RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-231ENST00000616390 PAX2Q02962 417 aa11.02□□□□□ -0.65
CACNA1C-231ENST00000616390 C8orf46Q8TAG6 207 aa11.02□□□□□ -0.65
CACNA1C-231ENST00000616390 NDUFS7O75251 213 aa11.01□□□□□ -0.65
CACNA1C-231ENST00000616390 IGHV3-23P01764 117 aa11.01□□□□□ -0.65
CACNA1C-231ENST00000616390 PAFAH1B2P68402 229 aa11.01□□□□□ -0.65
CACNA1C-231ENST00000616390 C5orf47Q569G3 176 aa11.01□□□□□ -0.65
CACNA1C-231ENST00000616390 C17orf77Q96MU5 243 aa11.01□□□□□ -0.65
CACNA1C-231ENST00000616390 TRBV9A0A0B4J1U6 114 aa11.01□□□□□ -0.65
CACNA1C-231ENST00000616390 IGLC1P0CG04 106 aa11.01□□□□□ -0.65
CACNA1C-231ENST00000616390 TIMD4Q96H15 378 aa11.01□□□□□ -0.65
CACNA1C-231ENST00000616390 COL25A1Q9BXS0 654 aaPredicted RBP11.01□□□□□ -0.65
CACNA1C-231ENST00000616390 F8WDY8 70 aa11□□□□□ -0.65
CACNA1C-231ENST00000616390 K7EQM0 130 aa11□□□□□ -0.65
CACNA1C-231ENST00000616390 GP9P14770 177 aa11□□□□□ -0.65
CACNA1C-231ENST00000616390 TMEM183BQ1AE95 376 aa11□□□□□ -0.65
CACNA1C-231ENST00000616390 GDF5OSQ5U4N7 250 aa11□□□□□ -0.65
CACNA1C-231ENST00000616390 SLC25A39Q9BZJ4 359 aaPredicted RBP11□□□□□ -0.65
CACNA1C-231ENST00000616390 DPM3Q9P2X0 92 aa11□□□□□ -0.65
CACNA1C-231ENST00000616390 HLA-DQA1P01909 254 aa11□□□□□ -0.65
CACNA1C-231ENST00000616390 MT-ND6P03923 174 aa11□□□□□ -0.65
CACNA1C-231ENST00000616390 PRNTQ86SH4 94 aa11□□□□□ -0.65
CACNA1C-231ENST00000616390 GRAMD2BQ96HH9 432 aa11□□□□□ -0.65
CACNA1C-231ENST00000616390 FBXL7Q9UJT9 491 aa11□□□□□ -0.65
CACNA1C-231ENST00000616390 I3L2K1 104 aa10.99□□□□□ -0.65
CACNA1C-231ENST00000616390 MYCNOSP40205 109 aa10.99□□□□□ -0.65
CACNA1C-231ENST00000616390 Q0VG73 95 aa10.99□□□□□ -0.65
CACNA1C-231ENST00000616390 KLRB1Q12918 225 aa10.99□□□□□ -0.65
CACNA1C-231ENST00000616390 LY6DQ14210 128 aa10.99□□□□□ -0.65
CACNA1C-231ENST00000616390 GOLT1AQ6ZVE7 132 aa10.99□□□□□ -0.65
CACNA1C-231ENST00000616390 CIARTQ8N365 385 aaPredicted RBP10.99□□□□□ -0.65
CACNA1C-231ENST00000616390 MTURNQ8N3F0 131 aa10.99□□□□□ -0.65
CACNA1C-231ENST00000616390 ZNF586Q9NXT0 402 aa10.99□□□□□ -0.65
CACNA1C-231ENST00000616390 A0A1W2PS18 150 aa10.99□□□□□ -0.65
CACNA1C-231ENST00000616390 VWC2LB2RUY7 222 aa10.99□□□□□ -0.65
CACNA1C-231ENST00000616390 LY6LH3BQJ8 138 aa10.99□□□□□ -0.65
CACNA1C-231ENST00000616390 GPX1P07203 203 aa10.99□□□□□ -0.65
CACNA1C-231ENST00000616390 HIST1H1EP10412 219 aaKnown RBP10.99□□□□□ -0.65
CACNA1C-231ENST00000616390 RHOGP84095 191 aa10.99□□□□□ -0.65
CACNA1C-231ENST00000616390 BCL6BQ8N143 479 aaPredicted RBP10.99□□□□□ -0.65
CACNA1C-231ENST00000616390 STPG4Q8N801 248 aa10.99□□□□□ -0.65
CACNA1C-231ENST00000616390 PGLYRP4Q96LB8 373 aa10.99□□□□□ -0.65
CACNA1C-231ENST00000616390 GPR82Q96P67 336 aa10.99□□□□□ -0.65
CACNA1C-231ENST00000616390 NBR2O15453 112 aa10.99□□□□□ -0.65
CACNA1C-231ENST00000616390 TCRAP04437 139 aa10.99□□□□□ -0.65
CACNA1C-231ENST00000616390 NRN1Q9NPD7 142 aa10.99□□□□□ -0.65
CACNA1C-231ENST00000616390 TSSC4Q9Y5U2 329 aaPredicted RBP10.99□□□□□ -0.65
CACNA1C-231ENST00000616390 IGHV3OR16-8A0A075B7F1 116 aa10.98□□□□□ -0.65
CACNA1C-231ENST00000616390 G3V4G9 280 aa10.98□□□□□ -0.65
CACNA1C-231ENST00000616390 IGKV1-17P01599 117 aa10.98□□□□□ -0.65
CACNA1C-231ENST00000616390 IL4P05112 153 aa10.98□□□□□ -0.65
CACNA1C-231ENST00000616390 RPL32P62910 135 aaKnown RBP10.98□□□□□ -0.65
CACNA1C-231ENST00000616390 C5orf17Q8NAS9 161 aa10.98□□□□□ -0.65
CACNA1C-231ENST00000616390 AZU1P20160 251 aa10.98□□□□□ -0.65
CACNA1C-231ENST00000616390 FCGR2BP31994 310 aaPredicted RBP10.98□□□□□ -0.65
CACNA1C-231ENST00000616390 TCTEX1D4Q5JR98 221 aa10.98□□□□□ -0.65
CACNA1C-231ENST00000616390 OR1N2Q8NGR9 330 aa10.98□□□□□ -0.65
CACNA1C-231ENST00000616390 TMEM160Q9NX00 188 aa10.98□□□□□ -0.65
CACNA1C-231ENST00000616390 ITPR1Q14643 2758 aa10.98□□□□□ -0.65
CACNA1C-231ENST00000616390 IGHV3-35A0A0C4DH35 117 aa10.97□□□□□ -0.65
CACNA1C-231ENST00000616390 K7EIM0 57 aa10.97□□□□□ -0.65
CACNA1C-231ENST00000616390 P01737 135 aa10.97□□□□□ -0.65
CACNA1C-231ENST00000616390 FOXA3P55318 350 aaPredicted RBP10.97□□□□□ -0.65
CACNA1C-231ENST00000616390 DYNAPQ8N1N2 210 aa10.97□□□□□ -0.65
CACNA1C-231ENST00000616390 SMIM20Q8N5G0 67 aa10.97□□□□□ -0.65
CACNA1C-231ENST00000616390 MBD6Q96DN6 1003 aa10.97□□□□□ -0.65
CACNA1C-231ENST00000616390 C20orf144Q9BQM9 153 aa10.97□□□□□ -0.65
CACNA1C-231ENST00000616390 ATOH7Q8N100 152 aa10.97□□□□□ -0.65
CACNA1C-231ENST00000616390 TSKUQ8WUA8 353 aa10.97□□□□□ -0.65
CACNA1C-231ENST00000616390 KCNS1Q96KK3 526 aa10.97□□□□□ -0.65
CACNA1C-231ENST00000616390 DIRC3C9JPN6 131 aa10.96□□□□□ -0.65
CACNA1C-231ENST00000616390 FBXL19-AS1Q494R0 122 aa10.96□□□□□ -0.65
CACNA1C-231ENST00000616390 C18orf32Q8TCD1 76 aa10.96□□□□□ -0.65
CACNA1C-231ENST00000616390 OR10J3Q5JRS4 329 aa10.96□□□□□ -0.66
CACNA1C-231ENST00000616390 PVRIGQ6DKI7 326 aa10.96□□□□□ -0.66
CACNA1C-231ENST00000616390 RNASEKQ6P5S7 137 aaKnown RBP10.96□□□□□ -0.66
CACNA1C-231ENST00000616390 FAM231DQ6ZW35 169 aa10.96□□□□□ -0.66
CACNA1C-231ENST00000616390 LY6G5BQ8NDX9 201 aa10.96□□□□□ -0.66
CACNA1C-231ENST00000616390 VAMP8Q9BV40 100 aa10.96□□□□□ -0.66
CACNA1C-231ENST00000616390 C7orf69Q9H7B7 122 aa10.96□□□□□ -0.66
CACNA1C-231ENST00000616390 A0A1W2PPR1 153 aa10.95□□□□□ -0.66
CACNA1C-231ENST00000616390 ESDP10768 282 aa10.95□□□□□ -0.66
CACNA1C-231ENST00000616390 COL8A1P27658 744 aa10.95□□□□□ -0.66
CACNA1C-231ENST00000616390 VMO1Q7Z5L0 202 aa10.95□□□□□ -0.66
CACNA1C-231ENST00000616390 RPP21Q9H633 154 aaKnown RBP10.95□□□□□ -0.66
CACNA1C-231ENST00000616390 PSG8Q9UQ74 426 aa10.95□□□□□ -0.66
CACNA1C-231ENST00000616390 SPG11Q96JI7 2443 aa10.95□□□□□ -0.66
CACNA1C-231ENST00000616390 ZNF324O75467 553 aaPredicted RBP10.95□□□□□ -0.66
CACNA1C-231ENST00000616390 ZFP36P26651 326 aaKnown RBP10.95□□□□□ -0.66
CACNA1C-231ENST00000616390 PMCHL1Q16048 86 aa10.95□□□□□ -0.66
CACNA1C-231ENST00000616390 Q56UQ5 140 aa10.95□□□□□ -0.66
CACNA1C-231ENST00000616390 GTSF1Q8WW33 167 aa10.95□□□□□ -0.66
CACNA1C-231ENST00000616390 CFHR4Q92496 578 aa10.95□□□□□ -0.66
CACNA1C-231ENST00000616390 FMC1Q96HJ9 113 aa10.95□□□□□ -0.66
CACNA1C-231ENST00000616390 UBTD1Q9HAC8 227 aa10.95□□□□□ -0.66
CACNA1C-231ENST00000616390 TIMM8BQ9Y5J9 83 aaPredicted RBP10.94□□□□□ -0.66
CACNA1C-231ENST00000616390 M0R3E3 92 aa10.94□□□□□ -0.66
CACNA1C-231ENST00000616390 RNF125Q96EQ8 232 aa10.94□□□□□ -0.66
CACNA1C-231ENST00000616390 MLST8Q9BVC4 326 aa10.94□□□□□ -0.66
CACNA1C-231ENST00000616390 KLF12Q9Y4X4 402 aa10.94□□□□□ -0.66
CACNA1C-231ENST00000616390 HSBP1O75506 76 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms