RNA–Protein interactions for RNA: ENST00000620859.4

LINC01515-217, Transcript of long intergenic non-protein coding RNA 1515, human

TSL 5 BASIC

Gene LINC01515, Length 694 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01515-217	ENST00000620859	VCAN	P13611	3396 aa		0.26	□□□□□ -2.37
LINC01515-217	ENST00000620859	TET1	Q8NFU7	2136 aa		0.26	□□□□□ -2.37
LINC01515-217	ENST00000620859	TRAV4	A0A0B4J268	109 aa		0.26	□□□□□ -2.37
LINC01515-217	ENST00000620859	OR2T8	A6NH00	312 aa		0.26	□□□□□ -2.37
LINC01515-217	ENST00000620859		E7EUB6	86 aa		0.26	□□□□□ -2.37
LINC01515-217	ENST00000620859	GGCT	O75223	188 aa	Known RBP	0.26	□□□□□ -2.37
LINC01515-217	ENST00000620859	IGLV3-1	P01715	115 aa		0.26	□□□□□ -2.37
LINC01515-217	ENST00000620859	SRI	P30626	198 aa		0.26	□□□□□ -2.37
LINC01515-217	ENST00000620859	CDKN2C	P42773	168 aa		0.26	□□□□□ -2.37
LINC01515-217	ENST00000620859	DSCR4	P56555	118 aa	Predicted RBP	0.26	□□□□□ -2.37
LINC01515-217	ENST00000620859	LIN52	Q52LA3	116 aa		0.26	□□□□□ -2.37
LINC01515-217	ENST00000620859	SPRN	Q5BIV9	151 aa		0.26	□□□□□ -2.37
LINC01515-217	ENST00000620859	ZNF833P	Q6ZTB9	187 aa		0.26	□□□□□ -2.37
LINC01515-217	ENST00000620859	TEN1	Q86WV5	123 aa		0.26	□□□□□ -2.37
LINC01515-217	ENST00000620859	OR11H6	Q8NGC7	330 aa		0.26	□□□□□ -2.37
LINC01515-217	ENST00000620859	OR5D14	Q8NGL3	314 aa		0.26	□□□□□ -2.37
LINC01515-217	ENST00000620859	OR10K1	Q8NGX5	313 aa		0.26	□□□□□ -2.37
LINC01515-217	ENST00000620859	LYSMD1	Q96S90	227 aa		0.26	□□□□□ -2.37
LINC01515-217	ENST00000620859	SLC25A21	Q9BQT8	299 aa	Predicted RBP	0.26	□□□□□ -2.37
LINC01515-217	ENST00000620859	IMUP	Q9GZP8	106 aa		0.26	□□□□□ -2.37
LINC01515-217	ENST00000620859	TMEM126A	Q9H061	195 aa		0.26	□□□□□ -2.37
LINC01515-217	ENST00000620859	TLNRD1	Q9H1K6	362 aa		0.26	□□□□□ -2.37
LINC01515-217	ENST00000620859	TAS2R7	Q9NYW3	318 aa		0.26	□□□□□ -2.37
LINC01515-217	ENST00000620859	PTPRF	P10586	1907 aa		0.26	□□□□□ -2.37
LINC01515-217	ENST00000620859	CIT	O14578	2027 aa		0.26	□□□□□ -2.37
LINC01515-217	ENST00000620859	ZGRF1	Q86YA3	2104 aa		0.26	□□□□□ -2.37
LINC01515-217	ENST00000620859	SZT2	Q5T011	3432 aa		0.25	□□□□□ -2.37
LINC01515-217	ENST00000620859	DCHS1	Q96JQ0	3298 aa		0.25	□□□□□ -2.37
LINC01515-217	ENST00000620859	CNOT1	A5YKK6	2376 aa	Known RBP	0.25	□□□□□ -2.37
LINC01515-217	ENST00000620859	MUC4	Q99102	2169 aa		0.25	□□□□□ -2.37
LINC01515-217	ENST00000620859	ARHGEF11	O15085	1522 aa		0.25	□□□□□ -2.37
LINC01515-217	ENST00000620859	CCDC144A	A2RUR9	1427 aa		0.25	□□□□□ -2.37
LINC01515-217	ENST00000620859	TRAV10	A0A0B4J240	114 aa		0.25	□□□□□ -2.37
LINC01515-217	ENST00000620859	TMEM114	B3SHH9	223 aa		0.25	□□□□□ -2.37
LINC01515-217	ENST00000620859	C17orf112	F2Z3M2	114 aa		0.25	□□□□□ -2.37
LINC01515-217	ENST00000620859		F8W1H4	67 aa		0.25	□□□□□ -2.37
LINC01515-217	ENST00000620859		H3BRM9	83 aa		0.25	□□□□□ -2.37
LINC01515-217	ENST00000620859	IFNA7	P01567	189 aa		0.25	□□□□□ -2.37
LINC01515-217	ENST00000620859	ROMO1	P60602	79 aa		0.25	□□□□□ -2.37
LINC01515-217	ENST00000620859	UBE2B	P63146	152 aa		0.25	□□□□□ -2.37
LINC01515-217	ENST00000620859	KRTAP21-1	Q3LI58	79 aa		0.25	□□□□□ -2.37
LINC01515-217	ENST00000620859	GRINA	Q7Z429	371 aa		0.25	□□□□□ -2.37
LINC01515-217	ENST00000620859	PDZD9	Q8IXQ8	264 aa		0.25	□□□□□ -2.37
LINC01515-217	ENST00000620859	OR10AC1	Q8NH08	325 aa		0.25	□□□□□ -2.37
LINC01515-217	ENST00000620859	PSMF1	Q92530	271 aa		0.25	□□□□□ -2.37
LINC01515-217	ENST00000620859	TEX37	Q96LM6	180 aa		0.25	□□□□□ -2.37
LINC01515-217	ENST00000620859	SIGMAR1	Q99720	223 aa		0.25	□□□□□ -2.37
LINC01515-217	ENST00000620859	PCTP	Q9UKL6	214 aa		0.25	□□□□□ -2.37
LINC01515-217	ENST00000620859	CFAP47	Q6ZTR5	3102 aa		0.25	□□□□□ -2.37
LINC01515-217	ENST00000620859	LAMA1	P25391	3075 aa		0.25	□□□□□ -2.37
LINC01515-217	ENST00000620859	PCNX1	Q96RV3	2341 aa		0.25	□□□□□ -2.37
LINC01515-217	ENST00000620859	KNTC1	P50748	2209 aa		0.25	□□□□□ -2.37
LINC01515-217	ENST00000620859	SPTB	P11277	2137 aa		0.25	□□□□□ -2.37
LINC01515-217	ENST00000620859	LAMA3	Q16787	3333 aa		0.25	□□□□□ -2.37
LINC01515-217	ENST00000620859	NUP98	P52948	1817 aa		0.24	□□□□□ -2.37
LINC01515-217	ENST00000620859	KCP	Q6ZWJ8	1503 aa		0.24	□□□□□ -2.37
LINC01515-217	ENST00000620859	CECR2	Q9BXF3	1484 aa		0.24	□□□□□ -2.37
LINC01515-217	ENST00000620859	EP400	Q96L91	3159 aa		0.24	□□□□□ -2.37
LINC01515-217	ENST00000620859	ERC2-IT1	O76042	136 aa		0.24	□□□□□ -2.37
LINC01515-217	ENST00000620859	OR10J4	P0C629	311 aa		0.24	□□□□□ -2.37
LINC01515-217	ENST00000620859	CXCL8	P10145	99 aa		0.24	□□□□□ -2.37
LINC01515-217	ENST00000620859	COX7C	P15954	63 aa		0.24	□□□□□ -2.37
LINC01515-217	ENST00000620859	SPINK9	Q5DT21	86 aa		0.24	□□□□□ -2.37
LINC01515-217	ENST00000620859	EIF5AL1	Q6IS14	154 aa	Known RBP	0.24	□□□□□ -2.37
LINC01515-217	ENST00000620859	KRTAP26-1	Q6PEX3	210 aa		0.24	□□□□□ -2.37
LINC01515-217	ENST00000620859	STAG3L4	Q8TBR4	150 aa		0.24	□□□□□ -2.37
LINC01515-217	ENST00000620859	PRAP1	Q96NZ9	151 aa		0.24	□□□□□ -2.37
LINC01515-217	ENST00000620859	KRTAP2-1	Q9BYU5	128 aa		0.24	□□□□□ -2.37
LINC01515-217	ENST00000620859	PBOV1	Q9GZY1	135 aa		0.24	□□□□□ -2.37
LINC01515-217	ENST00000620859	TMEM138	Q9NPI0	162 aa		0.24	□□□□□ -2.37
LINC01515-217	ENST00000620859	NIT2	Q9NQR4	276 aa		0.24	□□□□□ -2.37
LINC01515-217	ENST00000620859	HSPB8	Q9UJY1	196 aa		0.24	□□□□□ -2.37
LINC01515-217	ENST00000620859	FANCM	Q8IYD8	2048 aa		0.24	□□□□□ -2.37
LINC01515-217	ENST00000620859	DOCK4	Q8N1I0	1966 aa		0.24	□□□□□ -2.37
LINC01515-217	ENST00000620859	FAT3	Q8TDW7	4589 aa		0.24	□□□□□ -2.37
LINC01515-217	ENST00000620859	C5orf42	Q9H799	3197 aa		0.23	□□□□□ -2.37
LINC01515-217	ENST00000620859	ZFYVE9	O95405	1425 aa		0.23	□□□□□ -2.37
LINC01515-217	ENST00000620859	DNAH12	Q6ZR08	3092 aa		0.23	□□□□□ -2.37
LINC01515-217	ENST00000620859		A0A087WSZ3	146 aa		0.23	□□□□□ -2.37
LINC01515-217	ENST00000620859	FAM159B	A6NKW6	160 aa		0.23	□□□□□ -2.37
LINC01515-217	ENST00000620859	TAX1BP3	O14907	124 aa		0.23	□□□□□ -2.37
LINC01515-217	ENST00000620859	KLF7	O75840	302 aa	Predicted RBP	0.23	□□□□□ -2.37
LINC01515-217	ENST00000620859	HOXA6	P31267	233 aa		0.23	□□□□□ -2.37
LINC01515-217	ENST00000620859	ATP5G3	P48201	142 aa		0.23	□□□□□ -2.37
LINC01515-217	ENST00000620859	DEFA3	P59666	94 aa		0.23	□□□□□ -2.37
LINC01515-217	ENST00000620859	CDK6	Q00534	326 aa		0.23	□□□□□ -2.37
LINC01515-217	ENST00000620859	GOLT1A	Q6ZVE7	132 aa		0.23	□□□□□ -2.37
LINC01515-217	ENST00000620859	OR5AS1	Q8N127	324 aa		0.23	□□□□□ -2.37
LINC01515-217	ENST00000620859	OR10X1	Q8NGY0	326 aa		0.23	□□□□□ -2.37
LINC01515-217	ENST00000620859	MUCL1	Q96DR8	90 aa		0.23	□□□□□ -2.37
LINC01515-217	ENST00000620859	UCK1	Q9HA47	277 aa		0.23	□□□□□ -2.37
LINC01515-217	ENST00000620859	MED29	Q9NX70	200 aa		0.23	□□□□□ -2.37
LINC01515-217	ENST00000620859	OR52A1	Q9UKL2	312 aa		0.23	□□□□□ -2.37
LINC01515-217	ENST00000620859	ARL2BP	Q9Y2Y0	163 aa		0.23	□□□□□ -2.37
LINC01515-217	ENST00000620859	FAM32A	Q9Y421	112 aa	Known RBP	0.23	□□□□□ -2.37
LINC01515-217	ENST00000620859	PHRF1	Q9P1Y6	1649 aa	Known RBP	0.23	□□□□□ -2.37
LINC01515-217	ENST00000620859	TACC2	O95359	2948 aa		0.23	□□□□□ -2.37
LINC01515-217	ENST00000620859	DMXL2	Q8TDJ6	3036 aa		0.22	□□□□□ -2.37
LINC01515-217	ENST00000620859	MKI67	P46013	3256 aa	Known RBP	0.22	□□□□□ -2.37
LINC01515-217	ENST00000620859	TPR	P12270	2363 aa	Known RBP	0.22	□□□□□ -2.37

Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms