RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 S100A11P31949 105 aa13.22□□□□□ -0.29
CLN6-214ENST00000636314 CNN1P51911 297 aaKnown RBP13.22□□□□□ -0.29
CLN6-214ENST00000636314 BAXQ07812 192 aa13.22□□□□□ -0.29
CLN6-214ENST00000636314 C10orf113Q5VZT2 155 aa13.22□□□□□ -0.29
CLN6-214ENST00000636314 WDR83OSQ9Y284 106 aa13.22□□□□□ -0.29
CLN6-214ENST00000636314 TRAV10A0A0B4J240 114 aa13.21□□□□□ -0.29
CLN6-214ENST00000636314 TMEM189A5PLL7 270 aa13.21□□□□□ -0.29
CLN6-214ENST00000636314 SIX6O95475 246 aa13.21□□□□□ -0.29
CLN6-214ENST00000636314 CXCL2P19875 107 aa13.21□□□□□ -0.29
CLN6-214ENST00000636314 CXCL3P19876 107 aa13.21□□□□□ -0.29
CLN6-214ENST00000636314 TCTAP57738 103 aa13.21□□□□□ -0.29
CLN6-214ENST00000636314 DEFA1P59665 94 aa13.21□□□□□ -0.29
CLN6-214ENST00000636314 DEFA3P59666 94 aa13.21□□□□□ -0.29
CLN6-214ENST00000636314 VWC2Q2TAL6 325 aa13.21□□□□□ -0.29
CLN6-214ENST00000636314 MIC13Q5XKP0 118 aa13.21□□□□□ -0.29
CLN6-214ENST00000636314 Q6ZRG5 221 aa13.21□□□□□ -0.29
CLN6-214ENST00000636314 BPIFA4PQ86YQ2 179 aa13.21□□□□□ -0.29
CLN6-214ENST00000636314 RFNGQ9Y644 331 aa13.21□□□□□ -0.29
CLN6-214ENST00000636314 IGLL5B9A064 214 aa13.2□□□□□ -0.3
CLN6-214ENST00000636314 MRPS12O15235 138 aaKnown RBP13.2□□□□□ -0.3
CLN6-214ENST00000636314 AMBPP02760 352 aa13.2□□□□□ -0.3
CLN6-214ENST00000636314 EMP1P54849 157 aa13.2□□□□□ -0.3
CLN6-214ENST00000636314 PRR20EP86478 221 aa13.2□□□□□ -0.3
CLN6-214ENST00000636314 PRR20CP86479 221 aa13.2□□□□□ -0.3
CLN6-214ENST00000636314 PRR20DP86480 221 aa13.2□□□□□ -0.3
CLN6-214ENST00000636314 PRR20BP86481 221 aa13.2□□□□□ -0.3
CLN6-214ENST00000636314 PRR20AP86496 221 aa13.2□□□□□ -0.3
CLN6-214ENST00000636314 LCN15Q6UWW0 184 aa13.2□□□□□ -0.3
CLN6-214ENST00000636314 AMTNQ6UX39 209 aa13.2□□□□□ -0.3
CLN6-214ENST00000636314 TMEM37Q8WXS4 190 aa13.2□□□□□ -0.3
CLN6-214ENST00000636314 BATF3Q9NR55 127 aa13.2□□□□□ -0.3
CLN6-214ENST00000636314 HBE1P02100 147 aa13.19□□□□□ -0.3
CLN6-214ENST00000636314 RLN2P04090 185 aa13.19□□□□□ -0.3
CLN6-214ENST00000636314 HIST1H1AQ02539 215 aaPredicted RBP13.19□□□□□ -0.3
CLN6-214ENST00000636314 OPCMLQ14982 345 aa13.19□□□□□ -0.3
CLN6-214ENST00000636314 PSG3Q16557 428 aa13.19□□□□□ -0.3
CLN6-214ENST00000636314 ATP6V1FQ16864 119 aa13.19□□□□□ -0.3
CLN6-214ENST00000636314 SPINK13Q1W4C9 94 aa13.19□□□□□ -0.3
CLN6-214ENST00000636314 LRRC37A5PQ49AS3 106 aa13.19□□□□□ -0.3
CLN6-214ENST00000636314 MORN5Q5VZ52 161 aa13.19□□□□□ -0.3
CLN6-214ENST00000636314 ZNF767PQ75MW2 155 aa13.19□□□□□ -0.3
CLN6-214ENST00000636314 C1orf158Q8N1D5 194 aa13.19□□□□□ -0.3
CLN6-214ENST00000636314 OR11H7Q8NGC8 314 aa13.19□□□□□ -0.3
CLN6-214ENST00000636314 OR1L4Q8NGR5 311 aa13.19□□□□□ -0.3
CLN6-214ENST00000636314 IGF2BP2-AS1Q96M15 143 aa13.19□□□□□ -0.3
CLN6-214ENST00000636314 PFDN5Q99471 154 aa13.19□□□□□ -0.3
CLN6-214ENST00000636314 SLC50A1Q9BRV3 221 aa13.19□□□□□ -0.3
CLN6-214ENST00000636314 TMEM208Q9BTX3 173 aa13.19□□□□□ -0.3
CLN6-214ENST00000636314 NMES1Q9C002 83 aa13.19□□□□□ -0.3
CLN6-214ENST00000636314 M0R2Z0 102 aa13.18□□□□□ -0.3
CLN6-214ENST00000636314 INSP01308 110 aa13.18□□□□□ -0.3
CLN6-214ENST00000636314 SNRPCP09234 159 aaKnown RBP13.18□□□□□ -0.3
CLN6-214ENST00000636314 FGF7P21781 194 aa13.18□□□□□ -0.3
CLN6-214ENST00000636314 B2MP61769 119 aa13.18□□□□□ -0.3
CLN6-214ENST00000636314 C12orf74Q32Q52 190 aa13.18□□□□□ -0.3
CLN6-214ENST00000636314 OR8A1Q8NGG7 326 aa13.18□□□□□ -0.3
CLN6-214ENST00000636314 MARVELD1Q9BSK0 173 aa13.18□□□□□ -0.3
CLN6-214ENST00000636314 DNAJC4Q9NNZ3 241 aa13.18□□□□□ -0.3
CLN6-214ENST00000636314 SLC39A9Q9NUM3 307 aa13.18□□□□□ -0.3
CLN6-214ENST00000636314 KIAA1109Q2LD37 5005 aa13.18□□□□□ -0.3
CLN6-214ENST00000636314 E5RGE8 158 aa13.17□□□□□ -0.3
CLN6-214ENST00000636314 BOLA2-SMG1P6H3BVE0 249 aa13.17□□□□□ -0.3
CLN6-214ENST00000636314 SPART-AS1P0CW21 52 aa13.17□□□□□ -0.3
CLN6-214ENST00000636314 RPL29P47914 159 aaKnown RBP13.17□□□□□ -0.3
CLN6-214ENST00000636314 RHOBP62745 196 aa13.17□□□□□ -0.3
CLN6-214ENST00000636314 CYCSP99999 105 aaKnown RBP13.17□□□□□ -0.3
CLN6-214ENST00000636314 SLC25A31Q9H0C2 315 aa13.17□□□□□ -0.3
CLN6-214ENST00000636314 ZNF331Q9NQX6 463 aaPredicted RBP13.17□□□□□ -0.3
CLN6-214ENST00000636314 PXMP4Q9Y6I8 212 aa13.17□□□□□ -0.3
CLN6-214ENST00000636314 DEFB131BA0A096LNP1 70 aa13.16□□□□□ -0.3
CLN6-214ENST00000636314 TEX48A0A1B0GUV7 120 aa13.16□□□□□ -0.3
CLN6-214ENST00000636314 LOC102723971A0A1B0GUV8 181 aa13.16□□□□□ -0.3
CLN6-214ENST00000636314 MPDU1O75352 247 aa13.16□□□□□ -0.3
CLN6-214ENST00000636314 RRN3P1Q2M238 152 aa13.16□□□□□ -0.3
CLN6-214ENST00000636314 RPUSD4Q96CM3 377 aaKnown RBP13.16□□□□□ -0.3
CLN6-214ENST00000636314 PPP1R14DQ9NXH3 145 aa13.16□□□□□ -0.3
CLN6-214ENST00000636314 OR5AC2Q9NZP5 309 aa13.16□□□□□ -0.3
CLN6-214ENST00000636314 IGHV4-4A0A075B6R2 117 aa13.15□□□□□ -0.3
CLN6-214ENST00000636314 H3BTX0 84 aa13.15□□□□□ -0.3
CLN6-214ENST00000636314 SSNA1O43805 119 aa13.15□□□□□ -0.3
CLN6-214ENST00000636314 IGLC2P0DOY2 106 aa13.15□□□□□ -0.3
CLN6-214ENST00000636314 BAP18Q8IXM2 172 aa13.15□□□□□ -0.3
CLN6-214ENST00000636314 OR5C1Q8NGR4 320 aa13.15□□□□□ -0.3
CLN6-214ENST00000636314 CHAC2Q8WUX2 184 aa13.15□□□□□ -0.3
CLN6-214ENST00000636314 APLNQ9ULZ1 77 aa13.15□□□□□ -0.3
CLN6-214ENST00000636314 SLC17A3O00476 420 aa13.14□□□□□ -0.31
CLN6-214ENST00000636314 CRXO43186 299 aaPredicted RBP13.14□□□□□ -0.31
CLN6-214ENST00000636314 PRB4P10163 310 aaPredicted RBP13.14□□□□□ -0.31
CLN6-214ENST00000636314 NHLH2Q02577 135 aa13.14□□□□□ -0.31
CLN6-214ENST00000636314 FAM222AQ5U5X8 452 aa13.14□□□□□ -0.31
CLN6-214ENST00000636314 THAP6Q8TBB0 222 aa13.14□□□□□ -0.31
CLN6-214ENST00000636314 RNF126Q9BV68 326 aa13.14□□□□□ -0.31
CLN6-214ENST00000636314 NPCDR1Q9BY65 106 aa13.14□□□□□ -0.31
CLN6-214ENST00000636314 DKK2Q9UBU2 259 aa13.14□□□□□ -0.31
CLN6-214ENST00000636314 YTHDF2Q9Y5A9 579 aaKnown RBP13.14□□□□□ -0.31
CLN6-214ENST00000636314 TRAV12-2A0A075B6T6 113 aa13.13□□□□□ -0.31
CLN6-214ENST00000636314 TRAV5A0A0B4J249 113 aa13.13□□□□□ -0.31
CLN6-214ENST00000636314 H0YIZ8 118 aa13.13□□□□□ -0.31
CLN6-214ENST00000636314 H3BQ15 152 aa13.13□□□□□ -0.31
CLN6-214ENST00000636314 H2BFSP57053 126 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms