RNA–Protein interactions for RNA: ENST00000620770.1

MUC1-229, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-229ENST00000620770 A0A087X0K7 114 aa10.04□□□□□ -0.8
MUC1-229ENST00000620770 H3BQ15 152 aa10.04□□□□□ -0.8
MUC1-229ENST00000620770 SOCS3O14543 225 aa10.04□□□□□ -0.8
MUC1-229ENST00000620770 IGLC2P0DOY2 106 aa10.04□□□□□ -0.8
MUC1-229ENST00000620770 IGHV4-30-4P0DP06 118 aa10.04□□□□□ -0.8
MUC1-229ENST00000620770 PSMB3P49720 205 aa10.04□□□□□ -0.8
MUC1-229ENST00000620770 TAS2R45P59539 299 aa10.04□□□□□ -0.8
MUC1-229ENST00000620770 UBE2L3P68036 154 aaKnown RBP10.04□□□□□ -0.8
MUC1-229ENST00000620770 BAP18Q8IXM2 172 aa10.04□□□□□ -0.8
MUC1-229ENST00000620770 RPP25LQ8N5L8 163 aaKnown RBP10.04□□□□□ -0.8
MUC1-229ENST00000620770 RNF182Q8N6D2 247 aa10.04□□□□□ -0.8
MUC1-229ENST00000620770 FAM167A-AS1Q96KT0 104 aa10.04□□□□□ -0.8
MUC1-229ENST00000620770 PAXXQ9BUH6 204 aa10.04□□□□□ -0.8
MUC1-229ENST00000620770 ACTR3CQ9C0K3 210 aaPredicted RBP10.04□□□□□ -0.8
MUC1-229ENST00000620770 RPRMQ9NS64 109 aa10.04□□□□□ -0.8
MUC1-229ENST00000620770 C19orf73Q9NVV2 129 aa10.04□□□□□ -0.8
MUC1-229ENST00000620770 TMEM14CQ9P0S9 112 aa10.04□□□□□ -0.8
MUC1-229ENST00000620770 BOLA1Q9Y3E2 137 aa10.04□□□□□ -0.8
MUC1-229ENST00000620770 COL7A1Q02388 2944 aa10.03□□□□□ -0.8
MUC1-229ENST00000620770 SLC17A3O00476 420 aa10.03□□□□□ -0.8
MUC1-229ENST00000620770 PRB4P10163 310 aaPredicted RBP10.03□□□□□ -0.8
MUC1-229ENST00000620770 HLA-DMBP28068 263 aa10.03□□□□□ -0.8
MUC1-229ENST00000620770 DEFB1P60022 68 aa10.03□□□□□ -0.8
MUC1-229ENST00000620770 LCN15Q6UWW0 184 aa10.03□□□□□ -0.8
MUC1-229ENST00000620770 STOML3Q8TAV4 291 aa10.03□□□□□ -0.8
MUC1-229ENST00000620770 RAB24Q969Q5 203 aa10.03□□□□□ -0.8
MUC1-229ENST00000620770 B9D2Q9BPU9 175 aa10.03□□□□□ -0.8
MUC1-229ENST00000620770 OR51M1Q9H341 326 aa10.03□□□□□ -0.8
MUC1-229ENST00000620770 HRH4Q9H3N8 390 aa10.03□□□□□ -0.8
MUC1-229ENST00000620770 ZNF586Q9NXT0 402 aa10.03□□□□□ -0.8
MUC1-229ENST00000620770 TRAV8-2A0A0B4J237 113 aa10.02□□□□□ -0.81
MUC1-229ENST00000620770 KNCNA6PVL3 124 aa10.02□□□□□ -0.81
MUC1-229ENST00000620770 ISLRO14498 428 aa10.02□□□□□ -0.81
MUC1-229ENST00000620770 SEC11BP0C7V7 166 aa10.02□□□□□ -0.81
MUC1-229ENST00000620770 CMC4P56277 68 aaPredicted RBP10.02□□□□□ -0.81
MUC1-229ENST00000620770 SAMD13Q5VXD3 122 aa10.02□□□□□ -0.81
MUC1-229ENST00000620770 SSX7Q7RTT5 188 aa10.02□□□□□ -0.81
MUC1-229ENST00000620770 SLC51BQ86UW2 128 aa10.02□□□□□ -0.81
MUC1-229ENST00000620770 IQCF2Q8IXL9 164 aa10.02□□□□□ -0.81
MUC1-229ENST00000620770 ZNF738Q8NE65 137 aa10.02□□□□□ -0.81
MUC1-229ENST00000620770 RNF141Q8WVD5 230 aa10.02□□□□□ -0.81
MUC1-229ENST00000620770 FXYD5Q96DB9 178 aa10.02□□□□□ -0.81
MUC1-229ENST00000620770 C20orf173Q96LM9 149 aa10.02□□□□□ -0.81
MUC1-229ENST00000620770 CITED4Q96RK1 184 aa10.02□□□□□ -0.81
MUC1-229ENST00000620770 FRMD6-AS1P0C7T7 363 aa10.01□□□□□ -0.81
MUC1-229ENST00000620770 ARL14EPLP0DKL9 152 aa10.01□□□□□ -0.81
MUC1-229ENST00000620770 HIST1H1EP10412 219 aaKnown RBP10.01□□□□□ -0.81
MUC1-229ENST00000620770 FHITP49789 147 aa10.01□□□□□ -0.81
MUC1-229ENST00000620770 ZNF726P1Q15940 193 aa10.01□□□□□ -0.81
MUC1-229ENST00000620770 GUK1Q16774 197 aa10.01□□□□□ -0.81
MUC1-229ENST00000620770 ACTL10Q5JWF8 245 aa10.01□□□□□ -0.81
MUC1-229ENST00000620770 FAM213BQ8TBF2 198 aa10.01□□□□□ -0.81
MUC1-229ENST00000620770 ZNF503Q96F45 646 aa10.01□□□□□ -0.81
MUC1-229ENST00000620770 FAM110AQ9BQ89 295 aa10.01□□□□□ -0.81
MUC1-229ENST00000620770 SLC50A1Q9BRV3 221 aa10.01□□□□□ -0.81
MUC1-229ENST00000620770 PLA2G2EQ9NZK7 142 aa10.01□□□□□ -0.81
MUC1-229ENST00000620770 DNAH9Q9NYC9 4486 aa10.01□□□□□ -0.81
MUC1-229ENST00000620770 TRBV19A0A075B6N1 114 aa10□□□□□ -0.81
MUC1-229ENST00000620770 CTXND1A0A1B0GTU2 59 aa10□□□□□ -0.81
MUC1-229ENST00000620770 NBEAP1P0C6P0 100 aa10□□□□□ -0.81
MUC1-229ENST00000620770 RPL35AP18077 110 aaKnown RBP10□□□□□ -0.81
MUC1-229ENST00000620770 EIF5AL1Q6IS14 154 aaKnown RBP10□□□□□ -0.81
MUC1-229ENST00000620770 PHYHIPLQ96FC7 376 aa10□□□□□ -0.81
MUC1-229ENST00000620770 ZNF331Q9NQX6 463 aaPredicted RBP10□□□□□ -0.81
MUC1-229ENST00000620770 MAP1LC3B2A6NCE7 125 aa9.99□□□□□ -0.81
MUC1-229ENST00000620770 RBMY1BA6NDE4 496 aaKnown RBP9.99□□□□□ -0.81
MUC1-229ENST00000620770 RBMY1EA6NEQ0 496 aaKnown RBP9.99□□□□□ -0.81
MUC1-229ENST00000620770 UMAD1C9J7I0 102 aa9.99□□□□□ -0.81
MUC1-229ENST00000620770 F6UB75 175 aa9.99□□□□□ -0.81
MUC1-229ENST00000620770 RBMY1DP0C7P1 496 aaKnown RBP9.99□□□□□ -0.81
MUC1-229ENST00000620770 STAG3L2P0CL84 134 aa9.99□□□□□ -0.81
MUC1-229ENST00000620770 STAG3L3P0CL85 134 aa9.99□□□□□ -0.81
MUC1-229ENST00000620770 GCHFRP30047 84 aa9.99□□□□□ -0.81
MUC1-229ENST00000620770 FGF8P55075 233 aaPredicted RBP9.99□□□□□ -0.81
MUC1-229ENST00000620770 PQLC2Q6ZP29 291 aa9.99□□□□□ -0.81
MUC1-229ENST00000620770 STHQ8IWL8 128 aa9.99□□□□□ -0.81
MUC1-229ENST00000620770 ASCL2Q99929 193 aa9.99□□□□□ -0.81
MUC1-229ENST00000620770 MAP1LC3BQ9GZQ8 125 aa9.99□□□□□ -0.81
MUC1-229ENST00000620770 A0A1B0GV50 99 aa9.98□□□□□ -0.81
MUC1-229ENST00000620770 NDUFB4O95168 129 aa9.98□□□□□ -0.81
MUC1-229ENST00000620770 CXorf1O96002 111 aa9.98□□□□□ -0.81
MUC1-229ENST00000620770 IGKV3-20P01619 116 aa9.98□□□□□ -0.81
MUC1-229ENST00000620770 FAM74A1Q5RGS3 127 aa9.98□□□□□ -0.81
MUC1-229ENST00000620770 GDF5OSQ5U4N7 250 aa9.98□□□□□ -0.81
MUC1-229ENST00000620770 EXOC3-AS1Q8N2X6 119 aa9.98□□□□□ -0.81
MUC1-229ENST00000620770 SAT2Q96F10 170 aaPredicted RBP9.98□□□□□ -0.81
MUC1-229ENST00000620770 LOC102724200A0A096LPH7 203 aaPredicted RBP9.97□□□□□ -0.81
MUC1-229ENST00000620770 ZNF705FA8MVS1 300 aaPredicted RBP9.97□□□□□ -0.81
MUC1-229ENST00000620770 ZNF253O75346 499 aa9.97□□□□□ -0.81
MUC1-229ENST00000620770 ZNF705DP0CH99 300 aaPredicted RBP9.97□□□□□ -0.81
MUC1-229ENST00000620770 ZNF705BP0CI00 300 aaPredicted RBP9.97□□□□□ -0.81
MUC1-229ENST00000620770 RANP62826 216 aaKnown RBP9.97□□□□□ -0.81
MUC1-229ENST00000620770 PSG9Q00887 426 aa9.97□□□□□ -0.81
MUC1-229ENST00000620770 PDE6HQ13956 83 aa9.97□□□□□ -0.81
MUC1-229ENST00000620770 ICAM4Q14773 271 aa9.97□□□□□ -0.81
MUC1-229ENST00000620770 PSG3Q16557 428 aa9.97□□□□□ -0.81
MUC1-229ENST00000620770 EBLN2Q6P2I7 272 aa9.97□□□□□ -0.81
MUC1-229ENST00000620770 ALKAL2Q6UX46 152 aa9.97□□□□□ -0.81
MUC1-229ENST00000620770 FOXI2Q6ZQN5 318 aa9.97□□□□□ -0.81
MUC1-229ENST00000620770 RPUSD4Q96CM3 377 aaKnown RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms