RNA–Protein interactions for RNA: ENST00000616701.4

SEMA3B-212, Transcript of semaphorin 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-212ENST00000616701 LYZP61626 148 aa12.3□□□□□ -0.44
SEMA3B-212ENST00000616701 KCNIP4Q6PIL6 250 aa12.3□□□□□ -0.44
SEMA3B-212ENST00000616701 TMEM116Q8NCL8 245 aa12.3□□□□□ -0.44
SEMA3B-212ENST00000616701 LINC00479Q96M42 142 aa12.3□□□□□ -0.44
SEMA3B-212ENST00000616701 MRPL32Q9BYC8 188 aaKnown RBP12.3□□□□□ -0.44
SEMA3B-212ENST00000616701 K7EN84 100 aa12.3□□□□□ -0.44
SEMA3B-212ENST00000616701 NUDT3O95989 172 aa12.3□□□□□ -0.44
SEMA3B-212ENST00000616701 IGHV3-23P01764 117 aa12.3□□□□□ -0.44
SEMA3B-212ENST00000616701 RPS20P60866 119 aaKnown RBP12.3□□□□□ -0.44
SEMA3B-212ENST00000616701 PVRIGQ6DKI7 326 aa12.3□□□□□ -0.44
SEMA3B-212ENST00000616701 CCDC144NLQ6NUI1 221 aa12.3□□□□□ -0.44
SEMA3B-212ENST00000616701 C19orf24Q9BVV8 132 aa12.3□□□□□ -0.44
SEMA3B-212ENST00000616701 MUC21A0A0G2JKD1 596 aa12.29□□□□□ -0.44
SEMA3B-212ENST00000616701 MUC21A0A140T8X8 626 aa12.29□□□□□ -0.44
SEMA3B-212ENST00000616701 PMCHP20382 165 aa12.29□□□□□ -0.44
SEMA3B-212ENST00000616701 MUC21Q5SSG8 566 aa12.29□□□□□ -0.44
SEMA3B-212ENST00000616701 KLHDC1Q8N7A1 406 aa12.29□□□□□ -0.44
SEMA3B-212ENST00000616701 PERPQ96FX8 193 aa12.29□□□□□ -0.44
SEMA3B-212ENST00000616701 TXNDC17Q9BRA2 123 aa12.29□□□□□ -0.44
SEMA3B-212ENST00000616701 POLQO75417 2590 aa12.29□□□□□ -0.44
SEMA3B-212ENST00000616701 LRRK2Q5S007 2527 aa12.29□□□□□ -0.44
SEMA3B-212ENST00000616701 ID1P41134 155 aa12.29□□□□□ -0.44
SEMA3B-212ENST00000616701 LCN12Q6JVE5 192 aa12.29□□□□□ -0.44
SEMA3B-212ENST00000616701 NHLRC2Q8NBF2 726 aa12.29□□□□□ -0.44
SEMA3B-212ENST00000616701 FAM168AQ92567 244 aa12.29□□□□□ -0.44
SEMA3B-212ENST00000616701 TRGV9Q99603 122 aa12.29□□□□□ -0.44
SEMA3B-212ENST00000616701 MRPS16Q9Y3D3 137 aaKnown RBP12.29□□□□□ -0.44
SEMA3B-212ENST00000616701 MDFIC2A0A1B0GVS7 189 aa12.28□□□□□ -0.44
SEMA3B-212ENST00000616701 A1L4Q6 167 aa12.28□□□□□ -0.44
SEMA3B-212ENST00000616701 K7EIM0 57 aa12.28□□□□□ -0.44
SEMA3B-212ENST00000616701 ATP5J2P56134 94 aa12.28□□□□□ -0.44
SEMA3B-212ENST00000616701 PIP4P2Q8N4L2 257 aa12.28□□□□□ -0.44
SEMA3B-212ENST00000616701 AJUBAQ96IF1 538 aa12.28□□□□□ -0.44
SEMA3B-212ENST00000616701 TP53TG3Q9ULZ0 132 aa12.28□□□□□ -0.44
SEMA3B-212ENST00000616701 SLC17A3O00476 420 aa12.28□□□□□ -0.44
SEMA3B-212ENST00000616701 SIVA1O15304 175 aa12.28□□□□□ -0.44
SEMA3B-212ENST00000616701 IGLC1P0CG04 106 aa12.28□□□□□ -0.44
SEMA3B-212ENST00000616701 PLP1P60201 277 aa12.28□□□□□ -0.44
SEMA3B-212ENST00000616701 CENPWQ5EE01 88 aa12.28□□□□□ -0.44
SEMA3B-212ENST00000616701 MINOS1Q5TGZ0 78 aa12.28□□□□□ -0.44
SEMA3B-212ENST00000616701 ARPC1AQ92747 370 aa12.28□□□□□ -0.44
SEMA3B-212ENST00000616701 SGK494Q96LW2 274 aa12.28□□□□□ -0.44
SEMA3B-212ENST00000616701 MINOS1-NBL1R4GNA1 71 aa12.28□□□□□ -0.44
SEMA3B-212ENST00000616701 HELTA6NFD8 242 aa12.27□□□□□ -0.44
SEMA3B-212ENST00000616701 UBE2E1P51965 193 aa12.27□□□□□ -0.44
SEMA3B-212ENST00000616701 GNG5P63218 68 aa12.27□□□□□ -0.44
SEMA3B-212ENST00000616701 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.27□□□□□ -0.45
SEMA3B-212ENST00000616701 LINC00310P59036 64 aa12.27□□□□□ -0.45
SEMA3B-212ENST00000616701 FXYD5Q96DB9 178 aa12.27□□□□□ -0.45
SEMA3B-212ENST00000616701 PRR31Q5SQ13 230 aa12.27□□□□□ -0.45
SEMA3B-212ENST00000616701 BRD3OSQ6XYD6 125 aa12.27□□□□□ -0.45
SEMA3B-212ENST00000616701 C11orf52Q96A22 123 aa12.27□□□□□ -0.45
SEMA3B-212ENST00000616701 RASL11BQ9BPW5 248 aa12.27□□□□□ -0.45
SEMA3B-212ENST00000616701 SOX21Q9Y651 276 aaPredicted RBP12.27□□□□□ -0.45
SEMA3B-212ENST00000616701 IGHV4-30-2A0A087WSY4 118 aa12.26□□□□□ -0.45
SEMA3B-212ENST00000616701 CRISP2P16562 243 aa12.26□□□□□ -0.45
SEMA3B-212ENST00000616701 GTF2H5Q6ZYL4 71 aa12.26□□□□□ -0.45
SEMA3B-212ENST00000616701 Q8N6K4 173 aa12.26□□□□□ -0.45
SEMA3B-212ENST00000616701 Q8N976 141 aa12.26□□□□□ -0.45
SEMA3B-212ENST00000616701 MRPL27Q9P0M9 148 aaKnown RBP12.26□□□□□ -0.45
SEMA3B-212ENST00000616701 FBLL1A6NHQ2 334 aaKnown RBP12.26□□□□□ -0.45
SEMA3B-212ENST00000616701 IGKV1-17P01599 117 aa12.26□□□□□ -0.45
SEMA3B-212ENST00000616701 AMTP48728 403 aa12.26□□□□□ -0.45
SEMA3B-212ENST00000616701 GNG4P50150 75 aa12.26□□□□□ -0.45
SEMA3B-212ENST00000616701 PIMREGQ9BSJ6 248 aa12.26□□□□□ -0.45
SEMA3B-212ENST00000616701 CENPVL3A0A0U1RRI6 287 aa12.25□□□□□ -0.45
SEMA3B-212ENST00000616701 ZNF562Q6V9R5 426 aa12.25□□□□□ -0.45
SEMA3B-212ENST00000616701 A0A1W2PRE2 83 aa12.25□□□□□ -0.45
SEMA3B-212ENST00000616701 NPFFO15130 113 aa12.25□□□□□ -0.45
SEMA3B-212ENST00000616701 MGST1P10620 155 aaKnown RBP12.25□□□□□ -0.45
SEMA3B-212ENST00000616701 TMEM219Q86XT9 240 aa12.25□□□□□ -0.45
SEMA3B-212ENST00000616701 OR10G8Q8NGN5 311 aa12.25□□□□□ -0.45
SEMA3B-212ENST00000616701 SGMS2Q8NHU3 365 aa12.25□□□□□ -0.45
SEMA3B-212ENST00000616701 FANCD2OSQ96PS1 177 aa12.25□□□□□ -0.45
SEMA3B-212ENST00000616701 CDC42EP3Q9UKI2 254 aa12.25□□□□□ -0.45
SEMA3B-212ENST00000616701 OR2J3O76001 311 aa12.24□□□□□ -0.45
SEMA3B-212ENST00000616701 BCL6BQ8N143 479 aaPredicted RBP12.24□□□□□ -0.45
SEMA3B-212ENST00000616701 Q8N9W7 124 aa12.24□□□□□ -0.45
SEMA3B-212ENST00000616701 RNASE7Q9H1E1 156 aaKnown RBP12.24□□□□□ -0.45
SEMA3B-212ENST00000616701 IGHV7-81A0A0B4J1V7 117 aa12.24□□□□□ -0.45
SEMA3B-212ENST00000616701 FAM106CPP0CH98 169 aa12.24□□□□□ -0.45
SEMA3B-212ENST00000616701 ECSCRQ19T08 205 aa12.24□□□□□ -0.45
SEMA3B-212ENST00000616701 SMIM20Q8N5G0 67 aa12.24□□□□□ -0.45
SEMA3B-212ENST00000616701 OR4F17Q8NGA8 305 aa12.24□□□□□ -0.45
SEMA3B-212ENST00000616701 SRSF8Q9BRL6 282 aaKnown RBP12.24□□□□□ -0.45
SEMA3B-212ENST00000616701 TRBV7-9A0A0J9YWB2 115 aa12.24□□□□□ -0.45
SEMA3B-212ENST00000616701 LINC01548A6NM66 108 aa12.24□□□□□ -0.45
SEMA3B-212ENST00000616701 CBLN1P23435 193 aa12.24□□□□□ -0.45
SEMA3B-212ENST00000616701 ZNF329Q86UD4 541 aa12.24□□□□□ -0.45
SEMA3B-212ENST00000616701 C10orf105Q8TEF2 133 aa12.24□□□□□ -0.45
SEMA3B-212ENST00000616701 HIGD1AQ9Y241 93 aa12.24□□□□□ -0.45
SEMA3B-212ENST00000616701 TRAV40A0A0B4J280 105 aa12.23□□□□□ -0.45
SEMA3B-212ENST00000616701 OOSP1A8MZH6 123 aa12.23□□□□□ -0.45
SEMA3B-212ENST00000616701 NTF3P20783 257 aa12.23□□□□□ -0.45
SEMA3B-212ENST00000616701 TSSC4Q9Y5U2 329 aaPredicted RBP12.23□□□□□ -0.45
SEMA3B-212ENST00000616701 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.23□□□□□ -0.458e-13■■■□□ 14.6
SEMA3B-212ENST00000616701 IGHV3-35A0A0C4DH35 117 aa12.23□□□□□ -0.45
SEMA3B-212ENST00000616701 EGR2P11161 476 aaPredicted RBP12.23□□□□□ -0.45
SEMA3B-212ENST00000616701 IGHV3OR16-8A0A075B7F1 116 aa12.22□□□□□ -0.45
SEMA3B-212ENST00000616701 PGPA6NDG6 321 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms