RNA–Protein interactions for RNA: ENST00000635917.1

CACNA1A-219, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,832 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-219ENST00000635917 HIST1H2BCP62807 126 aa9.65□□□□□ -0.86
CACNA1A-219ENST00000635917 HIST2H2BEQ16778 126 aa9.65□□□□□ -0.86
CACNA1A-219ENST00000635917 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.65□□□□□ -0.86
CACNA1A-219ENST00000635917 KCNIP4Q6PIL6 250 aa9.65□□□□□ -0.86
CACNA1A-219ENST00000635917 FAM231DQ6ZW35 169 aa9.65□□□□□ -0.86
CACNA1A-219ENST00000635917 NHLRC2Q8NBF2 726 aa9.65□□□□□ -0.86
CACNA1A-219ENST00000635917 HIST1H2BHQ93079 126 aa9.65□□□□□ -0.86
CACNA1A-219ENST00000635917 FMC1Q96HJ9 113 aa9.65□□□□□ -0.86
CACNA1A-219ENST00000635917 USMG5Q96IX5 58 aa9.65□□□□□ -0.86
CACNA1A-219ENST00000635917 GPR82Q96P67 336 aa9.65□□□□□ -0.86
CACNA1A-219ENST00000635917 HIST1H2BNQ99877 126 aa9.65□□□□□ -0.86
CACNA1A-219ENST00000635917 HIST1H2BMQ99879 126 aa9.65□□□□□ -0.86
CACNA1A-219ENST00000635917 FASNP49327 2511 aaKnown RBP9.64□□□□□ -0.87
CACNA1A-219ENST00000635917 TRBV6-1A0A0K0K1D8 114 aa9.64□□□□□ -0.87
CACNA1A-219ENST00000635917 PPP5D1E7EU14 171 aa9.64□□□□□ -0.87
CACNA1A-219ENST00000635917 TRBV12-3P01733 135 aa9.64□□□□□ -0.87
CACNA1A-219ENST00000635917 IGHG4P01861 327 aa9.64□□□□□ -0.87
CACNA1A-219ENST00000635917 S100A9P06702 114 aaKnown RBP9.64□□□□□ -0.87
CACNA1A-219ENST00000635917 TPPP2P59282 170 aa9.64□□□□□ -0.87
CACNA1A-219ENST00000635917 RPL15P61313 204 aaKnown RBP9.64□□□□□ -0.87
CACNA1A-219ENST00000635917 SNRPEP62304 92 aaKnown RBP9.64□□□□□ -0.87
CACNA1A-219ENST00000635917 FRZBQ92765 325 aa9.64□□□□□ -0.87
CACNA1A-219ENST00000635917 VPREB3Q9UKI3 123 aa9.64□□□□□ -0.87
CACNA1A-219ENST00000635917 TRAV9-1A0A075B6T8 112 aa9.63□□□□□ -0.87
CACNA1A-219ENST00000635917 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.63□□□□□ -0.87
CACNA1A-219ENST00000635917 ZNF785A8K8V0 405 aa9.63□□□□□ -0.87
CACNA1A-219ENST00000635917 UBE2CO00762 179 aa9.63□□□□□ -0.87
CACNA1A-219ENST00000635917 ZNF253O75346 499 aa9.63□□□□□ -0.87
CACNA1A-219ENST00000635917 TMEM95Q3KNT9 176 aa9.63□□□□□ -0.87
CACNA1A-219ENST00000635917 IBA57Q5T440 356 aaKnown RBP9.63□□□□□ -0.87
CACNA1A-219ENST00000635917 SGK494Q96LW2 274 aa9.63□□□□□ -0.87
CACNA1A-219ENST00000635917 ANK3Q12955 4377 aaKnown RBP9.63□□□□□ -0.87
CACNA1A-219ENST00000635917 A0A087X0K7 114 aa9.63□□□□□ -0.87
CACNA1A-219ENST00000635917 TRAV8-1A0A0A6YYK1 113 aa9.63□□□□□ -0.87
CACNA1A-219ENST00000635917 J3QL48 77 aa9.63□□□□□ -0.87
CACNA1A-219ENST00000635917 M0R3E3 92 aa9.63□□□□□ -0.87
CACNA1A-219ENST00000635917 PSMB8P28062 276 aa9.63□□□□□ -0.87
CACNA1A-219ENST00000635917 RAB9AP51151 201 aa9.63□□□□□ -0.87
CACNA1A-219ENST00000635917 UBE2G1P62253 170 aa9.63□□□□□ -0.87
CACNA1A-219ENST00000635917 RELQ04864 619 aaPredicted RBP9.63□□□□□ -0.87
CACNA1A-219ENST00000635917 LINC00322Q6ZN03 302 aaPredicted RBP9.63□□□□□ -0.87
CACNA1A-219ENST00000635917 Q71RC1 249 aaPredicted RBP9.63□□□□□ -0.87
CACNA1A-219ENST00000635917 ARL6IP6Q8N6S5 226 aa9.63□□□□□ -0.87
CACNA1A-219ENST00000635917 SAV1Q9H4B6 383 aaPredicted RBP9.63□□□□□ -0.87
CACNA1A-219ENST00000635917 SMIM27A0A1W2PRY6 76 aa9.62□□□□□ -0.87
CACNA1A-219ENST00000635917 DIRC3C9JPN6 131 aa9.62□□□□□ -0.87
CACNA1A-219ENST00000635917 APOHP02749 345 aaPredicted RBP9.62□□□□□ -0.87
CACNA1A-219ENST00000635917 TRGC1P0CF51 173 aa9.62□□□□□ -0.87
CACNA1A-219ENST00000635917 MGST1P10620 155 aaKnown RBP9.62□□□□□ -0.87
CACNA1A-219ENST00000635917 KRTAP1-1Q07627 177 aa9.62□□□□□ -0.87
CACNA1A-219ENST00000635917 C1orf194Q5T5A4 169 aa9.62□□□□□ -0.87
CACNA1A-219ENST00000635917 GOLT1AQ6ZVE7 132 aa9.62□□□□□ -0.87
CACNA1A-219ENST00000635917 Q86TA4 180 aa9.62□□□□□ -0.87
CACNA1A-219ENST00000635917 OR8I2Q8N0Y5 310 aa9.62□□□□□ -0.87
CACNA1A-219ENST00000635917 TMEM75Q8N9X5 138 aa9.62□□□□□ -0.87
CACNA1A-219ENST00000635917 NUDT10Q8NFP7 164 aa9.62□□□□□ -0.87
CACNA1A-219ENST00000635917 NUDT11Q96G61 164 aa9.62□□□□□ -0.87
CACNA1A-219ENST00000635917 PRSS22Q9GZN4 317 aa9.62□□□□□ -0.87
CACNA1A-219ENST00000635917 GNB4Q9HAV0 340 aa9.62□□□□□ -0.87
CACNA1A-219ENST00000635917 RPH3ALQ9UNE2 315 aa9.62□□□□□ -0.87
CACNA1A-219ENST00000635917 C19orf71A6NCJ1 209 aa9.61□□□□□ -0.87
CACNA1A-219ENST00000635917 SMUG1Q53HV7 270 aa9.61□□□□□ -0.87
CACNA1A-219ENST00000635917 ACTL10Q5JWF8 245 aa9.61□□□□□ -0.87
CACNA1A-219ENST00000635917 LCNL1Q6ZST4 164 aa9.61□□□□□ -0.87
CACNA1A-219ENST00000635917 CMTM2Q8TAZ6 248 aa9.61□□□□□ -0.87
CACNA1A-219ENST00000635917 BTF3L4Q96K17 158 aa9.61□□□□□ -0.87
CACNA1A-219ENST00000635917 HECTD1Q9ULT8 2610 aa9.61□□□□□ -0.87
CACNA1A-219ENST00000635917 NF1P21359 2839 aa9.61□□□□□ -0.87
CACNA1A-219ENST00000635917 HOXA3O43365 443 aaPredicted RBP9.61□□□□□ -0.87
CACNA1A-219ENST00000635917 PF4V1P10720 104 aa9.61□□□□□ -0.87
CACNA1A-219ENST00000635917 S100A7P31151 101 aa9.61□□□□□ -0.87
CACNA1A-219ENST00000635917 ARL3P36405 182 aa9.61□□□□□ -0.87
CACNA1A-219ENST00000635917 PSG9Q00887 426 aa9.61□□□□□ -0.87
CACNA1A-219ENST00000635917 RPEL1Q2QD12 228 aa9.61□□□□□ -0.87
CACNA1A-219ENST00000635917 UNQ9165/PRO28630Q6UXU0 137 aa9.61□□□□□ -0.87
CACNA1A-219ENST00000635917 TMEM183AQ8IXX5 376 aa9.61□□□□□ -0.87
CACNA1A-219ENST00000635917 ZNF702PQ9H963 129 aa9.61□□□□□ -0.87
CACNA1A-219ENST00000635917 ZNF331Q9NQX6 463 aaPredicted RBP9.61□□□□□ -0.87
CACNA1A-219ENST00000635917 TMEM89A2RUT3 159 aa9.6□□□□□ -0.87
CACNA1A-219ENST00000635917 NDUFA4O00483 81 aa9.6□□□□□ -0.87
CACNA1A-219ENST00000635917 FRMD6-AS1P0C7T7 363 aa9.6□□□□□ -0.87
CACNA1A-219ENST00000635917 PSG3Q16557 428 aa9.6□□□□□ -0.87
CACNA1A-219ENST00000635917 C10orf99Q6UWK7 81 aa9.6□□□□□ -0.87
CACNA1A-219ENST00000635917 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.6□□□□□ -0.87
CACNA1A-219ENST00000635917 FOXC2Q99958 501 aa9.6□□□□□ -0.87
CACNA1A-219ENST00000635917 ZNF492Q9P255 531 aa9.6□□□□□ -0.87
CACNA1A-219ENST00000635917 CUBNO60494 3623 aa9.6□□□□□ -0.87
CACNA1A-219ENST00000635917 A0A0G2JLM5 398 aa9.59□□□□□ -0.87
CACNA1A-219ENST00000635917 NPIPB6E9PJ23 425 aa9.59□□□□□ -0.87
CACNA1A-219ENST00000635917 IGHV3-11P01762 117 aa9.59□□□□□ -0.87
CACNA1A-219ENST00000635917 S100A6P06703 90 aa9.59□□□□□ -0.87
CACNA1A-219ENST00000635917 HOXA5P20719 270 aa9.59□□□□□ -0.87
CACNA1A-219ENST00000635917 FABP9Q0Z7S8 132 aa9.59□□□□□ -0.87
CACNA1A-219ENST00000635917 C16orf54Q6UWD8 224 aa9.59□□□□□ -0.87
CACNA1A-219ENST00000635917 OR4X2Q8NGF9 303 aa9.59□□□□□ -0.87
CACNA1A-219ENST00000635917 MYOZ3Q8TDC0 251 aa9.59□□□□□ -0.87
CACNA1A-219ENST00000635917 METTL26Q96S19 204 aa9.59□□□□□ -0.87
CACNA1A-219ENST00000635917 AAMDCQ9H7C9 122 aa9.59□□□□□ -0.87
CACNA1A-219ENST00000635917 CA1P00915 261 aaPredicted RBP9.59□□□□□ -0.88
CACNA1A-219ENST00000635917 RPLP1P05386 114 aaKnown RBP9.59□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms