RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 PRR20BP86481 221 aa13.09□□□□□ -0.31
SCAMP4-213ENST00000621748 PRR20AP86496 221 aa13.09□□□□□ -0.31
SCAMP4-213ENST00000621748 CD300CQ08708 224 aa13.09□□□□□ -0.31
SCAMP4-213ENST00000621748 RSG1Q9BU20 258 aa13.09□□□□□ -0.31
SCAMP4-213ENST00000621748 ARV1Q9H2C2 271 aa13.09□□□□□ -0.31
SCAMP4-213ENST00000621748 A0A1W2PPV4 95 aa13.08□□□□□ -0.32
SCAMP4-213ENST00000621748 PLP1P60201 277 aa13.08□□□□□ -0.32
SCAMP4-213ENST00000621748 SERF2P84101 59 aa13.08□□□□□ -0.32
SCAMP4-213ENST00000621748 LGALSLQ3ZCW2 172 aaPredicted RBP13.08□□□□□ -0.32
SCAMP4-213ENST00000621748 CEMP1Q6PRD7 247 aaPredicted RBP13.08□□□□□ -0.32
SCAMP4-213ENST00000621748 TMEM182Q6ZP80 229 aaPredicted RBP13.08□□□□□ -0.32
SCAMP4-213ENST00000621748 OR8I2Q8N0Y5 310 aa13.08□□□□□ -0.32
SCAMP4-213ENST00000621748 PSMG3Q9BT73 122 aaPredicted RBP13.08□□□□□ -0.32
SCAMP4-213ENST00000621748 SLC25A22Q9H936 323 aa13.08□□□□□ -0.32
SCAMP4-213ENST00000621748 SEPSECSQ9HD40 501 aaKnown RBP13.08□□□□□ -0.32
SCAMP4-213ENST00000621748 NUPR2A6NF83 97 aa13.07□□□□□ -0.32
SCAMP4-213ENST00000621748 DEFB4AO15263 64 aa13.07□□□□□ -0.32
SCAMP4-213ENST00000621748 SPP1P10451 314 aa13.07□□□□□ -0.32
SCAMP4-213ENST00000621748 ATP6V0CP27449 155 aa13.07□□□□□ -0.32
SCAMP4-213ENST00000621748 SNRPD3P62318 126 aaKnown RBP13.07□□□□□ -0.32
SCAMP4-213ENST00000621748 C1orf194Q5T5A4 169 aa13.07□□□□□ -0.32
SCAMP4-213ENST00000621748 MORN3Q6PF18 240 aaPredicted RBP13.07□□□□□ -0.32
SCAMP4-213ENST00000621748 LINC00305Q7Z4B0 112 aa13.07□□□□□ -0.32
SCAMP4-213ENST00000621748 OR2G3Q8NGZ4 309 aa13.07□□□□□ -0.32
SCAMP4-213ENST00000621748 GPR82Q96P67 336 aa13.07□□□□□ -0.32
SCAMP4-213ENST00000621748 EPPK1P58107 5090 aaKnown RBP13.07□□□□□ -0.32
SCAMP4-213ENST00000621748 GALR1P47211 349 aa13.06□□□□□ -0.32
SCAMP4-213ENST00000621748 RHOBP62745 196 aa13.06□□□□□ -0.32
SCAMP4-213ENST00000621748 AKR1C8PQ5T2L2 129 aa13.06□□□□□ -0.32
SCAMP4-213ENST00000621748 SLC51BQ86UW2 128 aa13.06□□□□□ -0.32
SCAMP4-213ENST00000621748 SLC25A39Q9BZJ4 359 aaPredicted RBP13.06□□□□□ -0.32
SCAMP4-213ENST00000621748 SLC25A32Q9H2D1 315 aa13.06□□□□□ -0.32
SCAMP4-213ENST00000621748 C11orf68Q9H3H3 251 aaKnown RBP13.06□□□□□ -0.32
SCAMP4-213ENST00000621748 ZNF98A6NK75 572 aa13.05□□□□□ -0.32
SCAMP4-213ENST00000621748 TMEM41BQ5BJD5 291 aa13.05□□□□□ -0.32
SCAMP4-213ENST00000621748 FAM78BQ5VT40 261 aa13.05□□□□□ -0.32
SCAMP4-213ENST00000621748 BAP18Q8IXM2 172 aa13.05□□□□□ -0.32
SCAMP4-213ENST00000621748 C9orf62Q8N4C0 152 aa13.05□□□□□ -0.32
SCAMP4-213ENST00000621748 CYTL1Q9NRR1 136 aa13.05□□□□□ -0.32
SCAMP4-213ENST00000621748 CLEC5AQ9NY25 188 aa13.05□□□□□ -0.32
SCAMP4-213ENST00000621748 H3BMM0 161 aa13.04□□□□□ -0.32
SCAMP4-213ENST00000621748 RPL7P18124 248 aaKnown RBP13.04□□□□□ -0.32
SCAMP4-213ENST00000621748 M6PRP20645 277 aa13.04□□□□□ -0.32
SCAMP4-213ENST00000621748 TAS2R45P59539 299 aa13.04□□□□□ -0.32
SCAMP4-213ENST00000621748 DEFB1P60022 68 aa13.04□□□□□ -0.32
SCAMP4-213ENST00000621748 NANOS2P60321 138 aaKnown RBP13.04□□□□□ -0.32
SCAMP4-213ENST00000621748 Q8NAQ8 132 aa13.04□□□□□ -0.32
SCAMP4-213ENST00000621748 CSNK1G2-AS1Q8NCQ2 148 aa13.04□□□□□ -0.32
SCAMP4-213ENST00000621748 OR10G4Q8NGN3 311 aa13.04□□□□□ -0.32
SCAMP4-213ENST00000621748 OR10G9Q8NGN4 311 aa13.04□□□□□ -0.32
SCAMP4-213ENST00000621748 OR10G7Q8NGN6 311 aa13.04□□□□□ -0.32
SCAMP4-213ENST00000621748 C11orf45Q8TAV5 145 aa13.04□□□□□ -0.32
SCAMP4-213ENST00000621748 PHLDA1Q8WV24 401 aaPredicted RBP13.04□□□□□ -0.32
SCAMP4-213ENST00000621748 UHRF2Q96PU4 802 aa13.04□□□□□ -0.32
SCAMP4-213ENST00000621748 SHANK2-AS3Q9BTD1 123 aa13.04□□□□□ -0.32
SCAMP4-213ENST00000621748 MRPL32Q9BYC8 188 aaKnown RBP13.04□□□□□ -0.32
SCAMP4-213ENST00000621748 SOCS3O14543 225 aa13.03□□□□□ -0.32
SCAMP4-213ENST00000621748 NKX2-5P52952 324 aaPredicted RBP13.03□□□□□ -0.32
SCAMP4-213ENST00000621748 GDF5OSQ5U4N7 250 aa13.03□□□□□ -0.32
SCAMP4-213ENST00000621748 BPIFA4PQ86YQ2 179 aa13.03□□□□□ -0.32
SCAMP4-213ENST00000621748 LRRC20Q8TCA0 184 aa13.03□□□□□ -0.32
SCAMP4-213ENST00000621748 SCRT1Q9BWW7 348 aa13.03□□□□□ -0.32
SCAMP4-213ENST00000621748 ACTR3CQ9C0K3 210 aaPredicted RBP13.03□□□□□ -0.32
SCAMP4-213ENST00000621748 SH3BGRL3Q9H299 93 aa13.03□□□□□ -0.32
SCAMP4-213ENST00000621748 ZNF705EA8MWA4 302 aaPredicted RBP13.02□□□□□ -0.33
SCAMP4-213ENST00000621748 H3BRN7 92 aa13.02□□□□□ -0.33
SCAMP4-213ENST00000621748 SEC11BP0C7V7 166 aa13.02□□□□□ -0.33
SCAMP4-213ENST00000621748 RBMY1A1P0DJD3 496 aaKnown RBP13.02□□□□□ -0.33
SCAMP4-213ENST00000621748 RBMY1CP0DJD4 496 aa13.02□□□□□ -0.33
SCAMP4-213ENST00000621748 RBMY1FQ15415 496 aaKnown RBP13.02□□□□□ -0.33
SCAMP4-213ENST00000621748 SAMD13Q5VXD3 122 aa13.02□□□□□ -0.33
SCAMP4-213ENST00000621748 FAM122CQ6P4D5 195 aa13.02□□□□□ -0.33
SCAMP4-213ENST00000621748 PATE2Q6UY27 113 aa13.02□□□□□ -0.33
SCAMP4-213ENST00000621748 TMEM37Q8WXS4 190 aa13.02□□□□□ -0.33
SCAMP4-213ENST00000621748 LINC00476Q8WZB0 136 aa13.02□□□□□ -0.33
SCAMP4-213ENST00000621748 LINC00052Q96N35 136 aa13.02□□□□□ -0.33
SCAMP4-213ENST00000621748 FUT9Q9Y231 359 aa13.02□□□□□ -0.33
SCAMP4-213ENST00000621748 KLK5Q9Y337 293 aaPredicted RBP13.02□□□□□ -0.33
SCAMP4-213ENST00000621748 X6R8D5 127 aa13.02□□□□□ -0.33
SCAMP4-213ENST00000621748 KMT2AQ03164 3969 aa13.02□□□□□ -0.33
SCAMP4-213ENST00000621748 IGHV4-28A0A0C4DH34 117 aa13.01□□□□□ -0.33
SCAMP4-213ENST00000621748 UMAD1C9J7I0 102 aa13.01□□□□□ -0.33
SCAMP4-213ENST00000621748 HLA-DRB4P13762 266 aa13.01□□□□□ -0.33
SCAMP4-213ENST00000621748 STOML3Q8TAV4 291 aa13.01□□□□□ -0.33
SCAMP4-213ENST00000621748 C17orf77Q96MU5 243 aa13.01□□□□□ -0.33
SCAMP4-213ENST00000621748 HLA-DRB4X5D2U9 266 aa13.01□□□□□ -0.33
SCAMP4-213ENST00000621748 ID1P41134 155 aa13□□□□□ -0.33
SCAMP4-213ENST00000621748 PSMB3P49720 205 aa13□□□□□ -0.33
SCAMP4-213ENST00000621748 MEOX2P50222 304 aa13□□□□□ -0.33
SCAMP4-213ENST00000621748 KHDC3LQ587J8 217 aa13□□□□□ -0.33
SCAMP4-213ENST00000621748 XCL2Q9UBD3 114 aa13□□□□□ -0.33
SCAMP4-213ENST00000621748 VPS13DQ5THJ4 4388 aa13□□□□□ -0.33
SCAMP4-213ENST00000621748 OR7C2O60412 319 aa12.99□□□□□ -0.33
SCAMP4-213ENST00000621748 LY6G6CO95867 125 aa12.99□□□□□ -0.33
SCAMP4-213ENST00000621748 IGKV3-20P01619 116 aa12.99□□□□□ -0.33
SCAMP4-213ENST00000621748 MIFP14174 115 aa12.99□□□□□ -0.33
SCAMP4-213ENST00000621748 CDC34P49427 236 aaPredicted RBP12.99□□□□□ -0.33
SCAMP4-213ENST00000621748 RAB2AP61019 212 aa12.99□□□□□ -0.33
SCAMP4-213ENST00000621748 NUTF2P61970 127 aaKnown RBP12.99□□□□□ -0.33
SCAMP4-213ENST00000621748 GCSAMLQ5JQS6 135 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms