ENST00000637325 MRPS12O15235 138 aaKnown RBP9.92□□□□□ -0.82
PNKP-228ENST00000637325 INSP01308 110 aa9.92□□□□□ -0.82
PNKP-228ENST00000637325 RPL29P47914 159 aaKnown RBP9.92□□□□□ -0.82
PNKP-228ENST00000637325 PRR20EP86478 221 aa9.92□□□□□ -0.82
PNKP-228ENST00000637325 PRR20CP86479 221 aa9.92□□□□□ -0.82
PNKP-228ENST00000637325 PRR20DP86480 221 aa9.92□□□□□ -0.82
PNKP-228ENST00000637325 PRR20BP86481 221 aa9.92□□□□□ -0.82
PNKP-228ENST00000637325 PRR20AP86496 221 aa9.92□□□□□ -0.82
PNKP-228ENST00000637325 OPCMLQ14982 345 aa9.92□□□□□ -0.82
PNKP-228ENST00000637325 SPINK13Q1W4C9 94 aa9.92□□□□□ -0.82
PNKP-228ENST00000637325 RRN3P1Q2M238 152 aa9.92□□□□□ -0.82
PNKP-228ENST00000637325 LGALS9CQ6DKI2 356 aa9.92□□□□□ -0.82
PNKP-228ENST00000637325 AMTNQ6UX39 209 aa9.92□□□□□ -0.82
PNKP-228ENST00000637325 C1orf158Q8N1D5 194 aa9.92□□□□□ -0.82
PNKP-228ENST00000637325 OR8A1Q8NGG7 326 aa9.92□□□□□ -0.82
PNKP-228ENST00000637325 RPUSD4Q96CM3 377 aaKnown RBP9.92□□□□□ -0.82
PNKP-228ENST00000637325 SLC39A9Q9NUM3 307 aa9.92□□□□□ -0.82
PNKP-228ENST00000637325 PXMP4Q9Y6I8 212 aa9.92□□□□□ -0.82
PNKP-228ENST00000637325 KMT2AQ03164 3969 aa9.92□□□□□ -0.82
PNKP-228ENST00000637325 DEFB131BA0A096LNP1 70 aa9.91□□□□□ -0.82
PNKP-228ENST00000637325 LOC102723971A0A1B0GUV8 181 aa9.91□□□□□ -0.82
PNKP-228ENST00000637325 M0R2Z0 102 aa9.91□□□□□ -0.82
PNKP-228ENST00000637325 MPDU1O75352 247 aa9.91□□□□□ -0.82
PNKP-228ENST00000637325 NHLH2Q02577 135 aa9.91□□□□□ -0.82
PNKP-228ENST00000637325 ZNF331Q9NQX6 463 aaPredicted RBP9.91□□□□□ -0.82
PNKP-228ENST00000637325 OR5AC2Q9NZP5 309 aa9.91□□□□□ -0.82
PNKP-228ENST00000637325 TRAV5A0A0B4J249 113 aa9.9□□□□□ -0.82
PNKP-228ENST00000637325 TEX48A0A1B0GUV7 120 aa9.9□□□□□ -0.82
PNKP-228ENST00000637325 H3BTX0 84 aa9.9□□□□□ -0.82
PNKP-228ENST00000637325 BOLA2-SMG1P6H3BVE0 249 aa9.9□□□□□ -0.82
PNKP-228ENST00000637325 MORN5Q5VZ52 161 aa9.9□□□□□ -0.82
PNKP-228ENST00000637325 OR5C1Q8NGR4 320 aa9.9□□□□□ -0.82
PNKP-228ENST00000637325 CHAC2Q8WUX2 184 aa9.9□□□□□ -0.82
PNKP-228ENST00000637325 APLNQ9ULZ1 77 aa9.9□□□□□ -0.82
PNKP-228ENST00000637325 VPS13DQ5THJ4 4388 aa9.9□□□□□ -0.82
PNKP-228ENST00000637325 DNAH6Q9C0G6 4158 aa9.89□□□□□ -0.83
PNKP-228ENST00000637325 IGHV4-4A0A075B6R2 117 aa9.89□□□□□ -0.83
PNKP-228ENST00000637325 TRAV12-2A0A075B6T6 113 aa9.89□□□□□ -0.83
PNKP-228ENST00000637325 PRB4P10163 310 aaPredicted RBP9.89□□□□□ -0.83
PNKP-228ENST00000637325 CLINT1Q14677 625 aa9.89□□□□□ -0.83
PNKP-228ENST00000637325 GUK1Q16774 197 aa9.89□□□□□ -0.83
PNKP-228ENST00000637325 FAM222AQ5U5X8 452 aa9.89□□□□□ -0.83
PNKP-228ENST00000637325 BAP18Q8IXM2 172 aa9.89□□□□□ -0.83
PNKP-228ENST00000637325 OR10J6PQ8NGY7 276 aa9.89□□□□□ -0.83
PNKP-228ENST00000637325 THAP6Q8TBB0 222 aa9.89□□□□□ -0.83
PNKP-228ENST00000637325 PPP1R1CQ8WVI7 109 aa9.89□□□□□ -0.83
PNKP-228ENST00000637325 NIPSNAP3BQ9BS92 247 aa9.89□□□□□ -0.83
PNKP-228ENST00000637325 RNF126Q9BV68 326 aa9.89□□□□□ -0.83
PNKP-228ENST00000637325 NPCDR1Q9BY65 106 aa9.89□□□□□ -0.83
PNKP-228ENST00000637325 DKK2Q9UBU2 259 aa9.89□□□□□ -0.83
PNKP-228ENST00000637325 ZNF705GA8MUZ8 300 aaPredicted RBP9.88□□□□□ -0.83
PNKP-228ENST00000637325 H0YIZ8 118 aa9.88□□□□□ -0.83
PNKP-228ENST00000637325 H3BQ15 152 aa9.88□□□□□ -0.83
PNKP-228ENST00000637325 SLC17A3O00476 420 aa9.88□□□□□ -0.83
PNKP-228ENST00000637325 CRXO43186 299 aaPredicted RBP9.88□□□□□ -0.83
PNKP-228ENST00000637325 PET100P0DJ07 73 aa9.88□□□□□ -0.83
PNKP-228ENST00000637325 IGLC2P0DOY2 106 aa9.88□□□□□ -0.83
PNKP-228ENST00000637325 H2BFSP57053 126 aa9.88□□□□□ -0.83
PNKP-228ENST00000637325 LINC01587Q99440 93 aa9.88□□□□□ -0.83
PNKP-228ENST00000637325 YTHDF2Q9Y5A9 579 aaKnown RBP9.88□□□□□ -0.83
PNKP-228ENST00000637325 RPP25LQ8N5L8 163 aaKnown RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms