RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 IGLL5B9A064 214 aa11.33□□□□□ -0.6
SNRNP48-203ENST00000634363 SOCS3O14543 225 aa11.33□□□□□ -0.6
SNRNP48-203ENST00000634363 Q5BKY6 102 aa11.33□□□□□ -0.6
SNRNP48-203ENST00000634363 ACTL10Q5JWF8 245 aa11.33□□□□□ -0.6
SNRNP48-203ENST00000634363 BPIFA4PQ86YQ2 179 aa11.33□□□□□ -0.6
SNRNP48-203ENST00000634363 KNCNA6PVL3 124 aa11.32□□□□□ -0.6
SNRNP48-203ENST00000634363 ZNF266Q14584 549 aa11.32□□□□□ -0.6
SNRNP48-203ENST00000634363 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.32□□□□□ -0.6
SNRNP48-203ENST00000634363 LRRC20Q8TCA0 184 aa11.32□□□□□ -0.6
SNRNP48-203ENST00000634363 A0A087X0K7 114 aa11.31□□□□□ -0.6
SNRNP48-203ENST00000634363 MORN5Q5VZ52 161 aa11.31□□□□□ -0.6
SNRNP48-203ENST00000634363 PARD6GQ9BYG4 376 aaPredicted RBP11.31□□□□□ -0.6
SNRNP48-203ENST00000634363 C11orf68Q9H3H3 251 aaKnown RBP11.31□□□□□ -0.6
SNRNP48-203ENST00000634363 KMT2AQ03164 3969 aa11.3□□□□□ -0.6
SNRNP48-203ENST00000634363 GCSAMLQ5JQS6 135 aa11.3□□□□□ -0.6
SNRNP48-203ENST00000634363 FAM78BQ5VT40 261 aa11.3□□□□□ -0.6
SNRNP48-203ENST00000634363 LCN15Q6UWW0 184 aa11.3□□□□□ -0.6
SNRNP48-203ENST00000634363 TRPT1Q86TN4 253 aaKnown RBP11.3□□□□□ -0.6
SNRNP48-203ENST00000634363 WFDC1Q9HC57 220 aa11.3□□□□□ -0.6
SNRNP48-203ENST00000634363 RPRMQ9NS64 109 aa11.3□□□□□ -0.6
SNRNP48-203ENST00000634363 TNFSF18Q9UNG2 199 aa11.3□□□□□ -0.6
SNRNP48-203ENST00000634363 MRPS12O15235 138 aaKnown RBP11.29□□□□□ -0.6
SNRNP48-203ENST00000634363 SPP1P10451 314 aa11.29□□□□□ -0.6
SNRNP48-203ENST00000634363 CXCL2P19875 107 aa11.29□□□□□ -0.6
SNRNP48-203ENST00000634363 FFAR4Q5NUL3 377 aa11.29□□□□□ -0.6
SNRNP48-203ENST00000634363 EBLN2Q6P2I7 272 aa11.29□□□□□ -0.6
SNRNP48-203ENST00000634363 MORN3Q6PF18 240 aaPredicted RBP11.29□□□□□ -0.6
SNRNP48-203ENST00000634363 FOXI2Q6ZQN5 318 aa11.29□□□□□ -0.6
SNRNP48-203ENST00000634363 APLNQ9ULZ1 77 aa11.29□□□□□ -0.6
SNRNP48-203ENST00000634363 TRAV5A0A0B4J249 113 aa11.28□□□□□ -0.6
SNRNP48-203ENST00000634363 RNF222A6NCQ9 220 aa11.28□□□□□ -0.6
SNRNP48-203ENST00000634363 ARPC5O15511 151 aa11.28□□□□□ -0.6
SNRNP48-203ENST00000634363 HLA-DRB4P13762 266 aa11.28□□□□□ -0.6
SNRNP48-203ENST00000634363 TCTAP57738 103 aa11.28□□□□□ -0.6
SNRNP48-203ENST00000634363 SPATA31B1PQ5VZV4 182 aa11.28□□□□□ -0.6
SNRNP48-203ENST00000634363 C17orf77Q96MU5 243 aa11.28□□□□□ -0.6
SNRNP48-203ENST00000634363 SLC50A1Q9BRV3 221 aa11.28□□□□□ -0.6
SNRNP48-203ENST00000634363 MRPL32Q9BYC8 188 aaKnown RBP11.28□□□□□ -0.6
SNRNP48-203ENST00000634363 HRH4Q9H3N8 390 aa11.28□□□□□ -0.6
SNRNP48-203ENST00000634363 SAV1Q9H4B6 383 aaPredicted RBP11.28□□□□□ -0.6
SNRNP48-203ENST00000634363 HLA-DRB4X5D2U9 266 aa11.28□□□□□ -0.6
SNRNP48-203ENST00000634363 G3V3Q6 166 aa11.27□□□□□ -0.61
SNRNP48-203ENST00000634363 H3BMM0 161 aa11.27□□□□□ -0.61
SNRNP48-203ENST00000634363 SMLR1H3BR10 107 aa11.27□□□□□ -0.61
SNRNP48-203ENST00000634363 SNRPCP09234 159 aaKnown RBP11.27□□□□□ -0.61
SNRNP48-203ENST00000634363 NUTF2P61970 127 aaKnown RBP11.27□□□□□ -0.61
SNRNP48-203ENST00000634363 GUK1Q16774 197 aa11.27□□□□□ -0.61
SNRNP48-203ENST00000634363 TMEM41BQ5BJD5 291 aa11.27□□□□□ -0.61
SNRNP48-203ENST00000634363 RNF182Q8N6D2 247 aa11.27□□□□□ -0.61
SNRNP48-203ENST00000634363 ZNF738Q8NE65 137 aa11.27□□□□□ -0.61
SNRNP48-203ENST00000634363 C20orf173Q96LM9 149 aa11.27□□□□□ -0.61
SNRNP48-203ENST00000634363 TIMM9Q9Y5J7 89 aa11.27□□□□□ -0.61
SNRNP48-203ENST00000634363 AGRNO00468 2067 aa11.27□□□□□ -0.61
SNRNP48-203ENST00000634363 BORCS7-ASMTA0A0B4J1R7 106 aa11.26□□□□□ -0.61
SNRNP48-203ENST00000634363 TRAV8-2A0A0B4J237 113 aa11.26□□□□□ -0.61
SNRNP48-203ENST00000634363 C11orf94C9JXX5 98 aa11.26□□□□□ -0.61
SNRNP48-203ENST00000634363 IGLC2P0DOY2 106 aa11.26□□□□□ -0.61
SNRNP48-203ENST00000634363 DEFB1P60022 68 aa11.26□□□□□ -0.61
SNRNP48-203ENST00000634363 GDF5OSQ5U4N7 250 aa11.26□□□□□ -0.61
SNRNP48-203ENST00000634363 IGFL4Q6B9Z1 124 aa11.26□□□□□ -0.61
SNRNP48-203ENST00000634363 MIR17HGQ75NE6 70 aa11.26□□□□□ -0.61
SNRNP48-203ENST00000634363 HSD17B11Q8NBQ5 300 aa11.26□□□□□ -0.61
SNRNP48-203ENST00000634363 OR4B1Q8NGF8 309 aa11.26□□□□□ -0.61
SNRNP48-203ENST00000634363 TMEM14CQ9P0S9 112 aa11.26□□□□□ -0.61
SNRNP48-203ENST00000634363 FUT9Q9Y231 359 aa11.26□□□□□ -0.61
SNRNP48-203ENST00000634363 IGHV4-28A0A0C4DH34 117 aa11.25□□□□□ -0.61
SNRNP48-203ENST00000634363 F6UB75 175 aa11.25□□□□□ -0.61
SNRNP48-203ENST00000634363 H3BTX0 84 aa11.25□□□□□ -0.61
SNRNP48-203ENST00000634363 IGKV3-20P01619 116 aa11.25□□□□□ -0.61
SNRNP48-203ENST00000634363 RBMY1A1P0DJD3 496 aaKnown RBP11.25□□□□□ -0.61
SNRNP48-203ENST00000634363 RBMY1CP0DJD4 496 aa11.25□□□□□ -0.61
SNRNP48-203ENST00000634363 HLA-DMBP28068 263 aa11.25□□□□□ -0.61
SNRNP48-203ENST00000634363 RHOBP62745 196 aa11.25□□□□□ -0.61
SNRNP48-203ENST00000634363 RBMY1FQ15415 496 aaKnown RBP11.25□□□□□ -0.61
SNRNP48-203ENST00000634363 ACOT6Q3I5F7 207 aaPredicted RBP11.25□□□□□ -0.61
SNRNP48-203ENST00000634363 Q8NAQ8 132 aa11.25□□□□□ -0.61
SNRNP48-203ENST00000634363 SLC25A2Q9BXI2 301 aa11.25□□□□□ -0.61
SNRNP48-203ENST00000634363 ZNF331Q9NQX6 463 aaPredicted RBP11.25□□□□□ -0.61
SNRNP48-203ENST00000634363 A0A0J9YX75 114 aa11.24□□□□□ -0.61
SNRNP48-203ENST00000634363 H3BQ15 152 aa11.24□□□□□ -0.61
SNRNP48-203ENST00000634363 SLC17A3O00476 420 aa11.24□□□□□ -0.61
SNRNP48-203ENST00000634363 OR7C2O60412 319 aa11.24□□□□□ -0.61
SNRNP48-203ENST00000634363 HIST1H1EP10412 219 aaKnown RBP11.24□□□□□ -0.61
SNRNP48-203ENST00000634363 C4BPBP20851 252 aa11.24□□□□□ -0.61
SNRNP48-203ENST00000634363 TAS2R45P59539 299 aa11.24□□□□□ -0.61
SNRNP48-203ENST00000634363 PSG3Q16557 428 aa11.24□□□□□ -0.61
SNRNP48-203ENST00000634363 Q6ZNX1 250 aa11.24□□□□□ -0.61
SNRNP48-203ENST00000634363 PSMG3Q9BT73 122 aaPredicted RBP11.24□□□□□ -0.61
SNRNP48-203ENST00000634363 C1QTNF4Q9BXJ3 329 aa11.24□□□□□ -0.61
SNRNP48-203ENST00000634363 ZNF586Q9NXT0 402 aa11.24□□□□□ -0.61
SNRNP48-203ENST00000634363 CLEC5AQ9NY25 188 aa11.24□□□□□ -0.61
SNRNP48-203ENST00000634363 TAAR5O14804 337 aa11.23□□□□□ -0.61
SNRNP48-203ENST00000634363 DUSP14O95147 198 aaKnown RBP11.23□□□□□ -0.61
SNRNP48-203ENST00000634363 PYYP10082 97 aa11.23□□□□□ -0.61
SNRNP48-203ENST00000634363 M6PRP20645 277 aa11.23□□□□□ -0.61
SNRNP48-203ENST00000634363 ATP6V0CP27449 155 aa11.23□□□□□ -0.61
SNRNP48-203ENST00000634363 KHDC3LQ587J8 217 aa11.23□□□□□ -0.61
SNRNP48-203ENST00000634363 RPL7L1Q6DKI1 246 aaKnown RBP11.23□□□□□ -0.61
SNRNP48-203ENST00000634363 Q6ZTC4 211 aa11.23□□□□□ -0.61
SNRNP48-203ENST00000634363 RPUSD4Q96CM3 377 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms