RNA–Protein interactions for RNA: ENST00000628018.2

CAPNS1-215, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-215ENST00000628018 SVBPQ8N300 66 aa18.96■□□□□ 0.63
CAPNS1-215ENST00000628018 TCEAL7Q9BRU2 100 aa18.96■□□□□ 0.63
CAPNS1-215ENST00000628018 OTORQ9NRC9 128 aa18.96■□□□□ 0.63
CAPNS1-215ENST00000628018 SMPXQ9UHP9 88 aa18.96■□□□□ 0.63
CAPNS1-215ENST00000628018 FAM74A3Q4VXF1 159 aa18.95■□□□□ 0.62
CAPNS1-215ENST00000628018 SIGLEC15Q6ZMC9 328 aa18.95■□□□□ 0.62
CAPNS1-215ENST00000628018 C8orf86Q6ZUL3 223 aa18.95■□□□□ 0.62
CAPNS1-215ENST00000628018 DPF1Q92782 380 aa18.95■□□□□ 0.62
CAPNS1-215ENST00000628018 GRAMD2BQ96HH9 432 aa18.95■□□□□ 0.62
CAPNS1-215ENST00000628018 A0A1B0GUS0 222 aa18.95■□□□□ 0.62
CAPNS1-215ENST00000628018 TMEM213A2RRL7 107 aa18.95■□□□□ 0.62
CAPNS1-215ENST00000628018 ZNF727A8MUV8 499 aa18.95■□□□□ 0.62
CAPNS1-215ENST00000628018 SLURP1P55000 103 aa18.95■□□□□ 0.62
CAPNS1-215ENST00000628018 SMIM7Q9BQ49 75 aa18.95■□□□□ 0.62
CAPNS1-215ENST00000628018 RHPN1-AS1Q9BWJ2 59 aa18.95■□□□□ 0.62
CAPNS1-215ENST00000628018 ZNF785A8K8V0 405 aa18.94■□□□□ 0.62
CAPNS1-215ENST00000628018 CHEK1O14757 476 aa18.94■□□□□ 0.62
CAPNS1-215ENST00000628018 ZNF253O75346 499 aa18.94■□□□□ 0.62
CAPNS1-215ENST00000628018 ZNF674Q2M3X9 581 aa18.94■□□□□ 0.62
CAPNS1-215ENST00000628018 EXOC3-AS1Q8N2X6 119 aa18.94■□□□□ 0.62
CAPNS1-215ENST00000628018 NIPSNAP3BQ9BS92 247 aa18.94■□□□□ 0.62
CAPNS1-215ENST00000628018 DERL1Q9BUN8 251 aa18.94■□□□□ 0.62
CAPNS1-215ENST00000628018 SLC25A5P05141 298 aaKnown RBP18.93■□□□□ 0.62
CAPNS1-215ENST00000628018 EDN2P20800 178 aa18.93■□□□□ 0.62
CAPNS1-215ENST00000628018 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa18.93■□□□□ 0.62
CAPNS1-215ENST00000628018 C5orf17Q8NAS9 161 aa18.93■□□□□ 0.62
CAPNS1-215ENST00000628018 C2CD4CQ8TF44 421 aa18.93■□□□□ 0.62
CAPNS1-215ENST00000628018 DUX3Q96PT4 197 aa18.93■□□□□ 0.62
CAPNS1-215ENST00000628018 EPDR1Q9UM22 224 aa18.93■□□□□ 0.62
CAPNS1-215ENST00000628018 PSG9Q00887 426 aa18.92■□□□□ 0.62
CAPNS1-215ENST00000628018 HIST1H2BAQ96A08 127 aa18.92■□□□□ 0.62
CAPNS1-215ENST00000628018 A0A1W2PRX2 142 aa18.91■□□□□ 0.62
CAPNS1-215ENST00000628018 SNAPINO95295 136 aa18.91■□□□□ 0.62
CAPNS1-215ENST00000628018 KRTAP10-3P60369 221 aa18.91■□□□□ 0.62
CAPNS1-215ENST00000628018 RAX2Q96IS3 184 aa18.91■□□□□ 0.62
CAPNS1-215ENST00000628018 PEX7O00628 323 aa18.9■□□□□ 0.62
CAPNS1-215ENST00000628018 MEOX2P50222 304 aa18.9■□□□□ 0.62
CAPNS1-215ENST00000628018 GNG5P63218 68 aa18.9■□□□□ 0.62
CAPNS1-215ENST00000628018 FHL3Q13643 280 aa18.9■□□□□ 0.62
CAPNS1-215ENST00000628018 ATRAIDQ6UW56 229 aa18.9■□□□□ 0.62
CAPNS1-215ENST00000628018 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP18.9■□□□□ 0.62
CAPNS1-215ENST00000628018 CLRN3Q8NCR9 226 aa18.9■□□□□ 0.62
CAPNS1-215ENST00000628018 TVP23CQ96ET8 276 aa18.9■□□□□ 0.62
CAPNS1-215ENST00000628018 C2CD3Q4AC94 2353 aa18.9■□□□□ 0.62
CAPNS1-215ENST00000628018 AAMDCQ9H7C9 122 aa18.9■□□□□ 0.62
CAPNS1-215ENST00000628018 SDF2L1Q9HCN8 221 aa18.9■□□□□ 0.62
CAPNS1-215ENST00000628018 ZNF331Q9NQX6 463 aaPredicted RBP18.9■□□□□ 0.62
CAPNS1-215ENST00000628018 NAT8Q9UHE5 227 aa18.9■□□□□ 0.62
CAPNS1-215ENST00000628018 ADARB2-AS1A8MUL3 147 aa18.89■□□□□ 0.61
CAPNS1-215ENST00000628018 BMI1P35226 326 aa18.89■□□□□ 0.61
CAPNS1-215ENST00000628018 RPL35P42766 123 aaKnown RBP18.89■□□□□ 0.61
CAPNS1-215ENST00000628018 TMEM241Q24JQ0 296 aa18.89■□□□□ 0.61
CAPNS1-215ENST00000628018 HELTA6NFD8 242 aa18.88■□□□□ 0.61
CAPNS1-215ENST00000628018 C2orf70A6NJV1 201 aa18.88■□□□□ 0.61
CAPNS1-215ENST00000628018 CCL24O00175 119 aa18.88■□□□□ 0.61
CAPNS1-215ENST00000628018 TCRAP04437 139 aa18.88■□□□□ 0.61
CAPNS1-215ENST00000628018 CMTM2Q8TAZ6 248 aa18.88■□□□□ 0.61
CAPNS1-215ENST00000628018 DLX4Q92988 240 aaPredicted RBP18.88■□□□□ 0.61
CAPNS1-215ENST00000628018 SLC50A1Q9BRV3 221 aa18.88■□□□□ 0.61
CAPNS1-215ENST00000628018 ATG101Q9BSB4 218 aa18.88■□□□□ 0.61
CAPNS1-215ENST00000628018 TRBV20OR9-2A0A075B6H5 130 aa18.87■□□□□ 0.61
CAPNS1-215ENST00000628018 CBLN1P23435 193 aa18.87■□□□□ 0.61
CAPNS1-215ENST00000628018 AKR1C3P42330 323 aa18.87■□□□□ 0.61
CAPNS1-215ENST00000628018 PNRC1Q12796 327 aaPredicted RBP18.87■□□□□ 0.61
CAPNS1-215ENST00000628018 FOXL1Q12952 345 aa18.87■□□□□ 0.61
CAPNS1-215ENST00000628018 AWAT1Q58HT5 328 aa18.86■□□□□ 0.61
CAPNS1-215ENST00000628018 SETD2Q9BYW2 2564 aaPredicted RBP18.86■□□□□ 0.61
CAPNS1-215ENST00000628018 NIPBLQ6KC79 2804 aaeCLIP18.86■□□□□ 0.61
CAPNS1-215ENST00000628018 C9JCJ5 164 aa18.85■□□□□ 0.61
CAPNS1-215ENST00000628018 M0R036 132 aa18.85■□□□□ 0.61
CAPNS1-215ENST00000628018 M0R3E3 92 aa18.85■□□□□ 0.61
CAPNS1-215ENST00000628018 ARL6IP6Q8N6S5 226 aa18.85■□□□□ 0.61
CAPNS1-215ENST00000628018 OR9G4Q8NGQ1 327 aa18.85■□□□□ 0.61
CAPNS1-215ENST00000628018 LINC00479Q96M42 142 aa18.85■□□□□ 0.61
CAPNS1-215ENST00000628018 PEMTQ9UBM1 199 aa18.85■□□□□ 0.61
CAPNS1-215ENST00000628018 RPH3ALQ9UNE2 315 aa18.85■□□□□ 0.61
CAPNS1-215ENST00000628018 KLF12Q9Y4X4 402 aa18.85■□□□□ 0.61
CAPNS1-215ENST00000628018 FOLR2P14207 255 aa18.84■□□□□ 0.61
CAPNS1-215ENST00000628018 CNN1P51911 297 aaKnown RBP18.84■□□□□ 0.61
CAPNS1-215ENST00000628018 IGFL4Q6B9Z1 124 aa18.84■□□□□ 0.61
CAPNS1-215ENST00000628018 ADAMTSL5Q6ZMM2 481 aa18.84■□□□□ 0.61
CAPNS1-215ENST00000628018 TCF24Q7RTU0 167 aa18.84■□□□□ 0.61
CAPNS1-215ENST00000628018 TRAV8-2A0A0B4J237 113 aa18.84■□□□□ 0.61
CAPNS1-215ENST00000628018 SCO1O75880 301 aa18.84■□□□□ 0.61
CAPNS1-215ENST00000628018 TAS2R60P59551 318 aa18.84■□□□□ 0.61
CAPNS1-215ENST00000628018 RPL23P62829 140 aaKnown RBP18.84■□□□□ 0.61
CAPNS1-215ENST00000628018 NDUFA11Q86Y39 141 aa18.84■□□□□ 0.61
CAPNS1-215ENST00000628018 NRN1Q9NPD7 142 aa18.84■□□□□ 0.61
CAPNS1-215ENST00000628018 DIRC3C9JPN6 131 aa18.83■□□□□ 0.6
CAPNS1-215ENST00000628018 HLA-DMBP28068 263 aa18.83■□□□□ 0.6
CAPNS1-215ENST00000628018 TMEM183BQ1AE95 376 aa18.83■□□□□ 0.6
CAPNS1-215ENST00000628018 IGF2BP2-AS1Q96M15 143 aa18.83■□□□□ 0.6
CAPNS1-215ENST00000628018 TRAV34A0A0B4J273 112 aa18.82■□□□□ 0.6
CAPNS1-215ENST00000628018 SOCS3O14543 225 aa18.82■□□□□ 0.6
CAPNS1-215ENST00000628018 RPL11P62913 178 aaKnown RBP18.82■□□□□ 0.6
CAPNS1-215ENST00000628018 NSUN5P1Q3KNT7 163 aa18.82■□□□□ 0.6
CAPNS1-215ENST00000628018 LINC01551Q86U37 167 aa18.82■□□□□ 0.6
CAPNS1-215ENST00000628018 PRELID1Q9Y255 219 aa18.82■□□□□ 0.6
CAPNS1-215ENST00000628018 C7orf77A4D0Y5 90 aa18.81■□□□□ 0.6
CAPNS1-215ENST00000628018 PGPEP1LA6NFU8 196 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms