RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 PPP1R2P9O14990 202 aa12.93□□□□□ -0.34
TRAPPC3-210ENST00000617904 ZNF253O75346 499 aa12.93□□□□□ -0.34
TRAPPC3-210ENST00000617904 CRYBB3P26998 211 aa12.93□□□□□ -0.34
TRAPPC3-210ENST00000617904 GNG4P50150 75 aa12.93□□□□□ -0.34
TRAPPC3-210ENST00000617904 ADIRFQ15847 76 aa12.93□□□□□ -0.34
TRAPPC3-210ENST00000617904 ARL6IP6Q8N6S5 226 aa12.93□□□□□ -0.34
TRAPPC3-210ENST00000617904 KLHDC1Q8N7A1 406 aa12.93□□□□□ -0.34
TRAPPC3-210ENST00000617904 Q9H3A6 140 aa12.93□□□□□ -0.34
TRAPPC3-210ENST00000617904 BIN3Q9NQY0 253 aa12.93□□□□□ -0.34
TRAPPC3-210ENST00000617904 TRBV19A0A075B6N1 114 aa12.92□□□□□ -0.34
TRAPPC3-210ENST00000617904 IGHV3-35A0A0C4DH35 117 aa12.92□□□□□ -0.34
TRAPPC3-210ENST00000617904 ZNF320A2RRD8 509 aa12.92□□□□□ -0.34
TRAPPC3-210ENST00000617904 GGTLC3B5MD39 225 aa12.92□□□□□ -0.34
TRAPPC3-210ENST00000617904 K7EMT4 169 aa12.92□□□□□ -0.34
TRAPPC3-210ENST00000617904 BTN1A1Q13410 526 aa12.92□□□□□ -0.34
TRAPPC3-210ENST00000617904 GPHB5Q86YW7 130 aa12.92□□□□□ -0.34
TRAPPC3-210ENST00000617904 SLC50A1Q9BRV3 221 aa12.92□□□□□ -0.34
TRAPPC3-210ENST00000617904 ZNF747Q9BV97 191 aa12.92□□□□□ -0.34
TRAPPC3-210ENST00000617904 EPDR1Q9UM22 224 aa12.92□□□□□ -0.34
TRAPPC3-210ENST00000617904 FBLL1A6NHQ2 334 aaKnown RBP12.91□□□□□ -0.34
TRAPPC3-210ENST00000617904 PEX7O00628 323 aa12.91□□□□□ -0.34
TRAPPC3-210ENST00000617904 IGLC2P0DOY2 106 aa12.91□□□□□ -0.34
TRAPPC3-210ENST00000617904 SAMD13Q5VXD3 122 aa12.91□□□□□ -0.34
TRAPPC3-210ENST00000617904 Q6ZSV7 163 aa12.91□□□□□ -0.34
TRAPPC3-210ENST00000617904 ANAPC16Q96DE5 110 aa12.91□□□□□ -0.34
TRAPPC3-210ENST00000617904 ATG101Q9BSB4 218 aa12.91□□□□□ -0.34
TRAPPC3-210ENST00000617904 C16orf95Q9H693 158 aa12.91□□□□□ -0.34
TRAPPC3-210ENST00000617904 SERTAD4Q9NUC0 356 aa12.91□□□□□ -0.34
TRAPPC3-210ENST00000617904 MGAM2Q2M2H8 2515 aa12.91□□□□□ -0.34
TRAPPC3-210ENST00000617904 CXorf65A6NEN9 183 aa12.9□□□□□ -0.34
TRAPPC3-210ENST00000617904 M0QZ24 198 aa12.9□□□□□ -0.34
TRAPPC3-210ENST00000617904 BUB3O43684 328 aa12.9□□□□□ -0.34
TRAPPC3-210ENST00000617904 RPLP1P05386 114 aaKnown RBP12.9□□□□□ -0.34
TRAPPC3-210ENST00000617904 FOXL1Q12952 345 aa12.9□□□□□ -0.34
TRAPPC3-210ENST00000617904 PRR31Q5SQ13 230 aa12.9□□□□□ -0.34
TRAPPC3-210ENST00000617904 DPF1Q92782 380 aa12.9□□□□□ -0.34
TRAPPC3-210ENST00000617904 SMIM12Q96EX1 92 aa12.9□□□□□ -0.34
TRAPPC3-210ENST00000617904 FMC1Q96HJ9 113 aa12.9□□□□□ -0.34
TRAPPC3-210ENST00000617904 ZNF414Q96IQ9 312 aa12.9□□□□□ -0.34
TRAPPC3-210ENST00000617904 TUBA4BQ9H853 241 aa12.9□□□□□ -0.34
TRAPPC3-210ENST00000617904 DAZ1Q9NQZ3 744 aaKnown RBP12.9□□□□□ -0.34
TRAPPC3-210ENST00000617904 TMEM242Q9NWH2 141 aa12.9□□□□□ -0.34
TRAPPC3-210ENST00000617904 ZNF586Q9NXT0 402 aa12.9□□□□□ -0.34
TRAPPC3-210ENST00000617904 A0A087X0K7 114 aa12.89□□□□□ -0.35
TRAPPC3-210ENST00000617904 SCO1O75880 301 aa12.89□□□□□ -0.35
TRAPPC3-210ENST00000617904 S100PP25815 95 aa12.89□□□□□ -0.35
TRAPPC3-210ENST00000617904 RPL35P42766 123 aaKnown RBP12.89□□□□□ -0.35
TRAPPC3-210ENST00000617904 CDX1P47902 265 aaPredicted RBP12.89□□□□□ -0.35
TRAPPC3-210ENST00000617904 KHDC1LQ5JSQ8 128 aa12.89□□□□□ -0.35
TRAPPC3-210ENST00000617904 MYOZ3Q8TDC0 251 aa12.89□□□□□ -0.35
TRAPPC3-210ENST00000617904 OR5B12Q96R08 314 aa12.89□□□□□ -0.35
TRAPPC3-210ENST00000617904 NDUFA7O95182 113 aa12.88□□□□□ -0.35
TRAPPC3-210ENST00000617904 RPL23P62829 140 aaKnown RBP12.88□□□□□ -0.35
TRAPPC3-210ENST00000617904 ATRAIDQ6UW56 229 aa12.88□□□□□ -0.35
TRAPPC3-210ENST00000617904 SHISA2Q6UWI4 295 aa12.88□□□□□ -0.35
TRAPPC3-210ENST00000617904 C15orf54Q8N8G6 183 aa12.88□□□□□ -0.35
TRAPPC3-210ENST00000617904 BTF3L4Q96K17 158 aa12.88□□□□□ -0.35
TRAPPC3-210ENST00000617904 MYCNOSP40205 109 aa12.88□□□□□ -0.35
TRAPPC3-210ENST00000617904 RPL19P84098 196 aaKnown RBP12.88□□□□□ -0.35
TRAPPC3-210ENST00000617904 SIGLEC15Q6ZMC9 328 aa12.88□□□□□ -0.35
TRAPPC3-210ENST00000617904 LCNL1Q6ZST4 164 aa12.88□□□□□ -0.35
TRAPPC3-210ENST00000617904 C2CD4CQ8TF44 421 aa12.88□□□□□ -0.35
TRAPPC3-210ENST00000617904 C4orf3Q8WVX3 66 aa12.88□□□□□ -0.35
TRAPPC3-210ENST00000617904 RPH3ALQ9UNE2 315 aa12.88□□□□□ -0.35
TRAPPC3-210ENST00000617904 U3KQE9 123 aa12.88□□□□□ -0.35
TRAPPC3-210ENST00000617904 TRRAPQ9Y4A5 3859 aa12.87□□□□□ -0.35
TRAPPC3-210ENST00000617904 H7BYZ3 331 aa12.87□□□□□ -0.35
TRAPPC3-210ENST00000617904 LGALS9O00182 355 aa12.87□□□□□ -0.35
TRAPPC3-210ENST00000617904 TSPAN4O14817 238 aa12.87□□□□□ -0.35
TRAPPC3-210ENST00000617904 MRPS12O15235 138 aaKnown RBP12.87□□□□□ -0.35
TRAPPC3-210ENST00000617904 TCRAP04437 139 aa12.87□□□□□ -0.35
TRAPPC3-210ENST00000617904 TMEM183BQ1AE95 376 aa12.87□□□□□ -0.35
TRAPPC3-210ENST00000617904 CENPWQ5EE01 88 aa12.87□□□□□ -0.35
TRAPPC3-210ENST00000617904 KCNIP4Q6PIL6 250 aa12.87□□□□□ -0.35
TRAPPC3-210ENST00000617904 C16orf54Q6UWD8 224 aa12.87□□□□□ -0.35
TRAPPC3-210ENST00000617904 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC3-210ENST00000617904 PEMTQ9UBM1 199 aa12.87□□□□□ -0.35
TRAPPC3-210ENST00000617904 IGHV3OR16-8A0A075B7F1 116 aa12.86□□□□□ -0.35
TRAPPC3-210ENST00000617904 IGHV7-4-1A0A0J9YVY3 117 aa12.86□□□□□ -0.35
TRAPPC3-210ENST00000617904 TRBV12-3P01733 135 aa12.86□□□□□ -0.35
TRAPPC3-210ENST00000617904 REC114Q7Z4M0 266 aa12.86□□□□□ -0.35
TRAPPC3-210ENST00000617904 LINC01551Q86U37 167 aa12.86□□□□□ -0.35
TRAPPC3-210ENST00000617904 BAGE2Q86Y30 109 aa12.86□□□□□ -0.35
TRAPPC3-210ENST00000617904 C1QL4Q86Z23 238 aa12.86□□□□□ -0.35
TRAPPC3-210ENST00000617904 A0A1B0GUS0 222 aa12.85□□□□□ -0.35
TRAPPC3-210ENST00000617904 CLPSL1A2RUU4 121 aa12.85□□□□□ -0.35
TRAPPC3-210ENST00000617904 LINC01619G3V211 115 aa12.85□□□□□ -0.35
TRAPPC3-210ENST00000617904 H3BTX0 84 aa12.85□□□□□ -0.35
TRAPPC3-210ENST00000617904 ZNF207O43670 478 aaKnown RBP12.85□□□□□ -0.35
TRAPPC3-210ENST00000617904 DERL1Q9BUN8 251 aa12.85□□□□□ -0.35
TRAPPC3-210ENST00000617904 MEGF8Q7Z7M0 2845 aa12.84□□□□□ -0.35
TRAPPC3-210ENST00000617904 TRBV6-1A0A0K0K1D8 114 aa12.84□□□□□ -0.35
TRAPPC3-210ENST00000617904 DNASE2O00115 360 aaPredicted RBP12.84□□□□□ -0.35
TRAPPC3-210ENST00000617904 SNRPCP09234 159 aaKnown RBP12.84□□□□□ -0.35
TRAPPC3-210ENST00000617904 RPL11P62913 178 aaKnown RBP12.84□□□□□ -0.35
TRAPPC3-210ENST00000617904 TMEM88Q6PEY1 159 aa12.84□□□□□ -0.35
TRAPPC3-210ENST00000617904 EXOC3-AS1Q8N2X6 119 aa12.84□□□□□ -0.35
TRAPPC3-210ENST00000617904 TMEM75Q8N9X5 138 aa12.84□□□□□ -0.35
TRAPPC3-210ENST00000617904 ISOC2Q96AB3 205 aa12.84□□□□□ -0.35
TRAPPC3-210ENST00000617904 MRPL53Q96EL3 112 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms