RNA–Protein interactions for RNA: ENST00000623253.4_PAR_Y

CD99-211, Transcript of CD99 molecule (Xg blood group), humanhuman

TSL 1 (best)

Gene CD99, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD99-211ENST00000623253_PAR_Y SDHCQ99643 169 aaPredicted RBP11.34□□□□□ -0.59
CD99-211ENST00000623253_PAR_Y SLC25A39Q9BZJ4 359 aaPredicted RBP11.34□□□□□ -0.59
CD99-211ENST00000623253_PAR_Y SCRT2Q9NQ03 307 aa11.34□□□□□ -0.59
CD99-211ENST00000623253_PAR_Y PPP1R14DQ9NXH3 145 aa11.34□□□□□ -0.59
CD99-211ENST00000623253_PAR_Y IL5P05113 134 aa11.33□□□□□ -0.6
CD99-211ENST00000623253_PAR_Y ANXA7P20073 488 aaKnown RBP11.33□□□□□ -0.6
CD99-211ENST00000623253_PAR_Y BTCP35070 178 aa11.33□□□□□ -0.6
CD99-211ENST00000623253_PAR_Y RHOBP62745 196 aa11.33□□□□□ -0.6
CD99-211ENST00000623253_PAR_Y CNPY1Q3B7I2 92 aa11.33□□□□□ -0.6
CD99-211ENST00000623253_PAR_Y CYP2G1PQ6ZSU1 146 aa11.33□□□□□ -0.6
CD99-211ENST00000623253_PAR_Y Q8N1X5 172 aa11.33□□□□□ -0.6
CD99-211ENST00000623253_PAR_Y ZNF738Q8NE65 137 aa11.33□□□□□ -0.6
CD99-211ENST00000623253_PAR_Y TRAV8-2A0A0B4J237 113 aa11.32□□□□□ -0.6
CD99-211ENST00000623253_PAR_Y CBY3A6NI87 242 aa11.32□□□□□ -0.6
CD99-211ENST00000623253_PAR_Y PMS2P5A8MQ11 134 aa11.32□□□□□ -0.6
CD99-211ENST00000623253_PAR_Y TSPOP30536 169 aa11.32□□□□□ -0.6
CD99-211ENST00000623253_PAR_Y SSX7Q7RTT5 188 aa11.32□□□□□ -0.6
CD99-211ENST00000623253_PAR_Y RNF141Q8WVD5 230 aa11.32□□□□□ -0.6
CD99-211ENST00000623253_PAR_Y PLAC8L1A1L4L8 177 aa11.31□□□□□ -0.6
CD99-211ENST00000623253_PAR_Y FNDC10F2Z333 226 aa11.31□□□□□ -0.6
CD99-211ENST00000623253_PAR_Y BOLA2-SMG1P6H3BVE0 249 aa11.31□□□□□ -0.6
CD99-211ENST00000623253_PAR_Y HYPMO75409 117 aa11.31□□□□□ -0.6
CD99-211ENST00000623253_PAR_Y IL7P13232 177 aa11.31□□□□□ -0.6
CD99-211ENST00000623253_PAR_Y RAP2BP61225 183 aa11.31□□□□□ -0.6
CD99-211ENST00000623253_PAR_Y SELENOTP62341 195 aa11.31□□□□□ -0.6
CD99-211ENST00000623253_PAR_Y DLK1P80370 383 aa11.31□□□□□ -0.6
CD99-211ENST00000623253_PAR_Y HIST1H1AQ02539 215 aaPredicted RBP11.31□□□□□ -0.6
CD99-211ENST00000623253_PAR_Y IAH1Q2TAA2 248 aaPredicted RBP11.31□□□□□ -0.6
CD99-211ENST00000623253_PAR_Y TMEM14EPQ6UXP3 125 aa11.31□□□□□ -0.6
CD99-211ENST00000623253_PAR_Y Q9H8V8 135 aa11.31□□□□□ -0.6
CD99-211ENST00000623253_PAR_Y HIGD1AQ9Y241 93 aa11.31□□□□□ -0.6
CD99-211ENST00000623253_PAR_Y LRP1BQ9NZR2 4599 aa11.31□□□□□ -0.6
CD99-211ENST00000623253_PAR_Y H3BRN7 92 aa11.3□□□□□ -0.6
CD99-211ENST00000623253_PAR_Y TSC22D2O75157 780 aa11.3□□□□□ -0.6
CD99-211ENST00000623253_PAR_Y SCGB1D2O95969 90 aa11.3□□□□□ -0.6
CD99-211ENST00000623253_PAR_Y METTL15P1P0C7V9 234 aa11.3□□□□□ -0.6
CD99-211ENST00000623253_PAR_Y PRB4P10163 310 aaPredicted RBP11.3□□□□□ -0.6
CD99-211ENST00000623253_PAR_Y RPL7P18124 248 aaKnown RBP11.3□□□□□ -0.6
CD99-211ENST00000623253_PAR_Y PLP1P60201 277 aa11.3□□□□□ -0.6
CD99-211ENST00000623253_PAR_Y RRAS2P62070 204 aaPredicted RBP11.3□□□□□ -0.6
CD99-211ENST00000623253_PAR_Y OR5I1Q13606 314 aa11.3□□□□□ -0.6
CD99-211ENST00000623253_PAR_Y S100A7AQ86SG5 101 aa11.3□□□□□ -0.6
CD99-211ENST00000623253_PAR_Y ZBTB8BQ8NAP8 495 aaPredicted RBP11.3□□□□□ -0.6
CD99-211ENST00000623253_PAR_Y MITD1Q8WV92 249 aa11.3□□□□□ -0.6
CD99-211ENST00000623253_PAR_Y UHRF2Q96PU4 802 aa11.3□□□□□ -0.6
CD99-211ENST00000623253_PAR_Y SHANK2-AS3Q9BTD1 123 aa11.3□□□□□ -0.6
CD99-211ENST00000623253_PAR_Y LINC00869P0C866 280 aa11.29□□□□□ -0.6
CD99-211ENST00000623253_PAR_Y TAS2R30P59541 319 aa11.29□□□□□ -0.6
CD99-211ENST00000623253_PAR_Y TAS2R60P59551 318 aa11.29□□□□□ -0.6
CD99-211ENST00000623253_PAR_Y OR10P1Q8NGE3 313 aa11.29□□□□□ -0.6
CD99-211ENST00000623253_PAR_Y LRRC20Q8TCA0 184 aa11.29□□□□□ -0.6
CD99-211ENST00000623253_PAR_Y C16orf74Q96GX8 76 aa11.29□□□□□ -0.6
CD99-211ENST00000623253_PAR_Y NPVFQ9HCQ7 196 aa11.29□□□□□ -0.6
CD99-211ENST00000623253_PAR_Y NOP10Q9NPE3 64 aaKnown RBP11.29□□□□□ -0.6
CD99-211ENST00000623253_PAR_Y GSKIPQ9P0R6 139 aa11.29□□□□□ -0.6
CD99-211ENST00000623253_PAR_Y MGAT4CQ9UBM8 478 aa11.29□□□□□ -0.6
CD99-211ENST00000623253_PAR_Y TIMM8BQ9Y5J9 83 aaPredicted RBP11.29□□□□□ -0.6
CD99-211ENST00000623253_PAR_Y CCNKO75909 580 aa11.28□□□□□ -0.6
CD99-211ENST00000623253_PAR_Y OR5G3P0C626 314 aa11.28□□□□□ -0.6
CD99-211ENST00000623253_PAR_Y TEPPQ6URK8 271 aa11.28□□□□□ -0.6
CD99-211ENST00000623253_PAR_Y TMEM256Q8N2U0 113 aa11.28□□□□□ -0.6
CD99-211ENST00000623253_PAR_Y OR8A1Q8NGG7 326 aa11.28□□□□□ -0.6
CD99-211ENST00000623253_PAR_Y C20orf85Q9H1P6 137 aa11.28□□□□□ -0.6
CD99-211ENST00000623253_PAR_Y RNF24Q9Y225 148 aa11.28□□□□□ -0.6
CD99-211ENST00000623253_PAR_Y RCL1Q9Y2P8 373 aaKnown RBP11.28□□□□□ -0.6
CD99-211ENST00000623253_PAR_Y TRAV26-1A0A087WT03 109 aa11.27□□□□□ -0.61
CD99-211ENST00000623253_PAR_Y A6NJY4 79 aa11.27□□□□□ -0.61
CD99-211ENST00000623253_PAR_Y K7EPK0 472 aa11.27□□□□□ -0.61
CD99-211ENST00000623253_PAR_Y LYRM1O43325 122 aa11.27□□□□□ -0.61
CD99-211ENST00000623253_PAR_Y TTC32Q5I0X7 151 aa11.27□□□□□ -0.61
CD99-211ENST00000623253_PAR_Y GNPNAT1Q96EK6 184 aaPredicted RBP11.27□□□□□ -0.61
CD99-211ENST00000623253_PAR_Y GGACTQ9BVM4 153 aa11.27□□□□□ -0.61
CD99-211ENST00000623253_PAR_Y NDUFA13Q9P0J0 144 aa11.27□□□□□ -0.61
CD99-211ENST00000623253_PAR_Y A0A0J9YY99 117 aa11.26□□□□□ -0.61
CD99-211ENST00000623253_PAR_Y PLA2G10O15496 165 aa11.26□□□□□ -0.61
CD99-211ENST00000623253_PAR_Y CXCL3P19876 107 aa11.26□□□□□ -0.61
CD99-211ENST00000623253_PAR_Y SLC38A11Q08AI6 406 aa11.26□□□□□ -0.61
CD99-211ENST00000623253_PAR_Y PXDC1Q5TGL8 231 aa11.26□□□□□ -0.61
CD99-211ENST00000623253_PAR_Y KRTAP1-5Q9BYS1 174 aa11.26□□□□□ -0.61
CD99-211ENST00000623253_PAR_Y ARL6Q9H0F7 186 aa11.26□□□□□ -0.61
CD99-211ENST00000623253_PAR_Y A0A087X0K7 114 aa11.25□□□□□ -0.61
CD99-211ENST00000623253_PAR_Y MBPP02686 304 aaPredicted RBP11.25□□□□□ -0.61
CD99-211ENST00000623253_PAR_Y KRTAP10-2P60368 255 aa11.25□□□□□ -0.61
CD99-211ENST00000623253_PAR_Y ZNF846Q147U1 533 aa11.25□□□□□ -0.61
CD99-211ENST00000623253_PAR_Y PSG3Q16557 428 aa11.25□□□□□ -0.61
CD99-211ENST00000623253_PAR_Y ZNF493Q6ZR52 646 aa11.25□□□□□ -0.61
CD99-211ENST00000623253_PAR_Y ZNF546Q86UE3 836 aa11.25□□□□□ -0.61
CD99-211ENST00000623253_PAR_Y OR10J6PQ8NGY7 276 aa11.25□□□□□ -0.61
CD99-211ENST00000623253_PAR_Y ARV1Q9H2C2 271 aa11.25□□□□□ -0.61
CD99-211ENST00000623253_PAR_Y PGPEP1Q9NXJ5 209 aa11.25□□□□□ -0.61
CD99-211ENST00000623253_PAR_Y C7orf66A4D0T2 115 aa11.24□□□□□ -0.61
CD99-211ENST00000623253_PAR_Y L7N2F9 121 aa11.24□□□□□ -0.61
CD99-211ENST00000623253_PAR_Y GOSR2O14653 212 aa11.24□□□□□ -0.61
CD99-211ENST00000623253_PAR_Y TCRBP04435 133 aa11.24□□□□□ -0.61
CD99-211ENST00000623253_PAR_Y M6PRP20645 277 aa11.24□□□□□ -0.61
CD99-211ENST00000623253_PAR_Y CDKN1BP46527 198 aa11.24□□□□□ -0.61
CD99-211ENST00000623253_PAR_Y VAMP2P63027 116 aa11.24□□□□□ -0.61
CD99-211ENST00000623253_PAR_Y ARL16Q0P5N6 197 aa11.24□□□□□ -0.61
CD99-211ENST00000623253_PAR_Y PATE2Q6UY27 113 aa11.24□□□□□ -0.61
CD99-211ENST00000623253_PAR_Y TMEM263Q8WUH6 116 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms