RNA–Protein interactions for RNA: ENST00000635828.1

CDKL5-209, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5 BASIC

Gene CDKL5, Length 3,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-209ENST00000635828 FXYD5Q96DB9 178 aa6.31□□□□□ -1.4
CDKL5-209ENST00000635828 FUT9Q9Y231 359 aa6.31□□□□□ -1.4
CDKL5-209ENST00000635828 ELOA3CA0A087WX78 387 aaPredicted RBP6.31□□□□□ -1.4
CDKL5-209ENST00000635828 A0A1W2PS18 150 aa6.31□□□□□ -1.4
CDKL5-209ENST00000635828 RBMY1BA6NDE4 496 aaKnown RBP6.31□□□□□ -1.4
CDKL5-209ENST00000635828 RBMY1EA6NEQ0 496 aaKnown RBP6.31□□□□□ -1.4
CDKL5-209ENST00000635828 RBMY1DP0C7P1 496 aaKnown RBP6.31□□□□□ -1.4
CDKL5-209ENST00000635828 SAT2Q96F10 170 aaPredicted RBP6.31□□□□□ -1.4
CDKL5-209ENST00000635828 BORCS7-ASMTA0A0B4J1R7 106 aa6.3□□□□□ -1.4
CDKL5-209ENST00000635828 RPL35AP18077 110 aaKnown RBP6.3□□□□□ -1.4
CDKL5-209ENST00000635828 FXYD7P58549 80 aa6.3□□□□□ -1.4
CDKL5-209ENST00000635828 CCL20P78556 96 aa6.3□□□□□ -1.4
CDKL5-209ENST00000635828 KIR3DS1Q14943 382 aa6.3□□□□□ -1.4
CDKL5-209ENST00000635828 SPAG8Q99932 426 aaPredicted RBP6.3□□□□□ -1.4
CDKL5-209ENST00000635828 RETNQ9HD89 108 aa6.3□□□□□ -1.4
CDKL5-209ENST00000635828 TAAR5O14804 337 aa6.3□□□□□ -1.4
CDKL5-209ENST00000635828 PRM2P04554 102 aa6.3□□□□□ -1.4
CDKL5-209ENST00000635828 ACTL10Q5JWF8 245 aa6.3□□□□□ -1.4
CDKL5-209ENST00000635828 OR1L4Q8NGR5 311 aa6.3□□□□□ -1.4
CDKL5-209ENST00000635828 SGK494Q96LW2 274 aa6.3□□□□□ -1.4
CDKL5-209ENST00000635828 PSMG3Q9BT73 122 aaPredicted RBP6.3□□□□□ -1.4
CDKL5-209ENST00000635828 FRMD6-AS1P0C7T7 363 aa6.29□□□□□ -1.4
CDKL5-209ENST00000635828 CDC34P49427 236 aaPredicted RBP6.29□□□□□ -1.4
CDKL5-209ENST00000635828 RANP62826 216 aaKnown RBP6.29□□□□□ -1.4
CDKL5-209ENST00000635828 SBSPONQ8IVN8 264 aa6.29□□□□□ -1.4
CDKL5-209ENST00000635828 IQCF2Q8IXL9 164 aa6.29□□□□□ -1.4
CDKL5-209ENST00000635828 FAM213BQ8TBF2 198 aa6.29□□□□□ -1.4
CDKL5-209ENST00000635828 NARS2Q96I59 477 aaKnown RBP6.29□□□□□ -1.4
CDKL5-209ENST00000635828 C16orf92Q96LL3 132 aa6.29□□□□□ -1.4
CDKL5-209ENST00000635828 PFDN5Q99471 154 aa6.29□□□□□ -1.4
CDKL5-209ENST00000635828 OR51M1Q9H341 326 aa6.29□□□□□ -1.4
CDKL5-209ENST00000635828 TIMM9Q9Y5J7 89 aa6.29□□□□□ -1.4
CDKL5-209ENST00000635828 DNAH7Q8WXX0 4024 aa6.29□□□□□ -1.4
CDKL5-209ENST00000635828 HELTA6NFD8 242 aa6.29□□□□□ -1.4
CDKL5-209ENST00000635828 TMEM41BQ5BJD5 291 aa6.29□□□□□ -1.4
CDKL5-209ENST00000635828 Q6ZQT7 251 aa6.29□□□□□ -1.4
CDKL5-209ENST00000635828 GTSCR1Q86UQ5 136 aa6.29□□□□□ -1.4
CDKL5-209ENST00000635828 HRH4Q9H3N8 390 aa6.29□□□□□ -1.4
CDKL5-209ENST00000635828 SRD5A3Q9H8P0 318 aa6.29□□□□□ -1.4
CDKL5-209ENST00000635828 CLEC5AQ9NY25 188 aa6.29□□□□□ -1.4
CDKL5-209ENST00000635828 STARD9Q9P2P6 4700 aa6.29□□□□□ -1.4
CDKL5-209ENST00000635828 UBE2G2P60604 165 aa6.29□□□□□ -1.4
CDKL5-209ENST00000635828 ACOT6Q3I5F7 207 aaPredicted RBP6.29□□□□□ -1.4
CDKL5-209ENST00000635828 BPIFA4PQ86YQ2 179 aa6.29□□□□□ -1.4
CDKL5-209ENST00000635828 STOML3Q8TAV4 291 aa6.29□□□□□ -1.4
CDKL5-209ENST00000635828 RNF141Q8WVD5 230 aa6.29□□□□□ -1.4
CDKL5-209ENST00000635828 GRAMD2BQ96HH9 432 aa6.29□□□□□ -1.4
CDKL5-209ENST00000635828 PAXXQ9BUH6 204 aa6.29□□□□□ -1.4
CDKL5-209ENST00000635828 TRBV19A0A075B6N1 114 aa6.28□□□□□ -1.4
CDKL5-209ENST00000635828 A0A1W2PPV4 95 aa6.28□□□□□ -1.4
CDKL5-209ENST00000635828 ATF4P18848 351 aaPredicted RBP6.28□□□□□ -1.4
CDKL5-209ENST00000635828 C1orf194Q5T5A4 169 aa6.28□□□□□ -1.4
CDKL5-209ENST00000635828 ZNF331Q9NQX6 463 aaPredicted RBP6.28□□□□□ -1.4
CDKL5-209ENST00000635828 TPT1P13693 172 aaKnown RBP6.28□□□□□ -1.4
CDKL5-209ENST00000635828 GALR1P47211 349 aa6.28□□□□□ -1.4
CDKL5-209ENST00000635828 GNG5P63218 68 aa6.28□□□□□ -1.4
CDKL5-209ENST00000635828 UBE2L3P68036 154 aaKnown RBP6.28□□□□□ -1.4
CDKL5-209ENST00000635828 ERCC8Q13216 396 aa6.28□□□□□ -1.4
CDKL5-209ENST00000635828 NBEAP1P0C6P0 100 aa6.28□□□□□ -1.4
CDKL5-209ENST00000635828 RPL7P18124 248 aaKnown RBP6.28□□□□□ -1.4
CDKL5-209ENST00000635828 RHOBP62745 196 aa6.28□□□□□ -1.4
CDKL5-209ENST00000635828 SERF2P84101 59 aa6.28□□□□□ -1.4
CDKL5-209ENST00000635828 AKR1C8PQ5T2L2 129 aa6.28□□□□□ -1.4
CDKL5-209ENST00000635828 GNPNAT1Q96EK6 184 aaPredicted RBP6.28□□□□□ -1.4
CDKL5-209ENST00000635828 FAM110AQ9BQ89 295 aa6.28□□□□□ -1.4
CDKL5-209ENST00000635828 STAG3L2P0CL84 134 aa6.27□□□□□ -1.41
CDKL5-209ENST00000635828 STAG3L3P0CL85 134 aa6.27□□□□□ -1.41
CDKL5-209ENST00000635828 SLC51BQ86UW2 128 aa6.27□□□□□ -1.41
CDKL5-209ENST00000635828 SLC35B3Q9H1N7 401 aa6.27□□□□□ -1.41
CDKL5-209ENST00000635828 RPH3ALQ9UNE2 315 aa6.27□□□□□ -1.41
CDKL5-209ENST00000635828 YTHDF2Q9Y5A9 579 aaKnown RBP6.27□□□□□ -1.41
CDKL5-209ENST00000635828 TENM2Q9NT68 2774 aa6.27□□□□□ -1.41
CDKL5-209ENST00000635828 TRAV25A0A0B4J276 109 aa6.27□□□□□ -1.41
CDKL5-209ENST00000635828 OR4C46A6NHA9 309 aa6.27□□□□□ -1.41
CDKL5-209ENST00000635828 J3KRW8 73 aa6.27□□□□□ -1.41
CDKL5-209ENST00000635828 GIG44P09565 113 aaPredicted RBP6.27□□□□□ -1.41
CDKL5-209ENST00000635828 SEC11BP0C7V7 166 aa6.27□□□□□ -1.41
CDKL5-209ENST00000635828 ICAM4Q14773 271 aa6.27□□□□□ -1.41
CDKL5-209ENST00000635828 SFT2D1Q8WV19 159 aa6.27□□□□□ -1.41
CDKL5-209ENST00000635828 LINC00479Q96M42 142 aa6.27□□□□□ -1.41
CDKL5-209ENST00000635828 TMEM231Q9H6L2 316 aa6.27□□□□□ -1.41
CDKL5-209ENST00000635828 IGKV2-40A0A087WW87 121 aaPredicted RBP6.27□□□□□ -1.41
CDKL5-209ENST00000635828 IGKV2D-40P01614 121 aaPredicted RBP6.27□□□□□ -1.41
CDKL5-209ENST00000635828 PAFAH1B2P68402 229 aa6.27□□□□□ -1.41
CDKL5-209ENST00000635828 PXDC1Q5TGL8 231 aa6.27□□□□□ -1.41
CDKL5-209ENST00000635828 TRAV8-1A0A0A6YYK1 113 aa6.26□□□□□ -1.41
CDKL5-209ENST00000635828 OR4B1Q8NGF8 309 aa6.26□□□□□ -1.41
CDKL5-209ENST00000635828 LRRC20Q8TCA0 184 aa6.26□□□□□ -1.41
CDKL5-209ENST00000635828 GGTLC3B5MD39 225 aa6.26□□□□□ -1.41
CDKL5-209ENST00000635828 C4BPBP20851 252 aa6.26□□□□□ -1.41
CDKL5-209ENST00000635828 GCHFRP30047 84 aa6.26□□□□□ -1.41
CDKL5-209ENST00000635828 OR2K2Q8NGT1 345 aa6.26□□□□□ -1.41
CDKL5-209ENST00000635828 TRAV12-2A0A075B6T6 113 aa6.26□□□□□ -1.41
CDKL5-209ENST00000635828 A0A087X0K7 114 aa6.26□□□□□ -1.41
CDKL5-209ENST00000635828 MAP1LC3B2A6NCE7 125 aa6.26□□□□□ -1.41
CDKL5-209ENST00000635828 M0R2Z0 102 aa6.26□□□□□ -1.41
CDKL5-209ENST00000635828 HIST1H1EP10412 219 aaKnown RBP6.26□□□□□ -1.41
CDKL5-209ENST00000635828 ZNF738Q8NE65 137 aa6.26□□□□□ -1.41
CDKL5-209ENST00000635828 Q8TAT8 98 aa6.26□□□□□ -1.41
CDKL5-209ENST00000635828 VGLL1Q99990 258 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms