RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 TMEM50BP56557 158 aa6.59□□□□□ -1.35
GPC6-202ENST00000617456 TAS2R31P59538 309 aa6.59□□□□□ -1.35
GPC6-202ENST00000617456 RHOBP62745 196 aa6.59□□□□□ -1.35
GPC6-202ENST00000617456 HLA-DRB3P79483 266 aa6.59□□□□□ -1.35
GPC6-202ENST00000617456 PSG9Q00887 426 aa6.59□□□□□ -1.35
GPC6-202ENST00000617456 SSBP1Q04837 148 aaKnown RBP6.59□□□□□ -1.35
GPC6-202ENST00000617456 INSL4Q14641 139 aa6.59□□□□□ -1.35
GPC6-202ENST00000617456 C19orf54Q5BKX5 351 aa6.59□□□□□ -1.35
GPC6-202ENST00000617456 ASPHD1Q5U4P2 390 aa6.59□□□□□ -1.35
GPC6-202ENST00000617456 AMMECR1LQ6DCA0 310 aa6.59□□□□□ -1.35
GPC6-202ENST00000617456 Q6ZS49 121 aa6.59□□□□□ -1.35
GPC6-202ENST00000617456 ZNF491Q8N8L2 437 aa6.59□□□□□ -1.35
GPC6-202ENST00000617456 UBALD1Q8TB05 177 aa6.59□□□□□ -1.35
GPC6-202ENST00000617456 IL1F10Q8WWZ1 152 aa6.59□□□□□ -1.35
GPC6-202ENST00000617456 FAM3DQ96BQ1 224 aa6.59□□□□□ -1.35
GPC6-202ENST00000617456 RBMXL1Q96E39 390 aaKnown RBP6.59□□□□□ -1.35
GPC6-202ENST00000617456 AQP10Q96PS8 301 aa6.59□□□□□ -1.35
GPC6-202ENST00000617456 MRPL20Q9BYC9 149 aaKnown RBP6.59□□□□□ -1.35
GPC6-202ENST00000617456 GNB4Q9HAV0 340 aa6.59□□□□□ -1.35
GPC6-202ENST00000617456 FBXL17Q9UF56 701 aa6.59□□□□□ -1.35
GPC6-202ENST00000617456 WASHC3Q9Y3C0 194 aa6.59□□□□□ -1.35
GPC6-202ENST00000617456 A0A0A6YYD4 124 aa6.58□□□□□ -1.36
GPC6-202ENST00000617456 A0A1B0GX51 115 aa6.58□□□□□ -1.36
GPC6-202ENST00000617456 GAGE12JA6NER3 117 aa6.58□□□□□ -1.36
GPC6-202ENST00000617456 F5H768 121 aa6.58□□□□□ -1.36
GPC6-202ENST00000617456 H0YJW9 148 aa6.58□□□□□ -1.36
GPC6-202ENST00000617456 H3BUA1 57 aa6.58□□□□□ -1.36
GPC6-202ENST00000617456 OVOL1O14753 267 aa6.58□□□□□ -1.36
GPC6-202ENST00000617456 SOCS1O15524 211 aa6.58□□□□□ -1.36
GPC6-202ENST00000617456 GAGE7O76087 117 aa6.58□□□□□ -1.36
GPC6-202ENST00000617456 JTBO76095 146 aa6.58□□□□□ -1.36
GPC6-202ENST00000617456 HSPB1P04792 205 aaKnown RBP6.58□□□□□ -1.36
GPC6-202ENST00000617456 GAGE12FP0CL80 117 aa6.58□□□□□ -1.36
GPC6-202ENST00000617456 GAGE12GP0CL81 117 aa6.58□□□□□ -1.36
GPC6-202ENST00000617456 GAGE12IP0CL82 117 aa6.58□□□□□ -1.36
GPC6-202ENST00000617456 EVI2AP22794 236 aa6.58□□□□□ -1.36
GPC6-202ENST00000617456 NPY1RP25929 384 aa6.58□□□□□ -1.36
GPC6-202ENST00000617456 GNB1P62873 340 aa6.58□□□□□ -1.36
GPC6-202ENST00000617456 CYCSP99999 105 aaKnown RBP6.58□□□□□ -1.36
GPC6-202ENST00000617456 GAGE4Q13068 117 aa6.58□□□□□ -1.36
GPC6-202ENST00000617456 ZNF266Q14584 549 aa6.58□□□□□ -1.36
GPC6-202ENST00000617456 Q6ZN92 141 aa6.58□□□□□ -1.36
GPC6-202ENST00000617456 ZNF429Q86V71 674 aa6.58□□□□□ -1.36
GPC6-202ENST00000617456 PDPNQ86YL7 162 aa6.58□□□□□ -1.36
GPC6-202ENST00000617456 TTC9CQ8N5M4 171 aa6.58□□□□□ -1.36
GPC6-202ENST00000617456 BLNKQ8WV28 456 aa6.58□□□□□ -1.36
GPC6-202ENST00000617456 TMED6Q8WW62 240 aa6.58□□□□□ -1.36
GPC6-202ENST00000617456 UHRF2Q96PU4 802 aa6.58□□□□□ -1.36
GPC6-202ENST00000617456 GFI1Q99684 422 aa6.58□□□□□ -1.36
GPC6-202ENST00000617456 C1QTNF4Q9BXJ3 329 aa6.58□□□□□ -1.36
GPC6-202ENST00000617456 KLK15Q9H2R5 256 aa6.58□□□□□ -1.36
GPC6-202ENST00000617456 PPDPFQ9H3Y8 114 aa6.58□□□□□ -1.36
GPC6-202ENST00000617456 EDA2RQ9HAV5 297 aa6.58□□□□□ -1.36
GPC6-202ENST00000617456 AK3Q9UIJ7 227 aa6.58□□□□□ -1.36
GPC6-202ENST00000617456 CYSLTR1Q9Y271 337 aa6.58□□□□□ -1.36
GPC6-202ENST00000617456 TNCP24821 2201 aa6.57□□□□□ -1.36
GPC6-202ENST00000617456 GAGE10A6NGK3 116 aa6.57□□□□□ -1.36
GPC6-202ENST00000617456 K7EP34 96 aa6.57□□□□□ -1.36
GPC6-202ENST00000617456 ATP6V0E1O15342 81 aa6.57□□□□□ -1.36
GPC6-202ENST00000617456 SLURP1P55000 103 aa6.57□□□□□ -1.36
GPC6-202ENST00000617456 CX3CL1P78423 397 aa6.57□□□□□ -1.36
GPC6-202ENST00000617456 ACTL10Q5JWF8 245 aa6.57□□□□□ -1.36
GPC6-202ENST00000617456 SPATA31B1PQ5VZV4 182 aa6.57□□□□□ -1.36
GPC6-202ENST00000617456 HAPLN4Q86UW8 402 aa6.57□□□□□ -1.36
GPC6-202ENST00000617456 OR10G9Q8NGN4 311 aa6.57□□□□□ -1.36
GPC6-202ENST00000617456 ZNRF2Q8NHG8 242 aa6.57□□□□□ -1.36
GPC6-202ENST00000617456 DLX4Q92988 240 aaPredicted RBP6.57□□□□□ -1.36
GPC6-202ENST00000617456 ARHGAP5-AS1Q96IT6 56 aa6.57□□□□□ -1.36
GPC6-202ENST00000617456 ADTRPQ96IZ2 230 aa6.57□□□□□ -1.36
GPC6-202ENST00000617456 RITA1Q96K30 269 aa6.57□□□□□ -1.36
GPC6-202ENST00000617456 TM2D3Q9BRN9 247 aa6.57□□□□□ -1.36
GPC6-202ENST00000617456 PECRQ9BY49 303 aa6.57□□□□□ -1.36
GPC6-202ENST00000617456 PARLQ9H300 379 aa6.57□□□□□ -1.36
GPC6-202ENST00000617456 NPVFQ9HCQ7 196 aa6.57□□□□□ -1.36
GPC6-202ENST00000617456 FOXA2Q9Y261 457 aaPredicted RBP6.57□□□□□ -1.36
GPC6-202ENST00000617456 WSB1Q9Y6I7 421 aa6.57□□□□□ -1.36
GPC6-202ENST00000617456 MAP1LC3B2A6NCE7 125 aa6.56□□□□□ -1.36
GPC6-202ENST00000617456 MSGN1A6NI15 193 aa6.56□□□□□ -1.36
GPC6-202ENST00000617456 FABP5P3A8MUU1 101 aa6.56□□□□□ -1.36
GPC6-202ENST00000617456 B5MCH6 92 aa6.56□□□□□ -1.36
GPC6-202ENST00000617456 ST8SIA3O43173 380 aa6.56□□□□□ -1.36
GPC6-202ENST00000617456 PROP1O75360 226 aa6.56□□□□□ -1.36
GPC6-202ENST00000617456 HLA-AP01891 365 aaKnown RBP6.56□□□□□ -1.36
GPC6-202ENST00000617456 APOA2P02652 100 aa6.56□□□□□ -1.36
GPC6-202ENST00000617456 PFN1P07737 140 aaKnown RBP6.56□□□□□ -1.36
GPC6-202ENST00000617456 IGHV4-30-4P0DP06 118 aa6.56□□□□□ -1.36
GPC6-202ENST00000617456 HIST1H1DP16402 221 aaKnown RBP6.56□□□□□ -1.36
GPC6-202ENST00000617456 TPPP2P59282 170 aa6.56□□□□□ -1.36
GPC6-202ENST00000617456 SUMO1P63165 101 aaKnown RBP6.56□□□□□ -1.36
GPC6-202ENST00000617456 TMEM97Q5BJF2 176 aa6.56□□□□□ -1.36
GPC6-202ENST00000617456 ADAD2Q8NCV1 583 aaKnown RBP6.56□□□□□ -1.36
GPC6-202ENST00000617456 ARPC1AQ92747 370 aa6.56□□□□□ -1.36
GPC6-202ENST00000617456 FLYWCH2Q96CP2 140 aaKnown RBP6.56□□□□□ -1.36
GPC6-202ENST00000617456 SAMD10Q9BYL1 202 aa6.56□□□□□ -1.36
GPC6-202ENST00000617456 MAP1LC3BQ9GZQ8 125 aa6.56□□□□□ -1.36
GPC6-202ENST00000617456 WDR61Q9GZS3 305 aaKnown RBP6.56□□□□□ -1.36
GPC6-202ENST00000617456 A0A0G2JLM5 398 aa6.55□□□□□ -1.36
GPC6-202ENST00000617456 A6NDN8 102 aa6.55□□□□□ -1.36
GPC6-202ENST00000617456 A8MZ25 164 aa6.55□□□□□ -1.36
GPC6-202ENST00000617456 LINC01619G3V211 115 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms