RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 CDK5R1Q15078 307 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 PMVKQ15126 192 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 KISS1Q15726 138 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 C5orf64Q2M2E5 130 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 ZNF181Q2M3W8 571 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 RPEL1Q2QD12 228 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 ACTBL2Q562R1 376 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 TNFAIP8L3Q5GJ75 292 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 RBM48Q5RL73 367 aaKnown RBP0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 LELP1Q5T871 98 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 ANXA8L1Q5VT79 327 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 GLYATQ6IB77 296 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 LCN8Q6JVE9 175 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 CLPSL2Q6UWE3 100 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 C5orf46Q6UWT4 87 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 DRAM2Q6UX65 266 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 Q6ZQT7 251 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 AHSA2Q719I0 299 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 FA2HQ7L5A8 372 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 C6orf201Q7Z4U5 140 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 TMEM144Q7Z5S9 345 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 CYP4Z1Q86W10 505 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 GPHB5Q86YW7 130 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 WFDC10BQ8IUB3 73 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 BAP18Q8IXM2 172 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 IFT20Q8IY31 132 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 C10orf67Q8IYJ2 551 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 DEFB107AQ8IZN7 70 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 SLC7A5P1Q8MH63 180 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 FAM58AQ8N1B3 248 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 EIF4E3Q8N5X7 224 aaKnown RBP0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 COMMD1Q8N668 190 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 Q8NAQ8 132 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 INO80EQ8NBZ0 244 aaPredicted RBP0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 OR11H6Q8NGC7 330 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 OR10W1Q8NGF6 305 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 OR13D1Q8NGV5 346 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 OR10X1Q8NGY0 326 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 OR10Z1Q8NGY1 313 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 OR52N1Q8NH53 320 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 OR52E5Q8NH55 327 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 OTOSQ8NHW6 89 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 MRPL30Q8TCC3 161 aaKnown RBP0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 ORAOV1Q8WV07 137 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 RNF133Q8WVZ7 376 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 PYDC1Q8WXC3 89 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 DNAJC9Q8WXX5 260 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 ARL11Q969Q4 196 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 SPTSSAQ969W0 71 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 ISOC2Q96AB3 205 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 CENPNQ96H22 339 aaPredicted RBP0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 ATP6V1G3Q96LB4 118 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 UBE2E2Q96LR5 201 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 RBP7Q96R05 134 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 GPER1Q99527 375 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 PHB2Q99623 299 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 CIB1Q99828 191 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 ZNF251Q9BRH9 671 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 TMEM109Q9BVC6 243 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 HINT2Q9BX68 163 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 CHST5Q9GZS9 411 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 SRRQ9GZT4 340 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 GABARAPL1Q9H0R8 117 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 SLC35B3Q9H1N7 401 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 GAL3ST2Q9H3Q3 398 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 AUNIPQ9H7T9 357 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 TUBA4BQ9H853 241 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 REEP1Q9H902 201 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 ABCB9Q9NP78 766 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 SAR1AQ9NR31 198 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 NKIRAS1Q9NYS0 192 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 TAS2R8Q9NYW2 309 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 TVP23BQ9NYZ1 205 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 METTL1Q9UBP6 276 aaKnown RBP0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 KAAG1Q9UBP8 84 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 ENPP5Q9UJA9 477 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 JPT1Q9UK76 154 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 OR52A1Q9UKL2 312 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 KLK9Q9UKQ9 250 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 APLNQ9ULZ1 77 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 HHLA2Q9UM44 414 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 SLC7A11Q9UPY5 501 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 ORC6Q9Y5N6 252 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 LINC00312Q9Y6C7 94 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 ICOSQ9Y6W8 199 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 R4GMQ9 66 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 V9GYS6 101 aa0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 SYNE2Q8WXH0 6885 aaKnown RBP0.48□□□□□ -2.33
SMARCB1-209ENST00000635578 LRP2P98164 4655 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 FAT4Q6V0I7 4981 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 TRAV12-2A0A075B6T6 113 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 MUC21A0A0G2JKD1 596 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 LINC00854A0A1B0GVQ3 168 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 A0A1W2PQL4 384 aaPredicted RBP0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 hADV38S2A0JD32 116 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 IGLC7A0M8Q6 106 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 TMEM30CPA0ZSE6 113 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 GMNCA6NCL1 334 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 A6NED7 52 aa0.47□□□□□ -2.33
SMARCB1-209ENST00000635578 TMEM235A6NFC5 223 aa0.47□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms