RNA–Protein interactions for RNA: ENST00000625275.2

R3HCC1-210, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-210ENST00000625275 MRPS12O15235 138 aaKnown RBP14.82□□□□□ -0.04
R3HCC1-210ENST00000625275 EIF3GO75821 320 aaKnown RBP eCLIP14.82□□□□□ -0.04
R3HCC1-210ENST00000625275 GALR1P47211 349 aa14.82□□□□□ -0.04
R3HCC1-210ENST00000625275 AKR1C8PQ5T2L2 129 aa14.82□□□□□ -0.04
R3HCC1-210ENST00000625275 STXBP6Q8NFX7 210 aa14.82□□□□□ -0.04
R3HCC1-210ENST00000625275 FAM167A-AS1Q96KT0 104 aa14.82□□□□□ -0.04
R3HCC1-210ENST00000625275 SPAG8Q99932 426 aaPredicted RBP14.82□□□□□ -0.04
R3HCC1-210ENST00000625275 SLC25A2Q9BXI2 301 aa14.82□□□□□ -0.04
R3HCC1-210ENST00000625275 MS4A6AQ9H2W1 248 aa14.82□□□□□ -0.04
R3HCC1-210ENST00000625275 BPIFA4PQ86YQ2 179 aa14.81□□□□□ -0.04
R3HCC1-210ENST00000625275 C17orf77Q96MU5 243 aa14.81□□□□□ -0.04
R3HCC1-210ENST00000625275 A0A1W2PPV4 95 aa14.8□□□□□ -0.04
R3HCC1-210ENST00000625275 TFPI2P48307 235 aa14.8□□□□□ -0.04
R3HCC1-210ENST00000625275 CDC34P49427 236 aaPredicted RBP14.8□□□□□ -0.04
R3HCC1-210ENST00000625275 NRN1Q9NPD7 142 aa14.8□□□□□ -0.04
R3HCC1-210ENST00000625275 EIF5AL1Q6IS14 154 aaKnown RBP14.79□□□□□ -0.04
R3HCC1-210ENST00000625275 DCANP1Q8TF63 244 aa14.79□□□□□ -0.04
R3HCC1-210ENST00000625275 RAB24Q969Q5 203 aa14.79□□□□□ -0.04
R3HCC1-210ENST00000625275 STARD9Q9P2P6 4700 aa14.79□□□□□ -0.04
R3HCC1-210ENST00000625275 UMAD1C9J7I0 102 aa14.78□□□□□ -0.04
R3HCC1-210ENST00000625275 HMGB3O15347 200 aaKnown RBP14.78□□□□□ -0.04
R3HCC1-210ENST00000625275 SNRPCP09234 159 aaKnown RBP14.78□□□□□ -0.04
R3HCC1-210ENST00000625275 IGLC2P0DOY2 106 aa14.78□□□□□ -0.04
R3HCC1-210ENST00000625275 PYYP10082 97 aa14.78□□□□□ -0.04
R3HCC1-210ENST00000625275 ATF4P18848 351 aaPredicted RBP14.78□□□□□ -0.04
R3HCC1-210ENST00000625275 PAFAH1B2P68402 229 aa14.78□□□□□ -0.04
R3HCC1-210ENST00000625275 ZNF726P1Q15940 193 aa14.78□□□□□ -0.04
R3HCC1-210ENST00000625275 SSX7Q7RTT5 188 aa14.78□□□□□ -0.04
R3HCC1-210ENST00000625275 WFDC3Q8IUB2 231 aa14.78□□□□□ -0.04
R3HCC1-210ENST00000625275 ACTR3CQ9C0K3 210 aaPredicted RBP14.78□□□□□ -0.04
R3HCC1-210ENST00000625275 TMEM14CQ9P0S9 112 aa14.78□□□□□ -0.04
R3HCC1-210ENST00000625275 OR4C46A6NHA9 309 aa14.77□□□□□ -0.04
R3HCC1-210ENST00000625275 K7EQG2 157 aa14.77□□□□□ -0.04
R3HCC1-210ENST00000625275 DNASE2O00115 360 aaPredicted RBP14.77□□□□□ -0.04
R3HCC1-210ENST00000625275 FHITP49789 147 aa14.77□□□□□ -0.04
R3HCC1-210ENST00000625275 TAS2R45P59539 299 aa14.77□□□□□ -0.04
R3HCC1-210ENST00000625275 KHDC3LQ587J8 217 aa14.77□□□□□ -0.04
R3HCC1-210ENST00000625275 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.77□□□□□ -0.04
R3HCC1-210ENST00000625275 ZNF503Q96F45 646 aa14.77□□□□□ -0.04
R3HCC1-210ENST00000625275 A0A087X0K7 114 aa14.76□□□□□ -0.05
R3HCC1-210ENST00000625275 TRAV2A0A0B4J234 112 aa14.76□□□□□ -0.05
R3HCC1-210ENST00000625275 H3BQ15 152 aa14.76□□□□□ -0.05
R3HCC1-210ENST00000625275 OR7C2O60412 319 aa14.76□□□□□ -0.05
R3HCC1-210ENST00000625275 FAM24BQ8N5W8 94 aa14.76□□□□□ -0.05
R3HCC1-210ENST00000625275 OR51M1Q9H341 326 aa14.76□□□□□ -0.05
R3HCC1-210ENST00000625275 HRH4Q9H3N8 390 aa14.76□□□□□ -0.05
R3HCC1-210ENST00000625275 SOCS3O14543 225 aa14.76□□□□□ -0.05
R3HCC1-210ENST00000625275 IL17DQ8TAD2 202 aa14.76□□□□□ -0.05
R3HCC1-210ENST00000625275 PHYHIPLQ96FC7 376 aa14.76□□□□□ -0.05
R3HCC1-210ENST00000625275 PAXXQ9BUH6 204 aa14.76□□□□□ -0.05
R3HCC1-210ENST00000625275 SACSQ9NZJ4 4579 aa14.76□□□□□ -0.05
R3HCC1-210ENST00000625275 CTXND1A0A1B0GTU2 59 aa14.75□□□□□ -0.05
R3HCC1-210ENST00000625275 H3BTX0 84 aa14.75□□□□□ -0.05
R3HCC1-210ENST00000625275 OR10J4P0C629 311 aa14.75□□□□□ -0.05
R3HCC1-210ENST00000625275 STAG3L2P0CL84 134 aa14.75□□□□□ -0.05
R3HCC1-210ENST00000625275 STAG3L3P0CL85 134 aa14.75□□□□□ -0.05
R3HCC1-210ENST00000625275 FAM74A1Q5RGS3 127 aa14.75□□□□□ -0.05
R3HCC1-210ENST00000625275 ALKAL2Q6UX46 152 aa14.75□□□□□ -0.05
R3HCC1-210ENST00000625275 FXYD5Q96DB9 178 aa14.75□□□□□ -0.05
R3HCC1-210ENST00000625275 ZNF586Q9NXT0 402 aa14.75□□□□□ -0.05
R3HCC1-210ENST00000625275 RYR2Q92736 4967 aa14.75□□□□□ -0.05
R3HCC1-210ENST00000625275 LOC102724200A0A096LPH7 203 aaPredicted RBP14.74□□□□□ -0.05
R3HCC1-210ENST00000625275 ARL14EPLP0DKL9 152 aa14.74□□□□□ -0.05
R3HCC1-210ENST00000625275 HIST1H1EP10412 219 aaKnown RBP14.74□□□□□ -0.05
R3HCC1-210ENST00000625275 MEOX2P50222 304 aa14.74□□□□□ -0.05
R3HCC1-210ENST00000625275 SULT1A2P50226 295 aa14.74□□□□□ -0.05
R3HCC1-210ENST00000625275 DPPA3Q6W0C5 159 aa14.74□□□□□ -0.05
R3HCC1-210ENST00000625275 PQLC2Q6ZP29 291 aa14.74□□□□□ -0.05
R3HCC1-210ENST00000625275 FAM213BQ8TBF2 198 aa14.74□□□□□ -0.05
R3HCC1-210ENST00000625275 LYSTQ99698 3801 aa14.74□□□□□ -0.05
R3HCC1-210ENST00000625275 SLC17A3O00476 420 aa14.73□□□□□ -0.05
R3HCC1-210ENST00000625275 UBE2L3P68036 154 aaKnown RBP14.73□□□□□ -0.05
R3HCC1-210ENST00000625275 RNF141Q8WVD5 230 aa14.73□□□□□ -0.05
R3HCC1-210ENST00000625275 ZNF688P0C7X2 276 aa14.72□□□□□ -0.05
R3HCC1-210ENST00000625275 RAB5CP51148 216 aa14.72□□□□□ -0.05
R3HCC1-210ENST00000625275 GUK1Q16774 197 aa14.72□□□□□ -0.05
R3HCC1-210ENST00000625275 ODF3L2Q3SX64 289 aa14.72□□□□□ -0.05
R3HCC1-210ENST00000625275 LCN15Q6UWW0 184 aa14.72□□□□□ -0.05
R3HCC1-210ENST00000625275 SAT2Q96F10 170 aaPredicted RBP14.72□□□□□ -0.05
R3HCC1-210ENST00000625275 TRBV19A0A075B6N1 114 aa14.71□□□□□ -0.05
R3HCC1-210ENST00000625275 TRAV8-2A0A0B4J237 113 aa14.71□□□□□ -0.05
R3HCC1-210ENST00000625275 MAP1LC3B2A6NCE7 125 aa14.71□□□□□ -0.05
R3HCC1-210ENST00000625275 ISLRO14498 428 aa14.71□□□□□ -0.05
R3HCC1-210ENST00000625275 CXorf1O96002 111 aa14.71□□□□□ -0.05
R3HCC1-210ENST00000625275 NBEAP1P0C6P0 100 aa14.71□□□□□ -0.05
R3HCC1-210ENST00000625275 PSMB3P49720 205 aa14.71□□□□□ -0.05
R3HCC1-210ENST00000625275 SAMD13Q5VXD3 122 aa14.71□□□□□ -0.05
R3HCC1-210ENST00000625275 BLNKQ8WV28 456 aa14.71□□□□□ -0.05
R3HCC1-210ENST00000625275 C16orf92Q96LL3 132 aa14.71□□□□□ -0.05
R3HCC1-210ENST00000625275 MAP1LC3BQ9GZQ8 125 aa14.71□□□□□ -0.05
R3HCC1-210ENST00000625275 MAP6D1Q9H9H5 199 aa14.71□□□□□ -0.05
R3HCC1-210ENST00000625275 UBQLN2Q9UHD9 624 aa14.71□□□□□ -0.05
R3HCC1-210ENST00000625275 NDUFB4O95168 129 aa14.7□□□□□ -0.06
R3HCC1-210ENST00000625275 FGF8P55075 233 aaPredicted RBP14.7□□□□□ -0.06
R3HCC1-210ENST00000625275 IGFL4Q6B9Z1 124 aa14.7□□□□□ -0.06
R3HCC1-210ENST00000625275 OVOL2Q9BRP0 275 aa14.7□□□□□ -0.06
R3HCC1-210ENST00000625275 ZNF331Q9NQX6 463 aaPredicted RBP14.7□□□□□ -0.06
R3HCC1-210ENST00000625275 GCHFRP30047 84 aa14.69□□□□□ -0.06
R3HCC1-210ENST00000625275 SNRPD3P62318 126 aaKnown RBP14.69□□□□□ -0.06
R3HCC1-210ENST00000625275 PDE6HQ13956 83 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms