RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 OSTCQ9NRP0 149 aa8.93□□□□□ -0.98
VPS8-227ENST00000625842 DOCK5Q9H7D0 1870 aa8.92□□□□□ -0.98
VPS8-227ENST00000625842 LTBP1Q14766 1721 aa8.92□□□□□ -0.98
VPS8-227ENST00000625842 F8W735 103 aaPredicted RBP8.92□□□□□ -0.98
VPS8-227ENST00000625842 C8orf31Q8N9H6 132 aa8.92□□□□□ -0.98
VPS8-227ENST00000625842 C18orf15Q96N68 181 aa8.92□□□□□ -0.98
VPS8-227ENST00000625842 WFDC6Q9BQY6 131 aa8.92□□□□□ -0.98
VPS8-227ENST00000625842 PYGO2Q9BRQ0 406 aa8.92□□□□□ -0.98
VPS8-227ENST00000625842 C11orf68Q9H3H3 251 aaKnown RBP8.92□□□□□ -0.98
VPS8-227ENST00000625842 LIME1Q9H400 295 aa8.92□□□□□ -0.98
VPS8-227ENST00000625842 MYO5AQ9Y4I1 1855 aaKnown RBP8.92□□□□□ -0.98
VPS8-227ENST00000625842 FOCADQ5VW36 1801 aa8.92□□□□□ -0.98
VPS8-227ENST00000625842 IGHV3-73A0A0B4J1V6 119 aa8.92□□□□□ -0.98
VPS8-227ENST00000625842 HBDP02042 147 aa8.92□□□□□ -0.98
VPS8-227ENST00000625842 CD300EQ496F6 205 aaPredicted RBP8.92□□□□□ -0.98
VPS8-227ENST00000625842 IGKV1OR2-108A0A075B7D4 117 aa8.92□□□□□ -0.98
VPS8-227ENST00000625842 IGKV1-9A0A0C4DH69 117 aa8.92□□□□□ -0.98
VPS8-227ENST00000625842 ETV2O00321 342 aaPredicted RBP8.92□□□□□ -0.98
VPS8-227ENST00000625842 ARL6IP6Q8N6S5 226 aa8.92□□□□□ -0.98
VPS8-227ENST00000625842 SLC25A2Q9BXI2 301 aa8.92□□□□□ -0.98
VPS8-227ENST00000625842 GAGE10A6NGK3 116 aa8.92□□□□□ -0.98
VPS8-227ENST00000625842 ATP5L2Q7Z4Y8 100 aa8.92□□□□□ -0.98
VPS8-227ENST00000625842 C16orf74Q96GX8 76 aa8.92□□□□□ -0.98
VPS8-227ENST00000625842 HSPB9Q9BQS6 159 aa8.92□□□□□ -0.98
VPS8-227ENST00000625842 SHANK2-AS3Q9BTD1 123 aa8.92□□□□□ -0.98
VPS8-227ENST00000625842 HEATR1Q9H583 2144 aaKnown RBP8.92□□□□□ -0.98
VPS8-227ENST00000625842 ANGP03950 147 aaKnown RBP8.91□□□□□ -0.98
VPS8-227ENST00000625842 ZNF506Q5JVG8 444 aa8.91□□□□□ -0.98
VPS8-227ENST00000625842 C8orf86Q6ZUL3 223 aa8.91□□□□□ -0.98
VPS8-227ENST00000625842 LAMTOR3Q9UHA4 124 aa8.91□□□□□ -0.98
VPS8-227ENST00000625842 NMSQ5H8A3 153 aa8.91□□□□□ -0.98
VPS8-227ENST00000625842 SNHG12Q9BXW3 62 aa8.91□□□□□ -0.98
VPS8-227ENST00000625842 LEPROTO15243 131 aa8.91□□□□□ -0.98
VPS8-227ENST00000625842 SPINK13Q1W4C9 94 aa8.91□□□□□ -0.98
VPS8-227ENST00000625842 TRAV13-1A0A0B4J241 112 aa8.91□□□□□ -0.98
VPS8-227ENST00000625842 PLA2G2AP14555 144 aa8.91□□□□□ -0.98
VPS8-227ENST00000625842 LAGE3Q14657 143 aa8.91□□□□□ -0.98
VPS8-227ENST00000625842 ZNF503Q96F45 646 aa8.91□□□□□ -0.98
VPS8-227ENST00000625842 HIGD1CA8MV81 97 aa8.9□□□□□ -0.98
VPS8-227ENST00000625842 G3V318 75 aa8.9□□□□□ -0.98
VPS8-227ENST00000625842 OTX1P32242 354 aaPredicted RBP8.9□□□□□ -0.98
VPS8-227ENST00000625842 SCRT1Q9BWW7 348 aa8.9□□□□□ -0.98
VPS8-227ENST00000625842 THSD7BQ9C0I4 1608 aa8.9□□□□□ -0.98
VPS8-227ENST00000625842 IGKV2-40A0A087WW87 121 aaPredicted RBP8.9□□□□□ -0.98
VPS8-227ENST00000625842 IGKV1D-13A0A0B4J2D9 117 aa8.9□□□□□ -0.98
VPS8-227ENST00000625842 DPM2O94777 84 aa8.9□□□□□ -0.98
VPS8-227ENST00000625842 IGKV2D-40P01614 121 aaPredicted RBP8.9□□□□□ -0.98
VPS8-227ENST00000625842 IGKV1-13P0DP09 117 aa8.9□□□□□ -0.98
VPS8-227ENST00000625842 SFTA2Q6UW10 78 aa8.9□□□□□ -0.98
VPS8-227ENST00000625842 COQ2Q96H96 371 aa8.9□□□□□ -0.98
VPS8-227ENST00000625842 LAMTOR2Q9Y2Q5 125 aa8.9□□□□□ -0.98
VPS8-227ENST00000625842 CHTOPQ9Y3Y2 248 aaKnown RBP8.9□□□□□ -0.98
VPS8-227ENST00000625842 Q6P435 159 aa8.9□□□□□ -0.99
VPS8-227ENST00000625842 Q6ZS49 121 aa8.9□□□□□ -0.99
VPS8-227ENST00000625842 TBX6O95947 436 aaPredicted RBP8.9□□□□□ -0.99
VPS8-227ENST00000625842 A0A1B0GW64 132 aa8.89□□□□□ -0.99
VPS8-227ENST00000625842 C15orf62A8K5M9 175 aa8.89□□□□□ -0.99
VPS8-227ENST00000625842 TFF1P04155 84 aa8.89□□□□□ -0.99
VPS8-227ENST00000625842 PYYP10082 97 aa8.89□□□□□ -0.99
VPS8-227ENST00000625842 PAX2Q02962 417 aa8.89□□□□□ -0.99
VPS8-227ENST00000625842 PRR31Q5SQ13 230 aa8.89□□□□□ -0.99
VPS8-227ENST00000625842 ZFP36P26651 326 aaKnown RBP8.89□□□□□ -0.99
VPS8-227ENST00000625842 FOXA3P55318 350 aaPredicted RBP8.89□□□□□ -0.99
VPS8-227ENST00000625842 ID3Q02535 119 aa8.89□□□□□ -0.99
VPS8-227ENST00000625842 PRIMA1Q86XR5 153 aa8.89□□□□□ -0.99
VPS8-227ENST00000625842 SCN5AQ14524 2016 aa8.89□□□□□ -0.99
VPS8-227ENST00000625842 IGHV1-24A0A0C4DH33 117 aa8.89□□□□□ -0.99
VPS8-227ENST00000625842 SMIM2Q9BVW6 85 aa8.89□□□□□ -0.99
VPS8-227ENST00000625842 MUC21A0A0G2JKD1 596 aa8.89□□□□□ -0.99
VPS8-227ENST00000625842 MUC21A0A140T8X8 626 aa8.89□□□□□ -0.99
VPS8-227ENST00000625842 PLA2G10O15496 165 aa8.89□□□□□ -0.99
VPS8-227ENST00000625842 TCRAP04437 139 aa8.89□□□□□ -0.99
VPS8-227ENST00000625842 OR11H6Q8NGC7 330 aa8.89□□□□□ -0.99
VPS8-227ENST00000625842 DOCK10Q96BY6 2186 aa8.88□□□□□ -0.99
VPS8-227ENST00000625842 CENPVL3A0A0U1RRI6 287 aa8.88□□□□□ -0.99
VPS8-227ENST00000625842 ZNF833PQ6ZTB9 187 aa8.88□□□□□ -0.99
VPS8-227ENST00000625842 LSM4Q9Y4Z0 139 aaKnown RBP8.88□□□□□ -0.99
VPS8-227ENST00000625842 INAFM1C9JVW0 142 aa8.88□□□□□ -0.99
VPS8-227ENST00000625842 HOXB4P17483 251 aaPredicted RBP8.88□□□□□ -0.99
VPS8-227ENST00000625842 CXCL3P19876 107 aa8.88□□□□□ -0.99
VPS8-227ENST00000625842 UQCR10Q9UDW1 63 aa8.88□□□□□ -0.99
VPS8-227ENST00000625842 OTOFQ9HC10 1997 aa8.88□□□□□ -0.99
VPS8-227ENST00000625842 SCO2A0A1W2PP80 73 aa8.88□□□□□ -0.99
VPS8-227ENST00000625842 SPNP16150 400 aa8.88□□□□□ -0.99
VPS8-227ENST00000625842 CFHR3Q02985 330 aa8.88□□□□□ -0.99
VPS8-227ENST00000625842 ARHGEF17Q96PE2 2063 aaPredicted RBP8.87□□□□□ -0.99
VPS8-227ENST00000625842 IGKV1-12A0A0C4DH73 117 aa8.87□□□□□ -0.99
VPS8-227ENST00000625842 IGKV1D-12P01611 117 aa8.87□□□□□ -0.99
VPS8-227ENST00000625842 GNG5P63218 68 aa8.87□□□□□ -0.99
VPS8-227ENST00000625842 NDUFA3O95167 84 aa8.87□□□□□ -0.99
VPS8-227ENST00000625842 RPP25LQ8N5L8 163 aaKnown RBP8.87□□□□□ -0.99
VPS8-227ENST00000625842 Q9HAA7 133 aa8.87□□□□□ -0.99
VPS8-227ENST00000625842 M0R2P5 195 aa8.87□□□□□ -0.99
VPS8-227ENST00000625842 ZNF25P17030 456 aaPredicted RBP8.87□□□□□ -0.99
VPS8-227ENST00000625842 FANCD2OSQ96PS1 177 aa8.87□□□□□ -0.99
VPS8-227ENST00000625842 NDUFAF3Q9BU61 184 aa8.87□□□□□ -0.99
VPS8-227ENST00000625842 CKAP5Q14008 2032 aa8.87□□□□□ -0.99
VPS8-227ENST00000625842 PTPN13Q12923 2485 aa8.87□□□□□ -0.99
VPS8-227ENST00000625842 A0A1B0GWB2 263 aa8.86□□□□□ -0.99
VPS8-227ENST00000625842 H3BMM0 161 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms