RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 SPACA3Q8IXA5 215 aa8.62□□□□□ -1.03
CDH1-214ENST00000621016 RBMXL3Q8N7X1 1067 aaKnown RBP8.62□□□□□ -1.03
CDH1-214ENST00000621016 C8orf46Q8TAG6 207 aa8.62□□□□□ -1.03
CDH1-214ENST00000621016 FAM168AQ92567 244 aa8.62□□□□□ -1.03
CDH1-214ENST00000621016 COL27A1Q8IZC6 1860 aaPredicted RBP8.61□□□□□ -1.03
CDH1-214ENST00000621016 hADV38S2A0JD32 116 aa8.61□□□□□ -1.03
CDH1-214ENST00000621016 FLYWCH2Q96CP2 140 aaKnown RBP8.61□□□□□ -1.03
CDH1-214ENST00000621016 DYNLRB1Q9NP97 96 aa8.61□□□□□ -1.03
CDH1-214ENST00000621016 COX7A2P2O60397 106 aa8.61□□□□□ -1.03
CDH1-214ENST00000621016 SEC11AP67812 179 aa8.61□□□□□ -1.03
CDH1-214ENST00000621016 SPATA25Q9BR10 227 aa8.61□□□□□ -1.03
CDH1-214ENST00000621016 GNB1LQ9BYB4 327 aa8.61□□□□□ -1.03
CDH1-214ENST00000621016 C1RLQ9NZP8 487 aa8.61□□□□□ -1.03
CDH1-214ENST00000621016 PRNDQ9UKY0 176 aa8.61□□□□□ -1.03
CDH1-214ENST00000621016 S4R3C0 116 aa8.61□□□□□ -1.03
CDH1-214ENST00000621016 UPK2O00526 184 aa8.6□□□□□ -1.03
CDH1-214ENST00000621016 TM4SF5O14894 197 aa8.6□□□□□ -1.03
CDH1-214ENST00000621016 NHP2Q9NX24 153 aaKnown RBP8.6□□□□□ -1.03
CDH1-214ENST00000621016 MBD3L4A6NDZ8 208 aaPredicted RBP8.6□□□□□ -1.03
CDH1-214ENST00000621016 MBD3L3A6NE82 208 aaPredicted RBP8.6□□□□□ -1.03
CDH1-214ENST00000621016 MBD3L5A6NJ08 208 aaPredicted RBP8.6□□□□□ -1.03
CDH1-214ENST00000621016 LHBP01229 141 aa8.6□□□□□ -1.03
CDH1-214ENST00000621016 COX7A1P24310 79 aa8.6□□□□□ -1.03
CDH1-214ENST00000621016 ERHP84090 104 aaKnown RBP8.6□□□□□ -1.03
CDH1-214ENST00000621016 PRR30Q53SZ7 412 aaPredicted RBP8.6□□□□□ -1.03
CDH1-214ENST00000621016 ZNF562Q6V9R5 426 aa8.6□□□□□ -1.03
CDH1-214ENST00000621016 MBD3L2Q8NHZ7 208 aaPredicted RBP8.6□□□□□ -1.03
CDH1-214ENST00000621016 PTH2Q96A98 100 aa8.6□□□□□ -1.03
CDH1-214ENST00000621016 RPUSD1Q9UJJ7 312 aaKnown RBP8.6□□□□□ -1.03
CDH1-214ENST00000621016 CSN1S1P47710 185 aa8.6□□□□□ -1.03
CDH1-214ENST00000621016 IBA57Q5T440 356 aaKnown RBP8.6□□□□□ -1.03
CDH1-214ENST00000621016 TMEM200BQ69YZ2 307 aa8.6□□□□□ -1.03
CDH1-214ENST00000621016 RAB1CQ92928 201 aa8.6□□□□□ -1.03
CDH1-214ENST00000621016 VGLL1Q99990 258 aa8.6□□□□□ -1.03
CDH1-214ENST00000621016 RAB1BQ9H0U4 201 aa8.6□□□□□ -1.03
CDH1-214ENST00000621016 UBTD1Q9HAC8 227 aa8.6□□□□□ -1.03
CDH1-214ENST00000621016 MRPL36Q9P0J6 103 aaKnown RBP8.6□□□□□ -1.03
CDH1-214ENST00000621016 FOXA2Q9Y261 457 aaPredicted RBP8.6□□□□□ -1.03
CDH1-214ENST00000621016 CYSLTR1Q9Y271 337 aa8.6□□□□□ -1.03
CDH1-214ENST00000621016 LY6HO94772 140 aa8.59□□□□□ -1.03
CDH1-214ENST00000621016 FCER1GP30273 86 aa8.59□□□□□ -1.03
CDH1-214ENST00000621016 KIR2DS2P43631 304 aa8.59□□□□□ -1.03
CDH1-214ENST00000621016 ZNF503Q96F45 646 aa8.59□□□□□ -1.03
CDH1-214ENST00000621016 ZNF714Q96N38 554 aa8.59□□□□□ -1.03
CDH1-214ENST00000621016 VPREB3Q9UKI3 123 aa8.59□□□□□ -1.03
CDH1-214ENST00000621016 TGFAP01135 160 aa8.59□□□□□ -1.03
CDH1-214ENST00000621016 RUSC1-AS1Q66K80 236 aa8.59□□□□□ -1.03
CDH1-214ENST00000621016 OR5AN1Q8NGI8 311 aa8.59□□□□□ -1.03
CDH1-214ENST00000621016 AGRNO00468 2067 aa8.59□□□□□ -1.03
CDH1-214ENST00000621016 A0A1W2PRE2 83 aa8.59□□□□□ -1.04
CDH1-214ENST00000621016 C16orf97H3BN30 126 aa8.59□□□□□ -1.04
CDH1-214ENST00000621016 APOMO95445 188 aa8.59□□□□□ -1.04
CDH1-214ENST00000621016 CGB3P0DN86 165 aa8.59□□□□□ -1.04
CDH1-214ENST00000621016 CGB7P0DN87 165 aa8.59□□□□□ -1.04
CDH1-214ENST00000621016 CNTFRP26992 372 aa8.59□□□□□ -1.04
CDH1-214ENST00000621016 PRR20EP86478 221 aa8.59□□□□□ -1.04
CDH1-214ENST00000621016 PRR20CP86479 221 aa8.59□□□□□ -1.04
CDH1-214ENST00000621016 PRR20DP86480 221 aa8.59□□□□□ -1.04
CDH1-214ENST00000621016 PRR20BP86481 221 aa8.59□□□□□ -1.04
CDH1-214ENST00000621016 PRR20AP86496 221 aa8.59□□□□□ -1.04
CDH1-214ENST00000621016 PRCDQ00LT1 54 aa8.59□□□□□ -1.04
CDH1-214ENST00000621016 WT1-ASQ06250 92 aa8.59□□□□□ -1.04
CDH1-214ENST00000621016 SRSF9Q13242 221 aaKnown RBP eCLIP8.59□□□□□ -1.04
CDH1-214ENST00000621016 WFDC3Q8IUB2 231 aa8.59□□□□□ -1.04
CDH1-214ENST00000621016 OR8A1Q8NGG7 326 aa8.59□□□□□ -1.04
CDH1-214ENST00000621016 PCP2Q8IVA1 136 aa8.58□□□□□ -1.04
CDH1-214ENST00000621016 GPR82Q96P67 336 aa8.58□□□□□ -1.04
CDH1-214ENST00000621016 NGBQ9NPG2 151 aa8.58□□□□□ -1.04
CDH1-214ENST00000621016 V9GYV3 84 aa8.58□□□□□ -1.04
CDH1-214ENST00000621016 A0A0G2JNJ9 132 aa8.58□□□□□ -1.04
CDH1-214ENST00000621016 PRRG2O14669 202 aa8.58□□□□□ -1.04
CDH1-214ENST00000621016 NDUFB3O43676 98 aa8.58□□□□□ -1.04
CDH1-214ENST00000621016 RNASE2P10153 161 aaKnown RBP8.58□□□□□ -1.04
CDH1-214ENST00000621016 TNFRSF1AP19438 455 aa8.58□□□□□ -1.04
CDH1-214ENST00000621016 ADIPOQQ15848 244 aa8.58□□□□□ -1.04
CDH1-214ENST00000621016 GFRALQ6UXV0 394 aa8.58□□□□□ -1.04
CDH1-214ENST00000621016 DAZAP1Q96EP5 407 aaKnown RBP8.58□□□□□ -1.04
CDH1-214ENST00000621016 Q9UFV3 132 aa8.58□□□□□ -1.04
CDH1-214ENST00000621016 AMMECR1Q9Y4X0 333 aaPredicted RBP8.58□□□□□ -1.04
CDH1-214ENST00000621016 LOC107984640A0A0U1RRK4 108 aa8.57□□□□□ -1.04
CDH1-214ENST00000621016 AMY1AP04745 511 aa8.57□□□□□ -1.04
CDH1-214ENST00000621016 C8orf88P0DMB2 117 aa8.57□□□□□ -1.04
CDH1-214ENST00000621016 FXYD2P54710 66 aa8.57□□□□□ -1.04
CDH1-214ENST00000621016 TAS2R45P59539 299 aa8.57□□□□□ -1.04
CDH1-214ENST00000621016 PLGLAQ15195 96 aa8.57□□□□□ -1.04
CDH1-214ENST00000621016 SLC25A48Q6ZT89 311 aaKnown RBP8.57□□□□□ -1.04
CDH1-214ENST00000621016 OR1L8Q8NGR8 309 aa8.57□□□□□ -1.04
CDH1-214ENST00000621016 TRGV8A0A0C4DH27 118 aa8.57□□□□□ -1.04
CDH1-214ENST00000621016 NCR2O95944 276 aa8.57□□□□□ -1.04
CDH1-214ENST00000621016 SMIM13P0DJ93 91 aa8.57□□□□□ -1.04
CDH1-214ENST00000621016 CX3CL1P78423 397 aa8.57□□□□□ -1.04
CDH1-214ENST00000621016 C10orf113Q5VZT2 155 aa8.57□□□□□ -1.04
CDH1-214ENST00000621016 IGFL2Q6UWQ7 119 aa8.57□□□□□ -1.04
CDH1-214ENST00000621016 Q6ZUT4 128 aa8.57□□□□□ -1.04
CDH1-214ENST00000621016 PIP4P1Q86T03 277 aa8.57□□□□□ -1.04
CDH1-214ENST00000621016 ADTRPQ96IZ2 230 aa8.57□□□□□ -1.04
CDH1-214ENST00000621016 SLC25A33Q9BSK2 321 aa8.57□□□□□ -1.04
CDH1-214ENST00000621016 TMEM167BQ9NRX6 74 aa8.57□□□□□ -1.04
CDH1-214ENST00000621016 SSUH2Q9Y2M2 353 aa8.57□□□□□ -1.04
CDH1-214ENST00000621016 IGLV3-9A0A075B6K5 115 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms