RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 SMRP1Q8NCR6 262 aa4.09□□□□□ -1.75
VPS13D-214ENST00000620676 PLXNA1Q9UIW2 1896 aa4.09□□□□□ -1.75
VPS13D-214ENST00000620676 TCRBV4S1A1TA0A5B7 111 aa4.09□□□□□ -1.76
VPS13D-214ENST00000620676 IL15RAQ13261 267 aa4.09□□□□□ -1.76
VPS13D-214ENST00000620676 TEX49A0A1B0GTD5 131 aa4.09□□□□□ -1.76
VPS13D-214ENST00000620676 J3KT08 172 aa4.09□□□□□ -1.76
VPS13D-214ENST00000620676 CLPSP04118 112 aa4.09□□□□□ -1.76
VPS13D-214ENST00000620676 EFNA4P52798 201 aa4.09□□□□□ -1.76
VPS13D-214ENST00000620676 IGHV5-10-1A0A0J9YXX1 117 aa4.09□□□□□ -1.76
VPS13D-214ENST00000620676 CARD19Q96LW7 228 aa4.09□□□□□ -1.76
VPS13D-214ENST00000620676 MCM3APO60318 1980 aa4.09□□□□□ -1.76
VPS13D-214ENST00000620676 KLF5Q13887 457 aaPredicted RBP4.09□□□□□ -1.76
VPS13D-214ENST00000620676 TRPM6Q9BX84 2022 aa4.09□□□□□ -1.76
VPS13D-214ENST00000620676 C2CD4DB7Z1M9 353 aa4.08□□□□□ -1.76
VPS13D-214ENST00000620676 ASIPP42127 132 aa4.08□□□□□ -1.76
VPS13D-214ENST00000620676 FAM236AA0A1B0GUQ0 79 aa4.08□□□□□ -1.76
VPS13D-214ENST00000620676 FAM236BA0A1B0GV22 79 aa4.08□□□□□ -1.76
VPS13D-214ENST00000620676 CFHR1Q03591 330 aa4.08□□□□□ -1.76
VPS13D-214ENST00000620676 NAV3Q8IVL0 2385 aa4.08□□□□□ -1.76
VPS13D-214ENST00000620676 PSPNO60542 156 aa4.08□□□□□ -1.76
VPS13D-214ENST00000620676 LYPD6Q86Y78 171 aa4.08□□□□□ -1.76
VPS13D-214ENST00000620676 ATP1A1-AS1Q5TC04 95 aa4.08□□□□□ -1.76
VPS13D-214ENST00000620676 C17orf77Q96MU5 243 aa4.08□□□□□ -1.76
VPS13D-214ENST00000620676 SLC25A15Q9Y619 301 aa4.08□□□□□ -1.76
VPS13D-214ENST00000620676 C21orf140B9A014 251 aa4.08□□□□□ -1.76
VPS13D-214ENST00000620676 LINC00158P58513 81 aa4.08□□□□□ -1.76
VPS13D-214ENST00000620676 RBM3P98179 157 aaKnown RBP4.08□□□□□ -1.76
VPS13D-214ENST00000620676 CD28P10747 220 aa4.08□□□□□ -1.76
VPS13D-214ENST00000620676 CLEC19AQ6UXS0 136 aa4.08□□□□□ -1.76
VPS13D-214ENST00000620676 CLEC2BQ92478 149 aa4.08□□□□□ -1.76
VPS13D-214ENST00000620676 CNTFRP26992 372 aa4.08□□□□□ -1.76
VPS13D-214ENST00000620676 FOXF2Q12947 444 aa4.08□□□□□ -1.76
VPS13D-214ENST00000620676 OR11H6Q8NGC7 330 aa4.08□□□□□ -1.76
VPS13D-214ENST00000620676 COL11A1P12107 1806 aaPredicted RBP4.08□□□□□ -1.76
VPS13D-214ENST00000620676 RNF152Q8N8N0 203 aa4.08□□□□□ -1.76
VPS13D-214ENST00000620676 ZNF576Q9H609 170 aa4.08□□□□□ -1.76
VPS13D-214ENST00000620676 MOB4Q9Y3A3 225 aa4.08□□□□□ -1.76
VPS13D-214ENST00000620676 MYLKQ15746 1914 aa4.08□□□□□ -1.76
VPS13D-214ENST00000620676 C15orf61A6NNL5 157 aa4.08□□□□□ -1.76
VPS13D-214ENST00000620676 FOXG1P55316 489 aaPredicted RBP4.08□□□□□ -1.76
VPS13D-214ENST00000620676 ARID2Q68CP9 1835 aa4.08□□□□□ -1.76
VPS13D-214ENST00000620676 MGST3O14880 152 aa4.08□□□□□ -1.76
VPS13D-214ENST00000620676 C5orf47Q569G3 176 aa4.08□□□□□ -1.76
VPS13D-214ENST00000620676 DOCK8Q8NF50 2099 aa4.07□□□□□ -1.76
VPS13D-214ENST00000620676 DAD1P61803 113 aa4.07□□□□□ -1.76
VPS13D-214ENST00000620676 GATD1Q8NB37 220 aa4.07□□□□□ -1.76
VPS13D-214ENST00000620676 LINC00527Q9UJ94 153 aa4.07□□□□□ -1.76
VPS13D-214ENST00000620676 PARP14Q460N5 1801 aa4.07□□□□□ -1.76
VPS13D-214ENST00000620676 LILRA5A6NI73 299 aa4.07□□□□□ -1.76
VPS13D-214ENST00000620676 ROS1P08922 2347 aa4.07□□□□□ -1.76
VPS13D-214ENST00000620676 FAM214BQ7L5A3 538 aa4.07□□□□□ -1.76
VPS13D-214ENST00000620676 FAM90A10PA6NDY2 464 aa4.07□□□□□ -1.76
VPS13D-214ENST00000620676 FAM90A18PA6NE21 464 aa4.07□□□□□ -1.76
VPS13D-214ENST00000620676 FAM90A16PA6NEW6 464 aa4.07□□□□□ -1.76
VPS13D-214ENST00000620676 FAM90A8PA6NJQ4 464 aa4.07□□□□□ -1.76
VPS13D-214ENST00000620676 FAM90A7PA6NKC0 464 aa4.07□□□□□ -1.76
VPS13D-214ENST00000620676 FAM90A22PA8MWA6 464 aa4.07□□□□□ -1.76
VPS13D-214ENST00000620676 FAM90A12PA8MX19 464 aa4.07□□□□□ -1.76
VPS13D-214ENST00000620676 FAM90A5PA8MXJ8 464 aa4.07□□□□□ -1.76
VPS13D-214ENST00000620676 FAM90A23PA8MXZ1 464 aa4.07□□□□□ -1.76
VPS13D-214ENST00000620676 NPFFO15130 113 aa4.07□□□□□ -1.76
VPS13D-214ENST00000620676 NPYP01303 97 aa4.07□□□□□ -1.76
VPS13D-214ENST00000620676 FAM90A15PP0C7V4 464 aa4.07□□□□□ -1.76
VPS13D-214ENST00000620676 FAM90A13PP0C7W8 464 aa4.07□□□□□ -1.76
VPS13D-214ENST00000620676 FAM90A14PP0C7W9 464 aa4.07□□□□□ -1.76
VPS13D-214ENST00000620676 FAM90A24PP0C7X0 464 aa4.07□□□□□ -1.76
VPS13D-214ENST00000620676 WFDC11Q8NEX6 87 aa4.07□□□□□ -1.76
VPS13D-214ENST00000620676 SP9P0CG40 484 aa4.07□□□□□ -1.76
VPS13D-214ENST00000620676 CD69Q07108 199 aa4.07□□□□□ -1.76
VPS13D-214ENST00000620676 ORMDL2Q53FV1 153 aa4.07□□□□□ -1.76
VPS13D-214ENST00000620676 LOXL1Q08397 574 aaPredicted RBP4.07□□□□□ -1.76
VPS13D-214ENST00000620676 SS18L1O75177 396 aaPredicted RBP4.07□□□□□ -1.76
VPS13D-214ENST00000620676 FREM3P0C091 2139 aa4.07□□□□□ -1.76
VPS13D-214ENST00000620676 BRK1Q8WUW1 75 aa4.07□□□□□ -1.76
VPS13D-214ENST00000620676 ZNF747Q9BV97 191 aa4.07□□□□□ -1.76
VPS13D-214ENST00000620676 MYOFQ9NZM1 2061 aa4.07□□□□□ -1.76
VPS13D-214ENST00000620676 KIF26BQ2KJY2 2108 aa4.07□□□□□ -1.76
VPS13D-214ENST00000620676 LOC107984640A0A0U1RRK4 108 aa4.07□□□□□ -1.76
VPS13D-214ENST00000620676 LAMTOR5O43504 91 aa4.07□□□□□ -1.76
VPS13D-214ENST00000620676 IFI6P09912 130 aa4.07□□□□□ -1.76
VPS13D-214ENST00000620676 DUTP33316 252 aaKnown RBP4.07□□□□□ -1.76
VPS13D-214ENST00000620676 TTTY12Q9BZ98 90 aa4.07□□□□□ -1.76
VPS13D-214ENST00000620676 IGKV1-16P04430 117 aa4.07□□□□□ -1.76
VPS13D-214ENST00000620676 ZNF236Q9UL36 1845 aa4.07□□□□□ -1.76
VPS13D-214ENST00000620676 DAND5Q8N907 189 aa4.07□□□□□ -1.76
VPS13D-214ENST00000620676 PRO1854Q9UHT4 67 aa4.07□□□□□ -1.76
VPS13D-214ENST00000620676 TRAV17A0A0B4J275 112 aa4.07□□□□□ -1.76
VPS13D-214ENST00000620676 TRBV25-1A0A075B6N4 114 aa4.07□□□□□ -1.76
VPS13D-214ENST00000620676 HOXD3P31249 432 aaPredicted RBP4.07□□□□□ -1.76
VPS13D-214ENST00000620676 TNFRSF18Q9Y5U5 241 aa4.07□□□□□ -1.76
VPS13D-214ENST00000620676 WDR90Q96KV7 1748 aa4.07□□□□□ -1.76
VPS13D-214ENST00000620676 M0R1W7 72 aa4.07□□□□□ -1.76
VPS13D-214ENST00000620676 CD7P09564 240 aa4.07□□□□□ -1.76
VPS13D-214ENST00000620676 RPL32P62910 135 aaKnown RBP4.07□□□□□ -1.76
VPS13D-214ENST00000620676 TMEM243Q9BU79 118 aa4.07□□□□□ -1.76
VPS13D-214ENST00000620676 BRCA1P38398 1863 aaKnown RBP4.06□□□□□ -1.76
VPS13D-214ENST00000620676 NACAE9PAV3 2078 aa4.06□□□□□ -1.76
VPS13D-214ENST00000620676 HAX1O00165 279 aa4.06□□□□□ -1.76
VPS13D-214ENST00000620676 NSUN5P1Q3KNT7 163 aa4.06□□□□□ -1.76
VPS13D-214ENST00000620676 TMEM75Q8N9X5 138 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms